Result of FASTA (ccds) for
pF1KA0107
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0107, 389 aa
1>>>pF1KA0107 389 - 389 aa - 389 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9466+/-0.00108; mu= 13.4012+/- 0.065
mean_var=71.2535+/-13.975, 0's: 0 Z-trim(103.2): 33 B-trim: 6 in 1/49
Lambda= 0.151940
statistics sampled from 7274 (7290) to 7274 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.58), E-opt: 0.2 (0.224), width: 16
Scan time: 1.830
The best scores are: opt bits E(32554)
CCDS2901.1 PSMD6 gene_id:9861|Hs108|chr3 ( 389) 2541 566.5 1.5e-161
CCDS63678.1 PSMD6 gene_id:9861|Hs108|chr3 ( 350) 2225 497.2 9.4e-141
CCDS63679.1 PSMD6 gene_id:9861|Hs108|chr3 ( 351) 2221 496.3 1.7e-140
CCDS63677.1 PSMD6 gene_id:9861|Hs108|chr3 ( 442) 2219 495.9 2.9e-140
CCDS82227.1 GPS1 gene_id:2873|Hs108|chr17 ( 486) 349 86.0 7.8e-17
CCDS82225.1 GPS1 gene_id:2873|Hs108|chr17 ( 490) 348 85.8 9.2e-17
CCDS82228.1 GPS1 gene_id:2873|Hs108|chr17 ( 471) 273 69.4 7.9e-12
CCDS82226.1 GPS1 gene_id:2873|Hs108|chr17 ( 487) 273 69.4 8.1e-12
CCDS32774.1 GPS1 gene_id:2873|Hs108|chr17 ( 491) 273 69.4 8.2e-12
CCDS11800.1 GPS1 gene_id:2873|Hs108|chr17 ( 527) 273 69.4 8.7e-12
>>CCDS2901.1 PSMD6 gene_id:9861|Hs108|chr3 (389 aa)
initn: 2541 init1: 2541 opt: 2541 Z-score: 3014.0 bits: 566.5 E(32554): 1.5e-161
Smith-Waterman score: 2541; 100.0% identity (100.0% similar) in 389 aa overlap (1-389:1-389)
10 20 30 40 50 60
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD
310 320 330 340 350 360
370 380
pF1KA0 SKNWQYQETIKKGDLLLNRVQKLSRVINM
:::::::::::::::::::::::::::::
CCDS29 SKNWQYQETIKKGDLLLNRVQKLSRVINM
370 380
>>CCDS63678.1 PSMD6 gene_id:9861|Hs108|chr3 (350 aa)
initn: 2225 init1: 2225 opt: 2225 Z-score: 2640.4 bits: 497.2 E(32554): 9.4e-141
Smith-Waterman score: 2225; 97.7% identity (99.4% similar) in 348 aa overlap (42-389:3-350)
20 30 40 50 60 70
pF1KA0 PKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLN
. .....::::::::::::::::::::::
CCDS63 MPLENLEEEDMAPYYEALCKSLDWQIDVDLLN
10 20 30
80 90 100 110 120 130
pF1KA0 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKT
40 50 60 70 80 90
140 150 160 170 180 190
pF1KA0 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAI
100 110 120 130 140 150
200 210 220 230 240 250
pF1KA0 RDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLH
160 170 180 190 200 210
260 270 280 290 300 310
pF1KA0 SLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESY
220 230 240 250 260 270
320 330 340 350 360 370
pF1KA0 RSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIK
280 290 300 310 320 330
380
pF1KA0 KGDLLLNRVQKLSRVINM
::::::::::::::::::
CCDS63 KGDLLLNRVQKLSRVINM
340 350
>>CCDS63679.1 PSMD6 gene_id:9861|Hs108|chr3 (351 aa)
initn: 2221 init1: 2221 opt: 2221 Z-score: 2635.7 bits: 496.3 E(32554): 1.7e-140
Smith-Waterman score: 2221; 99.7% identity (100.0% similar) in 341 aa overlap (49-389:11-351)
20 30 40 50 60 70
pF1KA0 IAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANE
.:::::::::::::::::::::::::::::
CCDS63 MNESNDSTNYDMAPYYEALCKSLDWQIDVDLLNKMKKANE
10 20 30 40
80 90 100 110 120 130
pF1KA0 DELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRL
50 60 70 80 90 100
140 150 160 170 180 190
pF1KA0 DIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAA
110 120 130 140 150 160
200 210 220 230 240 250
pF1KA0 ELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQ
170 180 190 200 210 220
260 270 280 290 300 310
pF1KA0 YLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGY
230 240 250 260 270 280
320 330 340 350 360 370
pF1KA0 MAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLN
290 300 310 320 330 340
380
pF1KA0 RVQKLSRVINM
:::::::::::
CCDS63 RVQKLSRVINM
350
>>CCDS63677.1 PSMD6 gene_id:9861|Hs108|chr3 (442 aa)
initn: 2527 init1: 2219 opt: 2219 Z-score: 2631.7 bits: 495.9 E(32554): 2.9e-140
Smith-Waterman score: 2284; 87.4% identity (87.4% similar) in 421 aa overlap (22-389:22-442)
10 20 30 40
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNN-----------
::::::::::::::::::::::::::::
CCDS63 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNFWNRIRQEQTE
10 20 30 40 50 60
50 60
pF1KA0 ------------------------------------------MAPYYEALCKSLDWQIDV
::::::::::::::::::
CCDS63 DCPPSSPSRGWHCQDWPSRKPPTSIRLCFAKPIIKRHRMPSYMAPYYEALCKSLDWQIDV
70 80 90 100 110 120
70 80 90 100 110 120
pF1KA0 DLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKT
130 140 150 160 170 180
130 140 150 160 170 180
pF1KA0 YDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLY
190 200 210 220 230 240
190 200 210 220 230 240
pF1KA0 CVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 CVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEIL
250 260 270 280 290 300
250 260 270 280 290 300
pF1KA0 EVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 EVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQL
310 320 330 340 350 360
310 320 330 340 350 360
pF1KA0 LESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQ
370 380 390 400 410 420
370 380
pF1KA0 ETIKKGDLLLNRVQKLSRVINM
::::::::::::::::::::::
CCDS63 ETIKKGDLLLNRVQKLSRVINM
430 440
>>CCDS82227.1 GPS1 gene_id:2873|Hs108|chr17 (486 aa)
initn: 286 init1: 176 opt: 349 Z-score: 415.7 bits: 86.0 E(32554): 7.8e-17
Smith-Waterman score: 371; 23.0% identity (57.4% similar) in 383 aa overlap (15-383:68-448)
10 20 30 40
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDE----
: ::. :.. ::. .. .. . .:
CCDS82 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
40 50 60 70 80 90
50 60 70 80 90
pF1KA0 LMAAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGES
: :.:. . :: .:. .: .:. .. .: .:..:: .:.. . : .
CCDS82 LSEATRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE
100 110 120 130 140 150
100 110 120 130 140 150
pF1KA0 EIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLIT
:: . ... :: .:: . .. : .. : ... . ....... .. . .
CCDS82 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVL
160 170 180 190 200 210
160 170 180 190 200 210
pF1KA0 RNTEKAKSL--IEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFTS
. ::.: : : :. : .. .:: :: .: : .::::. :.: . .
CCDS82 SYVSKAESTPEIAERGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDF
220 230 240 250 260 270
220 230 240 250 260 270
pF1KA0 YELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSV
::.. .. . : .. ...: .:...::... . :. : ::. .:..:: .:.
CCDS82 PELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYAS
280 290 300 310 320 330
280 290 300 310 320 330
pF1KA0 FFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFI
.. : ..... : .::: : ..: .: : . : : . :: ::.. : .
CCDS82 CLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAAL
340 350 360 370 380 390
340 350 360 370 380
pF1KA0 DQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
..::...: : . ..:. ..:. . :... ..... : . :.. .
CCDS82 EDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVL
400 410 420 430 440 450
CCDS82 RNQIHVKSPPREGSQGELTPANSQSRMSTNM
460 470 480
>>CCDS82225.1 GPS1 gene_id:2873|Hs108|chr17 (490 aa)
initn: 286 init1: 176 opt: 348 Z-score: 414.4 bits: 85.8 E(32554): 9.2e-17
Smith-Waterman score: 360; 22.2% identity (57.1% similar) in 387 aa overlap (15-383:68-452)
10 20 30 40
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELM--
: ::. :.. ::. .. .. . .:.
CCDS82 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
40 50 60 70 80 90
50 60 70 80 90
pF1KA0 ------AAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKN
...:. . :: .:. .: .:. .. .: .:..:: .:.. . :
CCDS82 LSEATRSSLRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGN
100 110 120 130 140 150
100 110 120 130 140 150
pF1KA0 LGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDN
. :: . ... :: .:: . .. : .. : ... . ....... ..
CCDS82 SIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNW
160 170 180 190 200 210
160 170 180 190 200
pF1KA0 DLITRNTEKAKSL--IEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVS
. . . ::.: : : :. : .. .:: :: .: : .::::. :.: . .
CCDS82 SHVLSYVSKAESTPEIAERGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFD
220 230 240 250 260 270
210 220 230 240 250 260
pF1KA0 TFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYEC
::.. .. . : .. ...: .:...::... . :. : ::. .:..::
CCDS82 HCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYES
280 290 300 310 320 330
270 280 290 300 310 320
pF1KA0 RYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVG
.:. .. : ..... : .::: : ..: .: : . : : . :: ::..
CCDS82 KYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTT
340 350 360 370 380 390
330 340 350 360 370 380
pF1KA0 VEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRV
: ...::...: : . ..:. ..:. . :... ..... : . :.. .
CCDS82 VAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLR
400 410 420 430 440 450
pF1KA0 INM
CCDS82 AAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM
460 470 480 490
>>CCDS82228.1 GPS1 gene_id:2873|Hs108|chr17 (471 aa)
initn: 286 init1: 176 opt: 273 Z-score: 325.8 bits: 69.4 E(32554): 7.9e-12
Smith-Waterman score: 369; 22.7% identity (57.6% similar) in 384 aa overlap (15-383:52-433)
10 20 30 40
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDE----
: ::. :.. ::. .. .. . .:
CCDS82 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
30 40 50 60 70 80
50 60 70 80 90
pF1KA0 LMAAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGES
: :.:. . :: .:. .: .:. .. .: .:..:: .:.. . : .
CCDS82 LSEATRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE
90 100 110 120 130
100 110 120 130 140 150
pF1KA0 EIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLIT
:: . ... :: .:: . .. : .. : ... . ....... .. . .
CCDS82 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVL
140 150 160 170 180 190
160 170 180 190 200
pF1KA0 RNTEKAKS---LIEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFT
. ::.: . :. :. : .. .:: :: .: : .::::. :.: . .
CCDS82 SYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCD
200 210 220 230 240 250
210 220 230 240 250 260
pF1KA0 SYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYS
::.. .. . : .. ...: .:...::... . :. : ::. .:..:: .:.
CCDS82 FPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYA
260 270 280 290 300 310
270 280 290 300 310 320
pF1KA0 VFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEF
.. : ..... : .::: : ..: .: : . : : . :: ::.. :
CCDS82 SCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAA
320 330 340 350 360 370
330 340 350 360 370 380
pF1KA0 IDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
...::...: : . ..:. ..:. . :... ..... : . :.. .
CCDS82 LEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAV
380 390 400 410 420 430
CCDS82 LRNQIHVKSPPREGSQGELTPANSQSRMSTNM
440 450 460 470
>>CCDS82226.1 GPS1 gene_id:2873|Hs108|chr17 (487 aa)
initn: 286 init1: 176 opt: 273 Z-score: 325.6 bits: 69.4 E(32554): 8.1e-12
Smith-Waterman score: 369; 22.7% identity (57.6% similar) in 384 aa overlap (15-383:68-449)
10 20 30 40
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDE----
: ::. :.. ::. .. .. . .:
CCDS82 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
40 50 60 70 80 90
50 60 70 80 90
pF1KA0 LMAAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGES
: :.:. . :: .:. .: .:. .. .: .:..:: .:.. . : .
CCDS82 LSEATRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE
100 110 120 130 140 150
100 110 120 130 140 150
pF1KA0 EIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLIT
:: . ... :: .:: . .. : .. : ... . ....... .. . .
CCDS82 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVL
160 170 180 190 200 210
160 170 180 190 200
pF1KA0 RNTEKAKS---LIEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFT
. ::.: . :. :. : .. .:: :: .: : .::::. :.: . .
CCDS82 SYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCD
220 230 240 250 260 270
210 220 230 240 250 260
pF1KA0 SYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYS
::.. .. . : .. ...: .:...::... . :. : ::. .:..:: .:.
CCDS82 FPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYA
280 290 300 310 320 330
270 280 290 300 310 320
pF1KA0 VFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEF
.. : ..... : .::: : ..: .: : . : : . :: ::.. :
CCDS82 SCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAA
340 350 360 370 380 390
330 340 350 360 370 380
pF1KA0 IDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
...::...: : . ..:. ..:. . :... ..... : . :.. .
CCDS82 LEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAV
400 410 420 430 440 450
CCDS82 LRNQIHVKSPPREGSQGELTPANSQSRMSTNM
460 470 480
>>CCDS32774.1 GPS1 gene_id:2873|Hs108|chr17 (491 aa)
initn: 286 init1: 176 opt: 273 Z-score: 325.6 bits: 69.4 E(32554): 8.2e-12
Smith-Waterman score: 358; 21.9% identity (57.2% similar) in 388 aa overlap (15-383:68-453)
10 20 30 40
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELM--
: ::. :.. ::. .. .. . .:.
CCDS32 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
40 50 60 70 80 90
50 60 70 80 90
pF1KA0 ------AAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKN
...:. . :: .:. .: .:. .. .: .:..:: .:.. . :
CCDS32 LSEATRSSLRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGN
100 110 120 130 140 150
100 110 120 130 140 150
pF1KA0 LGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDN
. :: . ... :: .:: . .. : .. : ... . ....... ..
CCDS32 SIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNW
160 170 180 190 200 210
160 170 180 190 200
pF1KA0 DLITRNTEKAKS---LIEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTV
. . . ::.: . :. :. : .. .:: :: .: : .::::. :.: .
CCDS32 SHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASF
220 230 240 250 260 270
210 220 230 240 250 260
pF1KA0 STFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYE
. ::.. .. . : .. ...: .:...::... . :. : ::. .:..::
CCDS32 DHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYE
280 290 300 310 320 330
270 280 290 300 310 320
pF1KA0 CRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGV
.:. .. : ..... : .::: : ..: .: : . : : . :: ::..
CCDS32 SKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNT
340 350 360 370 380 390
330 340 350 360 370 380
pF1KA0 GVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSR
: ...::...: : . ..:. ..:. . :... ..... : . :.. .
CCDS32 TVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMML
400 410 420 430 440 450
pF1KA0 VINM
CCDS32 RAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM
460 470 480 490
>>CCDS11800.1 GPS1 gene_id:2873|Hs108|chr17 (527 aa)
initn: 286 init1: 176 opt: 273 Z-score: 325.1 bits: 69.4 E(32554): 8.7e-12
Smith-Waterman score: 369; 22.7% identity (57.6% similar) in 384 aa overlap (15-383:108-489)
10 20 30 40
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDE----
: ::. :.. ::. .. .. . .:
CCDS11 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
80 90 100 110 120 130
50 60 70 80 90
pF1KA0 LMAAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGES
: :.:. . :: .:. .: .:. .. .: .:..:: .:.. . : .
CCDS11 LSEATRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE
140 150 160 170 180 190
100 110 120 130 140 150
pF1KA0 EIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLIT
:: . ... :: .:: . .. : .. : ... . ....... .. . .
CCDS11 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVL
200 210 220 230 240 250
160 170 180 190 200
pF1KA0 RNTEKAKS---LIEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFT
. ::.: . :. :. : .. .:: :: .: : .::::. :.: . .
CCDS11 SYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCD
260 270 280 290 300 310
210 220 230 240 250 260
pF1KA0 SYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYS
::.. .. . : .. ...: .:...::... . :. : ::. .:..:: .:.
CCDS11 FPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYA
320 330 340 350 360 370
270 280 290 300 310 320
pF1KA0 VFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEF
.. : ..... : .::: : ..: .: : . : : . :: ::.. :
CCDS11 SCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAA
380 390 400 410 420 430
330 340 350 360 370 380
pF1KA0 IDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
...::...: : . ..:. ..:. . :... ..... : . :.. .
CCDS11 LEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAV
440 450 460 470 480 490
CCDS11 LRNQIHVKSPPREGSQGELTPANSQSRMSTNM
500 510 520
389 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:28:57 2016 done: Fri Nov 4 00:28:58 2016
Total Scan time: 1.830 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]