Result of FASTA (omim) for
pF1KA0011
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0011, 911 aa
1>>>pF1KA0011 911 - 911 aa - 911 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.6951+/-0.000371; mu= 1.3367+/- 0.023
mean_var=263.8515+/-54.000, 0's: 0 Z-trim(121.4): 7 B-trim: 0 in 0/59
Lambda= 0.078958
statistics sampled from 37981 (37988) to 37981 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.445), width: 16
Scan time: 15.740
The best scores are: opt bits E(85289)
NP_001512 (OMIM: 604883) general transcription fac ( 911) 6365 739.0 2.4e-212
NP_001030598 (OMIM: 604883) general transcription ( 911) 6365 739.0 2.4e-212
NP_001305838 (OMIM: 604883) general transcription ( 922) 6365 739.0 2.4e-212
XP_005264329 (OMIM: 604883) PREDICTED: general tra ( 950) 6365 739.0 2.5e-212
XP_011531103 (OMIM: 604883) PREDICTED: general tra (1026) 6365 739.1 2.6e-212
>>NP_001512 (OMIM: 604883) general transcription factor (911 aa)
initn: 6365 init1: 6365 opt: 6365 Z-score: 3933.3 bits: 739.0 E(85289): 2.4e-212
Smith-Waterman score: 6365; 100.0% identity (100.0% similar) in 911 aa overlap (1-911:1-911)
10 20 30 40 50 60
pF1KA0 MDTCGVGYVALGEAGPVGNMTVVDSPGQEVLNQLDVKTSSEMTSAEASVEMSLPTPLPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDTCGVGYVALGEAGPVGNMTVVDSPGQEVLNQLDVKTSSEMTSAEASVEMSLPTPLPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 EDSPDQRRLPPEQESLSRLEQPDLSSEMSKVSKPRASKPGRKRGGRTRKGPKRPQQPNPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDSPDQRRLPPEQESLSRLEQPDLSSEMSKVSKPRASKPGRKRGGRTRKGPKRPQQPNPP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 SAPLVPGLLDQSNPLSTPMPKKRGRKSKAELLLLKLSKDLDRPESQSPKRPPEDFETPSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAPLVPGLLDQSNPLSTPMPKKRGRKSKAELLLLKLSKDLDRPESQSPKRPPEDFETPSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 ERPRRRAAQVALLYLQELAEELSTALPAPVSCPEGPKVSSPTKPKKIRQPAACPGGEEVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERPRRRAAQVALLYLQELAEELSTALPAPVSCPEGPKVSSPTKPKKIRQPAACPGGEEVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 GAPRDEDFFLQVEAEDVEESEGPSESSSEPEPVVPRSTPRGSTSGKQKPHCRGMAPNGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAPRDEDFFLQVEAEDVEESEGPSESSSEPEPVVPRSTPRGSTSGKQKPHCRGMAPNGLP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLAWKWHLLSELEAAPYLPQEEKSPLFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLAWKWHLLSELEAAPYLPQEEKSPLFSV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 QREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAGASQYVALFSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAGASQYVALFSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 PDMNETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDNGCIWDLKFCPSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDMNETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDNGCIWDLKFCPSGA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 WELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAVKPAIYKVQCVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAVKPAIYKVQCVAT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LQVGSMQATDPSECGQCLSLAWMPTRPHQHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQVGSMQATDPSECGQCLSLAWMPTRPHQHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 LKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 LAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 AAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLIPYQDSPEGPDHSSASSGVPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLIPYQDSPEGPDHSSASSGVPN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 PPKARTYTETVNHHYLLFQDTDLGSFHDLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPKARTYTETVNHHYLLFQDTDLGSFHDLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKV
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 RFSPNLDSYGWLVSGGQSGLVRIHFVRGLASPLGHRMQLESRAHFNAMFQPSSPTRRPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFSPNLDSYGWLVSGGQSGLVRIHFVRGLASPLGHRMQLESRAHFNAMFQPSSPTRRPGF
850 860 870 880 890 900
910
pF1KA0 SPTSHRLLPTP
:::::::::::
NP_001 SPTSHRLLPTP
910
>>NP_001030598 (OMIM: 604883) general transcription fact (911 aa)
initn: 6365 init1: 6365 opt: 6365 Z-score: 3933.3 bits: 739.0 E(85289): 2.4e-212
Smith-Waterman score: 6365; 100.0% identity (100.0% similar) in 911 aa overlap (1-911:1-911)
10 20 30 40 50 60
pF1KA0 MDTCGVGYVALGEAGPVGNMTVVDSPGQEVLNQLDVKTSSEMTSAEASVEMSLPTPLPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDTCGVGYVALGEAGPVGNMTVVDSPGQEVLNQLDVKTSSEMTSAEASVEMSLPTPLPGF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 EDSPDQRRLPPEQESLSRLEQPDLSSEMSKVSKPRASKPGRKRGGRTRKGPKRPQQPNPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDSPDQRRLPPEQESLSRLEQPDLSSEMSKVSKPRASKPGRKRGGRTRKGPKRPQQPNPP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 SAPLVPGLLDQSNPLSTPMPKKRGRKSKAELLLLKLSKDLDRPESQSPKRPPEDFETPSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAPLVPGLLDQSNPLSTPMPKKRGRKSKAELLLLKLSKDLDRPESQSPKRPPEDFETPSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 ERPRRRAAQVALLYLQELAEELSTALPAPVSCPEGPKVSSPTKPKKIRQPAACPGGEEVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERPRRRAAQVALLYLQELAEELSTALPAPVSCPEGPKVSSPTKPKKIRQPAACPGGEEVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 GAPRDEDFFLQVEAEDVEESEGPSESSSEPEPVVPRSTPRGSTSGKQKPHCRGMAPNGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAPRDEDFFLQVEAEDVEESEGPSESSSEPEPVVPRSTPRGSTSGKQKPHCRGMAPNGLP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLAWKWHLLSELEAAPYLPQEEKSPLFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLAWKWHLLSELEAAPYLPQEEKSPLFSV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 QREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAGASQYVALFSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAGASQYVALFSS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 PDMNETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDNGCIWDLKFCPSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDMNETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDNGCIWDLKFCPSGA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 WELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAVKPAIYKVQCVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAVKPAIYKVQCVAT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LQVGSMQATDPSECGQCLSLAWMPTRPHQHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQVGSMQATDPSECGQCLSLAWMPTRPHQHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 LKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 LAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTI
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 AAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLIPYQDSPEGPDHSSASSGVPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLIPYQDSPEGPDHSSASSGVPN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 PPKARTYTETVNHHYLLFQDTDLGSFHDLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPKARTYTETVNHHYLLFQDTDLGSFHDLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKV
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 RFSPNLDSYGWLVSGGQSGLVRIHFVRGLASPLGHRMQLESRAHFNAMFQPSSPTRRPGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RFSPNLDSYGWLVSGGQSGLVRIHFVRGLASPLGHRMQLESRAHFNAMFQPSSPTRRPGF
850 860 870 880 890 900
910
pF1KA0 SPTSHRLLPTP
:::::::::::
NP_001 SPTSHRLLPTP
910
>>NP_001305838 (OMIM: 604883) general transcription fact (922 aa)
initn: 6365 init1: 6365 opt: 6365 Z-score: 3933.2 bits: 739.0 E(85289): 2.4e-212
Smith-Waterman score: 6365; 100.0% identity (100.0% similar) in 911 aa overlap (1-911:12-922)
10 20 30 40
pF1KA0 MDTCGVGYVALGEAGPVGNMTVVDSPGQEVLNQLDVKTSSEMTSAEASV
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYRGQPFWGVLMDTCGVGYVALGEAGPVGNMTVVDSPGQEVLNQLDVKTSSEMTSAEASV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA0 EMSLPTPLPGFEDSPDQRRLPPEQESLSRLEQPDLSSEMSKVSKPRASKPGRKRGGRTRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMSLPTPLPGFEDSPDQRRLPPEQESLSRLEQPDLSSEMSKVSKPRASKPGRKRGGRTRK
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA0 GPKRPQQPNPPSAPLVPGLLDQSNPLSTPMPKKRGRKSKAELLLLKLSKDLDRPESQSPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPKRPQQPNPPSAPLVPGLLDQSNPLSTPMPKKRGRKSKAELLLLKLSKDLDRPESQSPK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA0 RPPEDFETPSGERPRRRAAQVALLYLQELAEELSTALPAPVSCPEGPKVSSPTKPKKIRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPPEDFETPSGERPRRRAAQVALLYLQELAEELSTALPAPVSCPEGPKVSSPTKPKKIRQ
190 200 210 220 230 240
230 240 250 260 270 280
pF1KA0 PAACPGGEEVDGAPRDEDFFLQVEAEDVEESEGPSESSSEPEPVVPRSTPRGSTSGKQKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAACPGGEEVDGAPRDEDFFLQVEAEDVEESEGPSESSSEPEPVVPRSTPRGSTSGKQKP
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA0 HCRGMAPNGLPNHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLAWKWHLLSELEAAPYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HCRGMAPNGLPNHIMAPVWKCLHLTKDFREQKHSYWEFAEWIPLAWKWHLLSELEAAPYL
310 320 330 340 350 360
350 360 370 380 390 400
pF1KA0 PQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGA
370 380 390 400 410 420
410 420 430 440 450 460
pF1KA0 GASQYVALFSSPDMNETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDNGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GASQYVALFSSPDMNETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDNGC
430 440 450 460 470 480
470 480 490 500 510 520
pF1KA0 IWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAVK
490 500 510 520 530 540
530 540 550 560 570 580
pF1KA0 PAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQHLAAGYYNGMVVFWNLPTNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQHLAAGYYNGMVVFWNLPTNS
550 560 570 580 590 600
590 600 610 620 630 640
pF1KA0 PLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEP
610 620 630 640 650 660
650 660 670 680 690 700
pF1KA0 INSIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INSIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVW
670 680 690 700 710 720
710 720 730 740 750 760
pF1KA0 SLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLIPYQDSPEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVERRFPIYKADLIPYQDSPEGP
730 740 750 760 770 780
770 780 790 800 810 820
pF1KA0 DHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLLRREPMLRMQEGEGHSQLCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLLRREPMLRMQEGEGHSQLCL
790 800 810 820 830 840
830 840 850 860 870 880
pF1KA0 DRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLASPLGHRMQLESRAHFNAMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLASPLGHRMQLESRAHFNAMF
850 860 870 880 890 900
890 900 910
pF1KA0 QPSSPTRRPGFSPTSHRLLPTP
::::::::::::::::::::::
NP_001 QPSSPTRRPGFSPTSHRLLPTP
910 920
>>XP_005264329 (OMIM: 604883) PREDICTED: general transcr (950 aa)
initn: 6365 init1: 6365 opt: 6365 Z-score: 3933.0 bits: 739.0 E(85289): 2.5e-212
Smith-Waterman score: 6365; 100.0% identity (100.0% similar) in 911 aa overlap (1-911:40-950)
10 20 30
pF1KA0 MDTCGVGYVALGEAGPVGNMTVVDSPGQEV
::::::::::::::::::::::::::::::
XP_005 RQNPLKSLLKHKVLAPSRIADSGQPFWGVLMDTCGVGYVALGEAGPVGNMTVVDSPGQEV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 LNQLDVKTSSEMTSAEASVEMSLPTPLPGFEDSPDQRRLPPEQESLSRLEQPDLSSEMSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNQLDVKTSSEMTSAEASVEMSLPTPLPGFEDSPDQRRLPPEQESLSRLEQPDLSSEMSK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 VSKPRASKPGRKRGGRTRKGPKRPQQPNPPSAPLVPGLLDQSNPLSTPMPKKRGRKSKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VSKPRASKPGRKRGGRTRKGPKRPQQPNPPSAPLVPGLLDQSNPLSTPMPKKRGRKSKAE
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA0 LLLLKLSKDLDRPESQSPKRPPEDFETPSGERPRRRAAQVALLYLQELAEELSTALPAPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLLLKLSKDLDRPESQSPKRPPEDFETPSGERPRRRAAQVALLYLQELAEELSTALPAPV
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA0 SCPEGPKVSSPTKPKKIRQPAACPGGEEVDGAPRDEDFFLQVEAEDVEESEGPSESSSEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCPEGPKVSSPTKPKKIRQPAACPGGEEVDGAPRDEDFFLQVEAEDVEESEGPSESSSEP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA0 EPVVPRSTPRGSTSGKQKPHCRGMAPNGLPNHIMAPVWKCLHLTKDFREQKHSYWEFAEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EPVVPRSTPRGSTSGKQKPHCRGMAPNGLPNHIMAPVWKCLHLTKDFREQKHSYWEFAEW
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA0 IPLAWKWHLLSELEAAPYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IPLAWKWHLLSELEAAPYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA0 FFTGGPLWALDWCPVPEGAGASQYVALFSSPDMNETHPLSQLHSGPGLLQLWGLGTLQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFTGGPLWALDWCPVPEGAGASQYVALFSSPDMNETHPLSQLHSGPGLLQLWGLGTLQQE
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA0 SCPGNRAHFVYGIACDNGCIWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCPGNRAHFVYGIACDNGCIWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKVLL
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA0 FSLPHPEALLAQQPPDAVKPAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FSLPHPEALLAQQPPDAVKPAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQH
550 560 570 580 590 600
580 590 600 610 620 630
pF1KA0 LAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLV
610 620 630 640 650 660
640 650 660 670 680 690
pF1KA0 SAGSDRKIKFWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAGSDRKIKFWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYID
670 680 690 700 710 720
700 710 720 730 740 750
pF1KA0 AGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVER
730 740 750 760 770 780
760 770 780 790 800 810
pF1KA0 RFPIYKADLIPYQDSPEGPDHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RFPIYKADLIPYQDSPEGPDHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLL
790 800 810 820 830 840
820 830 840 850 860 870
pF1KA0 RREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLA
850 860 870 880 890 900
880 890 900 910
pF1KA0 SPLGHRMQLESRAHFNAMFQPSSPTRRPGFSPTSHRLLPTP
:::::::::::::::::::::::::::::::::::::::::
XP_005 SPLGHRMQLESRAHFNAMFQPSSPTRRPGFSPTSHRLLPTP
910 920 930 940 950
>>XP_011531103 (OMIM: 604883) PREDICTED: general transcr (1026 aa)
initn: 6365 init1: 6365 opt: 6365 Z-score: 3932.6 bits: 739.1 E(85289): 2.6e-212
Smith-Waterman score: 6365; 100.0% identity (100.0% similar) in 911 aa overlap (1-911:116-1026)
10 20 30
pF1KA0 MDTCGVGYVALGEAGPVGNMTVVDSPGQEV
::::::::::::::::::::::::::::::
XP_011 RQNPLKSLLKHKVLAPSRIADSGQPFWGVLMDTCGVGYVALGEAGPVGNMTVVDSPGQEV
90 100 110 120 130 140
40 50 60 70 80 90
pF1KA0 LNQLDVKTSSEMTSAEASVEMSLPTPLPGFEDSPDQRRLPPEQESLSRLEQPDLSSEMSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LNQLDVKTSSEMTSAEASVEMSLPTPLPGFEDSPDQRRLPPEQESLSRLEQPDLSSEMSK
150 160 170 180 190 200
100 110 120 130 140 150
pF1KA0 VSKPRASKPGRKRGGRTRKGPKRPQQPNPPSAPLVPGLLDQSNPLSTPMPKKRGRKSKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSKPRASKPGRKRGGRTRKGPKRPQQPNPPSAPLVPGLLDQSNPLSTPMPKKRGRKSKAE
210 220 230 240 250 260
160 170 180 190 200 210
pF1KA0 LLLLKLSKDLDRPESQSPKRPPEDFETPSGERPRRRAAQVALLYLQELAEELSTALPAPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLLLKLSKDLDRPESQSPKRPPEDFETPSGERPRRRAAQVALLYLQELAEELSTALPAPV
270 280 290 300 310 320
220 230 240 250 260 270
pF1KA0 SCPEGPKVSSPTKPKKIRQPAACPGGEEVDGAPRDEDFFLQVEAEDVEESEGPSESSSEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCPEGPKVSSPTKPKKIRQPAACPGGEEVDGAPRDEDFFLQVEAEDVEESEGPSESSSEP
330 340 350 360 370 380
280 290 300 310 320 330
pF1KA0 EPVVPRSTPRGSTSGKQKPHCRGMAPNGLPNHIMAPVWKCLHLTKDFREQKHSYWEFAEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPVVPRSTPRGSTSGKQKPHCRGMAPNGLPNHIMAPVWKCLHLTKDFREQKHSYWEFAEW
390 400 410 420 430 440
340 350 360 370 380 390
pF1KA0 IPLAWKWHLLSELEAAPYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPLAWKWHLLSELEAAPYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPERWDVS
450 460 470 480 490 500
400 410 420 430 440 450
pF1KA0 FFTGGPLWALDWCPVPEGAGASQYVALFSSPDMNETHPLSQLHSGPGLLQLWGLGTLQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFTGGPLWALDWCPVPEGAGASQYVALFSSPDMNETHPLSQLHSGPGLLQLWGLGTLQQE
510 520 530 540 550 560
460 470 480 490 500 510
pF1KA0 SCPGNRAHFVYGIACDNGCIWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SCPGNRAHFVYGIACDNGCIWDLKFCPSGAWELPGTPRKAPLLPRLGLLALACSDGKVLL
570 580 590 600 610 620
520 530 540 550 560 570
pF1KA0 FSLPHPEALLAQQPPDAVKPAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSLPHPEALLAQQPPDAVKPAIYKVQCVATLQVGSMQATDPSECGQCLSLAWMPTRPHQH
630 640 650 660 670 680
580 590 600 610 620 630
pF1KA0 LAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTLQWCKANSHFLV
690 700 710 720 730 740
640 650 660 670 680 690
pF1KA0 SAGSDRKIKFWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAGSDRKIKFWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCYASYGLCGIHYID
750 760 770 780 790 800
700 710 720 730 740 750
pF1KA0 AGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVER
810 820 830 840 850 860
760 770 780 790 800 810
pF1KA0 RFPIYKADLIPYQDSPEGPDHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFPIYKADLIPYQDSPEGPDHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLL
870 880 890 900 910 920
820 830 840 850 860 870
pF1KA0 RREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGLVRIHFVRGLA
930 940 950 960 970 980
880 890 900 910
pF1KA0 SPLGHRMQLESRAHFNAMFQPSSPTRRPGFSPTSHRLLPTP
:::::::::::::::::::::::::::::::::::::::::
XP_011 SPLGHRMQLESRAHFNAMFQPSSPTRRPGFSPTSHRLLPTP
990 1000 1010 1020
911 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:19:13 2016 done: Fri Nov 4 00:19:15 2016
Total Scan time: 15.740 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]