Result of FASTA (omim) for
pF1KA0138
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0138, 953 aa
1>>>pF1KA0138 953 - 953 aa - 953 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.6388+/-0.000496; mu= 1.3697+/- 0.031
mean_var=623.4302+/-123.195, 0's: 0 Z-trim(122.4): 139 B-trim: 0 in 0/60
Lambda= 0.051367
statistics sampled from 40298 (40460) to 40298 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.765), E-opt: 0.2 (0.474), width: 16
Scan time: 14.910
The best scores are: opt bits E(85289)
NP_055464 (OMIM: 608066) scaffold attachment facto ( 953) 6418 491.8 6.9e-138
XP_011526751 (OMIM: 608066) PREDICTED: scaffold at ( 902) 6025 462.6 3.9e-129
XP_016883009 (OMIM: 608066) PREDICTED: scaffold at ( 499) 3477 273.4 2e-72
XP_011526752 (OMIM: 608066) PREDICTED: scaffold at ( 499) 3477 273.4 2e-72
XP_016883011 (OMIM: 608066) PREDICTED: scaffold at ( 499) 3477 273.4 2e-72
XP_016883010 (OMIM: 608066) PREDICTED: scaffold at ( 499) 3477 273.4 2e-72
NP_001188267 (OMIM: 602895) scaffold attachment fa ( 917) 2879 229.5 6e-59
NP_001188268 (OMIM: 602895) scaffold attachment fa ( 916) 2861 228.2 1.5e-58
NP_002958 (OMIM: 602895) scaffold attachment facto ( 915) 2855 227.7 2.1e-58
NP_001307501 (OMIM: 602895) scaffold attachment fa ( 914) 2843 226.8 3.8e-58
XP_016882603 (OMIM: 602895) PREDICTED: scaffold at ( 760) 2202 179.2 6.9e-44
NP_001188269 (OMIM: 602895) scaffold attachment fa ( 848) 2200 179.1 8.1e-44
NP_001307500 (OMIM: 602895) scaffold attachment fa ( 759) 2184 177.9 1.7e-43
XP_016882604 (OMIM: 602895) PREDICTED: scaffold at ( 758) 2178 177.4 2.4e-43
XP_016882605 (OMIM: 602895) PREDICTED: scaffold at ( 464) 1241 107.7 1.4e-22
XP_016882606 (OMIM: 602895) PREDICTED: scaffold at ( 463) 1235 107.2 2e-22
XP_016882607 (OMIM: 602895) PREDICTED: scaffold at ( 461) 1216 105.8 5.2e-22
>>NP_055464 (OMIM: 608066) scaffold attachment factor B2 (953 aa)
initn: 6418 init1: 6418 opt: 6418 Z-score: 2596.5 bits: 491.8 E(85289): 6.9e-138
Smith-Waterman score: 6418; 100.0% identity (100.0% similar) in 953 aa overlap (1-953:1-953)
10 20 30 40 50 60
pF1KA0 MAETLPGSGDSGPGTASLGPGVAETGTRRLSELRVIDLRAELKKRNLDTGGNKSVLMERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MAETLPGSGDSGPGTASLGPGVAETGTRRLSELRVIDLRAELKKRNLDTGGNKSVLMERL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNGLEDDSRDGQEDMEASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNGLEDDSRDGQEDMEASL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 ENLQNMGMMDMSVLDETEVANSSAPDFGEDGTDGLLDSFCDSKEYVAAQLRQLPAQPPEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ENLQNMGMMDMSVLDETEVANSSAPDFGEDGTDGLLDSFCDSKEYVAAQLRQLPAQPPEH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 AVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGETCKSEPVKEESSELEQPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGETCKSEPVKEESSELEQPF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAEQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAEQP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDFDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDFDA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 CNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 CNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTTRA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 TDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 EKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 KKEEKDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KKEEKDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 RKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 ARLQRERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ARLQRERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 YEQERRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 YEQERRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 IDRREGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 IDRREGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 PRGGRDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PRGGRDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGV
850 860 870 880 890 900
910 920 930 940 950
pF1KA0 AGRGGFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AGRGGFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
910 920 930 940 950
>>XP_011526751 (OMIM: 608066) PREDICTED: scaffold attach (902 aa)
initn: 6025 init1: 6025 opt: 6025 Z-score: 2439.3 bits: 462.6 E(85289): 3.9e-129
Smith-Waterman score: 6025; 100.0% identity (100.0% similar) in 902 aa overlap (1-902:1-902)
10 20 30 40 50 60
pF1KA0 MAETLPGSGDSGPGTASLGPGVAETGTRRLSELRVIDLRAELKKRNLDTGGNKSVLMERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAETLPGSGDSGPGTASLGPGVAETGTRRLSELRVIDLRAELKKRNLDTGGNKSVLMERL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNGLEDDSRDGQEDMEASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNGLEDDSRDGQEDMEASL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 ENLQNMGMMDMSVLDETEVANSSAPDFGEDGTDGLLDSFCDSKEYVAAQLRQLPAQPPEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENLQNMGMMDMSVLDETEVANSSAPDFGEDGTDGLLDSFCDSKEYVAAQLRQLPAQPPEH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 AVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGETCKSEPVKEESSELEQPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGETCKSEPVKEESSELEQPF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAEQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAEQP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDFDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDFDA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 CNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTTRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTTRA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 TDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 EKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 KKEEKDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKEEKDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 RKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 ARLQRERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARLQRERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 YEQERRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YEQERRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHA
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 IDRREGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IDRREGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 PRGGRDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRGGRDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGV
850 860 870 880 890 900
910 920 930 940 950
pF1KA0 AGRGGFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
::
XP_011 AG
>>XP_016883009 (OMIM: 608066) PREDICTED: scaffold attach (499 aa)
initn: 3477 init1: 3477 opt: 3477 Z-score: 1421.3 bits: 273.4 E(85289): 2e-72
Smith-Waterman score: 3477; 100.0% identity (100.0% similar) in 499 aa overlap (455-953:1-499)
430 440 450 460 470 480
pF1KA0 NLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEKAK
::::::::::::::::::::::::::::::
XP_016 MSTSDEATKCISHLHRTELHGRMISVEKAK
10 20 30
490 500 510 520 530 540
pF1KA0 NEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEE
40 50 60 70 80 90
550 560 570 580 590 600
pF1KA0 KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQDRKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQDRKSE
100 110 120 130 140 150
610 620 630 640 650 660
pF1KA0 SKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEKARLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEKARLQ
160 170 180 190 200 210
670 680 690 700 710 720
pF1KA0 RERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQE
220 230 240 250 260 270
730 740 750 760 770 780
pF1KA0 RRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHAIDRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHAIDRR
280 290 300 310 320 330
790 800 810 820 830 840
pF1KA0 EGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGG
340 350 360 370 380 390
850 860 870 880 890 900
pF1KA0 RDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRG
400 410 420 430 440 450
910 920 930 940 950
pF1KA0 GFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
460 470 480 490
>>XP_011526752 (OMIM: 608066) PREDICTED: scaffold attach (499 aa)
initn: 3477 init1: 3477 opt: 3477 Z-score: 1421.3 bits: 273.4 E(85289): 2e-72
Smith-Waterman score: 3477; 100.0% identity (100.0% similar) in 499 aa overlap (455-953:1-499)
430 440 450 460 470 480
pF1KA0 NLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEKAK
::::::::::::::::::::::::::::::
XP_011 MSTSDEATKCISHLHRTELHGRMISVEKAK
10 20 30
490 500 510 520 530 540
pF1KA0 NEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEE
40 50 60 70 80 90
550 560 570 580 590 600
pF1KA0 KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQDRKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQDRKSE
100 110 120 130 140 150
610 620 630 640 650 660
pF1KA0 SKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEKARLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEKARLQ
160 170 180 190 200 210
670 680 690 700 710 720
pF1KA0 RERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQE
220 230 240 250 260 270
730 740 750 760 770 780
pF1KA0 RRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHAIDRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHAIDRR
280 290 300 310 320 330
790 800 810 820 830 840
pF1KA0 EGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGG
340 350 360 370 380 390
850 860 870 880 890 900
pF1KA0 RDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRG
400 410 420 430 440 450
910 920 930 940 950
pF1KA0 GFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
460 470 480 490
>>XP_016883011 (OMIM: 608066) PREDICTED: scaffold attach (499 aa)
initn: 3477 init1: 3477 opt: 3477 Z-score: 1421.3 bits: 273.4 E(85289): 2e-72
Smith-Waterman score: 3477; 100.0% identity (100.0% similar) in 499 aa overlap (455-953:1-499)
430 440 450 460 470 480
pF1KA0 NLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEKAK
::::::::::::::::::::::::::::::
XP_016 MSTSDEATKCISHLHRTELHGRMISVEKAK
10 20 30
490 500 510 520 530 540
pF1KA0 NEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEE
40 50 60 70 80 90
550 560 570 580 590 600
pF1KA0 KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQDRKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQDRKSE
100 110 120 130 140 150
610 620 630 640 650 660
pF1KA0 SKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEKARLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEKARLQ
160 170 180 190 200 210
670 680 690 700 710 720
pF1KA0 RERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQE
220 230 240 250 260 270
730 740 750 760 770 780
pF1KA0 RRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHAIDRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHAIDRR
280 290 300 310 320 330
790 800 810 820 830 840
pF1KA0 EGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGG
340 350 360 370 380 390
850 860 870 880 890 900
pF1KA0 RDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRG
400 410 420 430 440 450
910 920 930 940 950
pF1KA0 GFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
460 470 480 490
>>XP_016883010 (OMIM: 608066) PREDICTED: scaffold attach (499 aa)
initn: 3477 init1: 3477 opt: 3477 Z-score: 1421.3 bits: 273.4 E(85289): 2e-72
Smith-Waterman score: 3477; 100.0% identity (100.0% similar) in 499 aa overlap (455-953:1-499)
430 440 450 460 470 480
pF1KA0 NLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEKAK
::::::::::::::::::::::::::::::
XP_016 MSTSDEATKCISHLHRTELHGRMISVEKAK
10 20 30
490 500 510 520 530 540
pF1KA0 NEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEEKKPEDIKKEE
40 50 60 70 80 90
550 560 570 580 590 600
pF1KA0 KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQDRKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSSKSQDRKSE
100 110 120 130 140 150
610 620 630 640 650 660
pF1KA0 SKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEKARLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHERKEKARLQ
160 170 180 190 200 210
670 680 690 700 710 720
pF1KA0 RERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQE
220 230 240 250 260 270
730 740 750 760 770 780
pF1KA0 RRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHAIDRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRPGRRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQYQDHAIDRR
280 290 300 310 320 330
790 800 810 820 830 840
pF1KA0 EGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGG
340 350 360 370 380 390
850 860 870 880 890 900
pF1KA0 RDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRG
400 410 420 430 440 450
910 920 930 940 950
pF1KA0 GFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
460 470 480 490
>>NP_001188267 (OMIM: 602895) scaffold attachment factor (917 aa)
initn: 3073 init1: 1582 opt: 2879 Z-score: 1179.3 bits: 229.5 E(85289): 6e-59
Smith-Waterman score: 4315; 70.5% identity (85.6% similar) in 958 aa overlap (1-953:1-917)
10 20 30 40 50
pF1KA0 MAETLPGSGDSGP-GTASLGPGVAETGTRRLSELRVIDLRAELKKRNLDTGGNKSVLMER
::::: : :::: :.:.:. . .::::::::.::::::::::.:::.:..:::::::::
NP_001 MAETLSGLGDSGAAGAAALSSASSETGTRRLSDLRVIDLRAELRKRNVDSSGNKSVLMER
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 LKKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNGLEDDSRDGQEDMEAS
::::...:: .:::: : :. .::..:: :: : ::::.::::::..: :::::.:.:
NP_001 LKKAIEDEGGNPDEIEITSEG-NKKTSKRSSKGRKPEEEGVEDNGLEENSGDGQEDVETS
70 80 90 100 110
120 130 140 150 160 170
pF1KA0 LENLQNMGMMDMSVLDETEVANSSAPDFGEDG-TDGLLDSFCDSKEYVAAQLRQLPAQPP
:::::.. .::.:::::.:. :.:. : :: .:.: .:. ::.: : .....:: :
NP_001 LENLQDIDIMDISVLDEAEIDNGSVADCVEDDDADNLQESLSDSRELVEGEMKELPEQLQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA0 EHAVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGETCKSEPVKEESSELEQ
:::.. . :.:.::: .: . .::: ::::::::::::::::::::::::::::::
NP_001 EHAIEDKETINNLDTSSSDFTILQEIEEPSLEPENEKILDILGETCKSEPVKEESSELEQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 PFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KA0 QPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDF
300 310 320 330 340 350
360 370 380 390 400 410
pF1KA0 DACNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTT
::::::::::::::::::::::::: ....: : . :.:::: :. :::.:::::::::
NP_001 DACNEVPPAPKESSTSEGADQKMSSPEDDSDTKRLSKEEKGR--SSCGRNFWVSGLSSTT
360 370 380 390 400 410
420 430 440 450 460 470
pF1KA0 RATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMI
:::::::::::::::::::::::::::::::::::::::..::::::.:::.:::::.::
NP_001 RATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMI
420 430 440 450 460 470
480 490 500 510 520 530
pF1KA0 SVEKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEE-KKP
:::::::::.::: ::... . :::: :. :: .: .:...: ..:.. ::
NP_001 SVEKAKNEPVGKKTSDKRDSDGKKEKSSNSDR---------STNLKRDDKCDRKDDAKKG
480 490 500 510 520
540 550 560 570 580 590
pF1KA0 EDIKKEE-KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSS
.: . :. ::::. ::::..:::.::::::: ::::::::::: :::::::.. ::::.:
NP_001 DDGSGEKSKDQDDQKPGPSERSRATKSGSRGTERTVVMDKSKGVPVISVKTSG-SKERAS
530 540 550 560 570 580
600 610 620 630 640 650
pF1KA0 KSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHE
::::::: :.:::...::::.:: : ..:. : . : ::. :::::..: :
NP_001 KSQDRKSASREKRSVVSFDKVKEPR-----KSRDSE----SHSRVRERSEREQRMQAQWE
590 600 610 620 630
660 670 680 690 700 710
pF1KA0 RKEKARLQRERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQ
:.:. ::. : .: ::::::::::::::::::::.::.:::.::::::::::::::::
NP_001 REERERLEIARERLAFQRQRLERERMERERLERERMHVEHERRREQERIHREREELRRQQ
640 650 660 670 680 690
720 730 740 750 760 770
pF1KA0 EQLRYEQERRPG-RRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQ
: :::::::::. ::::::::::::::::.::.:...::..:: : : :::::::::::.
NP_001 E-LRYEQERRPAVRRPYDLDRRDDAYWPEAKRAALDERYHSDFNRQD-RFHDFDHRDRGR
700 710 720 730 740 750
780 790 800 810 820 830
pF1KA0 YQDHAIDRREGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGR
: ::..::::::: :::. :.:::: . :::: :::::::::::::::::::.::::
NP_001 YPDHSVDRREGSRSMMGE-REGQHYPER---HGGP-ERHGRDSRDGWGGYGSDKRMSEGR
760 770 780 790 800 810
840 850 860 870 880 890
pF1KA0 GLPPPPRGGRDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMA
:::::::: ::::.:..: .. :.:::. :.: .:.: :::::::..:: ::::::
NP_001 GLPPPPRGRRDWGDHGRREDD---RSWQGTADGGMMDRDHKRWQGGERSMSGHSGPGHMM
820 830 840 850 860
900 910 920 930 940 950
pF1KA0 SRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
.:::..:::.:: :: :.:: .: ::..:: ..:.:::: : .:::::
NP_001 NRGGMSGRGSFAPGGASRGHPIPHGGMQGG-FGGQSRGSR--------PSDARFTRRY
870 880 890 900 910
>>NP_001188268 (OMIM: 602895) scaffold attachment factor (916 aa)
initn: 3047 init1: 1582 opt: 2861 Z-score: 1172.0 bits: 228.2 E(85289): 1.5e-58
Smith-Waterman score: 4324; 70.5% identity (85.6% similar) in 958 aa overlap (1-953:1-916)
10 20 30 40 50
pF1KA0 MAETLPGSGDSGP-GTASLGPGVAETGTRRLSELRVIDLRAELKKRNLDTGGNKSVLMER
::::: : :::: :.:.:. . .::::::::.::::::::::.:::.:..:::::::::
NP_001 MAETLSGLGDSGAAGAAALSSASSETGTRRLSDLRVIDLRAELRKRNVDSSGNKSVLMER
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 LKKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNGLEDDSRDGQEDMEAS
::::...:: .:::: : :. .::..:: :: : ::::.::::::..: :::::.:.:
NP_001 LKKAIEDEGGNPDEIEITSEG-NKKTSKRSSKGRKPEEEGVEDNGLEENSGDGQEDVETS
70 80 90 100 110
120 130 140 150 160 170
pF1KA0 LENLQNMGMMDMSVLDETEVANSSAPDFGEDG-TDGLLDSFCDSKEYVAAQLRQLPAQPP
:::::.. .::.:::::.:. :.:. : :: .:.: .:. ::.: : .....:: :
NP_001 LENLQDIDIMDISVLDEAEIDNGSVADCVEDDDADNLQESLSDSRELVEGEMKELPEQLQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA0 EHAVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGETCKSEPVKEESSELEQ
:::.. . :.:.::: .: . .::: ::::::::::::::::::::::::::::::
NP_001 EHAIEDKETINNLDTSSSDFTILQEIEEPSLEPENEKILDILGETCKSEPVKEESSELEQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 PFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KA0 QPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDF
300 310 320 330 340 350
360 370 380 390 400 410
pF1KA0 DACNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTT
::::::::::::::::::::::::: ....: : . :.:::: :. :::.:::::::::
NP_001 DACNEVPPAPKESSTSEGADQKMSSPEDDSDTKRLSKEEKGR--SSCGRNFWVSGLSSTT
360 370 380 390 400 410
420 430 440 450 460 470
pF1KA0 RATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMI
:::::::::::::::::::::::::::::::::::::::..::::::.:::.:::::.::
NP_001 RATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMI
420 430 440 450 460 470
480 490 500 510 520 530
pF1KA0 SVEKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEE-KKP
:::::::::.::: ::... . :::: :. :: .: .:...: ..:.. ::
NP_001 SVEKAKNEPVGKKTSDKRDSDGKKEKSSNSDR---------STNLKRDDKCDRKDDAKKG
480 490 500 510 520
540 550 560 570 580 590
pF1KA0 EDIKKEE-KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSS
.: . :. ::::. ::::..:::.::::::: ::::::::::: :::::::.. ::::.:
NP_001 DDGSGEKSKDQDDQKPGPSERSRATKSGSRGTERTVVMDKSKGVPVISVKTSG-SKERAS
530 540 550 560 570 580
600 610 620 630 640 650
pF1KA0 KSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHE
::::::: :.:::...::::.:: :. :..: .: ::. :::::..: :
NP_001 KSQDRKSASREKRSVVSFDKVKEPRKS----------RDSESHRVRERSEREQRMQAQWE
590 600 610 620 630
660 670 680 690 700 710
pF1KA0 RKEKARLQRERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQ
:.:. ::. : .: ::::::::::::::::::::.::.:::.::::::::::::::::
NP_001 REERERLEIARERLAFQRQRLERERMERERLERERMHVEHERRREQERIHREREELRRQQ
640 650 660 670 680 690
720 730 740 750 760 770
pF1KA0 EQLRYEQERRPG-RRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQ
: :::::::::. ::::::::::::::::.::.:...::..:: : : :::::::::::.
NP_001 E-LRYEQERRPAVRRPYDLDRRDDAYWPEAKRAALDERYHSDFNRQD-RFHDFDHRDRGR
700 710 720 730 740 750
780 790 800 810 820 830
pF1KA0 YQDHAIDRREGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGR
: ::..::::::: :::. :.:::: . :::: :::::::::::::::::::.::::
NP_001 YPDHSVDRREGSRSMMGE-REGQHYPER---HGGP-ERHGRDSRDGWGGYGSDKRMSEGR
760 770 780 790 800 810
840 850 860 870 880 890
pF1KA0 GLPPPPRGGRDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMA
:::::::: ::::.:..: .. :.:::. :.: .:.: :::::::..:: ::::::
NP_001 GLPPPPRGRRDWGDHGRREDD---RSWQGTADGGMMDRDHKRWQGGERSMSGHSGPGHMM
820 830 840 850 860
900 910 920 930 940 950
pF1KA0 SRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
.:::..:::.:: :: :.:: .: ::..:: ..:.:::: : .:::::
NP_001 NRGGMSGRGSFAPGGASRGHPIPHGGMQGG-FGGQSRGSR--------PSDARFTRRY
870 880 890 900 910
>>NP_002958 (OMIM: 602895) scaffold attachment factor B1 (915 aa)
initn: 2683 init1: 1582 opt: 2855 Z-score: 1169.6 bits: 227.7 E(85289): 2.1e-58
Smith-Waterman score: 4296; 70.4% identity (85.5% similar) in 958 aa overlap (1-953:1-915)
10 20 30 40 50
pF1KA0 MAETLPGSGDSGP-GTASLGPGVAETGTRRLSELRVIDLRAELKKRNLDTGGNKSVLMER
::::: : :::: :.:.:. . .::::::::.::::::::::.:::.:..:::::::::
NP_002 MAETLSGLGDSGAAGAAALSSASSETGTRRLSDLRVIDLRAELRKRNVDSSGNKSVLMER
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 LKKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNGLEDDSRDGQEDMEAS
::::...:: .:::: : :. .::..:: :: : ::::.::::::..: :::::.:.:
NP_002 LKKAIEDEGGNPDEIEITSEG-NKKTSKRSSKGRKPEEEGVEDNGLEENSGDGQEDVETS
70 80 90 100 110
120 130 140 150 160 170
pF1KA0 LENLQNMGMMDMSVLDETEVANSSAPDFGEDG-TDGLLDSFCDSKEYVAAQLRQLPAQPP
:::::.. .::.:::::.:. :.:. : :: .:.: .:. ::.: : .....:: :
NP_002 LENLQDIDIMDISVLDEAEIDNGSVADCVEDDDADNLQESLSDSRELVEGEMKELPEQLQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA0 EHAVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGETCKSEPVKEESSELEQ
:::.. . :.:.::: .: . .::: ::::::::::::::::::::::::::::::
NP_002 EHAIEDKETINNLDTSSSDFTILQEIEEPSLEPENEKILDILGETCKSEPVKEESSELEQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 PFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KA0 QPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDF
300 310 320 330 340 350
360 370 380 390 400 410
pF1KA0 DACNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTT
::::::::::::::::::::::::: ....: : . :.:::: :. :::.:::::::::
NP_002 DACNEVPPAPKESSTSEGADQKMSSPEDDSDTKRLSKEEKGR--SSCGRNFWVSGLSSTT
360 370 380 390 400 410
420 430 440 450 460 470
pF1KA0 RATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMI
:::::::::::::::::::::::::::::::::::::::..::::::.:::.:::::.::
NP_002 RATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMI
420 430 440 450 460 470
480 490 500 510 520 530
pF1KA0 SVEKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEE-KKP
:::::::::.::: ::... . :::: :. :: .: .:...: ..:.. ::
NP_002 SVEKAKNEPVGKKTSDKRDSDGKKEKSSNSDR---------STNLKRDDKCDRKDDAKKG
480 490 500 510 520
540 550 560 570 580 590
pF1KA0 EDIKKEE-KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSS
.: . :. ::::. ::::..:::.::::::: ::::::::::: :::::::.. ::::.:
NP_002 DDGSGEKSKDQDDQKPGPSERSRATKSGSRGTERTVVMDKSKGVPVISVKTSG-SKERAS
530 540 550 560 570 580
600 610 620 630 640 650
pF1KA0 KSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHE
::::::: :.:::...::::.:: : ..:. : . : ::. :::::..: :
NP_002 KSQDRKSASREKRSVVSFDKVKEPR-----KSRDSE----SHSRVRERSEREQRMQAQWE
590 600 610 620 630
660 670 680 690 700 710
pF1KA0 RKEKARLQRERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQ
:.:. ::. : .: ::::::::::::::::::::.::.:::.::::::::::::::::
NP_002 REERERLEIARERLAFQRQRLERERMERERLERERMHVEHERRREQERIHREREELRRQQ
640 650 660 670 680 690
720 730 740 750 760 770
pF1KA0 EQLRYEQERRPG-RRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQ
: :::::::::. ::::::::::::::::.::.:...::..:: : : :::::::::::.
NP_002 E-LRYEQERRPAVRRPYDLDRRDDAYWPEAKRAALDERYHSDFNRQD-RFHDFDHRDRGR
700 710 720 730 740 750
780 790 800 810 820 830
pF1KA0 YQDHAIDRREGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGR
: ::..::::::: :::. :.:::: . :::: :::::::::::::::::::.::::
NP_002 YPDHSVDRREGSRSMMGE-REGQHYPER---HGGP-ERHGRDSRDGWGGYGSDKRMSEGR
760 770 780 790 800 810
840 850 860 870 880 890
pF1KA0 GLPPPPRGGRDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMA
::::::: ::::.:..: .. :.:::. :.: .:.: :::::::..:: ::::::
NP_002 GLPPPPR--RDWGDHGRREDD---RSWQGTADGGMMDRDHKRWQGGERSMSGHSGPGHMM
820 830 840 850 860
900 910 920 930 940 950
pF1KA0 SRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
.:::..:::.:: :: :.:: .: ::..:: ..:.:::: : .:::::
NP_002 NRGGMSGRGSFAPGGASRGHPIPHGGMQGG-FGGQSRGSR--------PSDARFTRRY
870 880 890 900 910
>>NP_001307501 (OMIM: 602895) scaffold attachment factor (914 aa)
initn: 2705 init1: 1582 opt: 2843 Z-score: 1164.8 bits: 226.8 E(85289): 3.8e-58
Smith-Waterman score: 4305; 70.4% identity (85.5% similar) in 958 aa overlap (1-953:1-914)
10 20 30 40 50
pF1KA0 MAETLPGSGDSGP-GTASLGPGVAETGTRRLSELRVIDLRAELKKRNLDTGGNKSVLMER
::::: : :::: :.:.:. . .::::::::.::::::::::.:::.:..:::::::::
NP_001 MAETLSGLGDSGAAGAAALSSASSETGTRRLSDLRVIDLRAELRKRNVDSSGNKSVLMER
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 LKKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNGLEDDSRDGQEDMEAS
::::...:: .:::: : :. .::..:: :: : ::::.::::::..: :::::.:.:
NP_001 LKKAIEDEGGNPDEIEITSEG-NKKTSKRSSKGRKPEEEGVEDNGLEENSGDGQEDVETS
70 80 90 100 110
120 130 140 150 160 170
pF1KA0 LENLQNMGMMDMSVLDETEVANSSAPDFGEDG-TDGLLDSFCDSKEYVAAQLRQLPAQPP
:::::.. .::.:::::.:. :.:. : :: .:.: .:. ::.: : .....:: :
NP_001 LENLQDIDIMDISVLDEAEIDNGSVADCVEDDDADNLQESLSDSRELVEGEMKELPEQLQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA0 EHAVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGETCKSEPVKEESSELEQ
:::.. . :.:.::: .: . .::: ::::::::::::::::::::::::::::::
NP_001 EHAIEDKETINNLDTSSSDFTILQEIEEPSLEPENEKILDILGETCKSEPVKEESSELEQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 PFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQSSKADSLLAVVKREPAE
240 250 260 270 280 290
300 310 320 330 340 350
pF1KA0 QPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTEAPSPEARDSKEDGRKFDF
300 310 320 330 340 350
360 370 380 390 400 410
pF1KA0 DACNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTT
::::::::::::::::::::::::: ....: : . :.:::: :. :::.:::::::::
NP_001 DACNEVPPAPKESSTSEGADQKMSSPEDDSDTKRLSKEEKGR--SSCGRNFWVSGLSSTT
360 370 380 390 400 410
420 430 440 450 460 470
pF1KA0 RATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMI
:::::::::::::::::::::::::::::::::::::::..::::::.:::.:::::.::
NP_001 RATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMI
420 430 440 450 460 470
480 490 500 510 520 530
pF1KA0 SVEKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIKIEKTVIKKEEKIEKKEE-KKP
:::::::::.::: ::... . :::: :. :: .: .:...: ..:.. ::
NP_001 SVEKAKNEPVGKKTSDKRDSDGKKEKSSNSDR---------STNLKRDDKCDRKDDAKKG
480 490 500 510 520
540 550 560 570 580 590
pF1KA0 EDIKKEE-KDQDELKPGPTNRSRVTKSGSRGMERTVVMDKSKGEPVISVKTTSRSKERSS
.: . :. ::::. ::::..:::.::::::: ::::::::::: :::::::.. ::::.:
NP_001 DDGSGEKSKDQDDQKPGPSERSRATKSGSRGTERTVVMDKSKGVPVISVKTSG-SKERAS
530 540 550 560 570 580
600 610 620 630 640 650
pF1KA0 KSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRETERRREREQREREQRLEAFHE
::::::: :.:::...::::.:: :. :..: .: ::. :::::..: :
NP_001 KSQDRKSASREKRSVVSFDKVKEPRKS----------RDSESHRVRERSEREQRMQAQWE
590 600 610 620 630
660 670 680 690 700 710
pF1KA0 RKEKARLQRERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQ
:.:. ::. : .: ::::::::::::::::::::.::.:::.::::::::::::::::
NP_001 REERERLEIARERLAFQRQRLERERMERERLERERMHVEHERRREQERIHREREELRRQQ
640 650 660 670 680 690
720 730 740 750 760 770
pF1KA0 EQLRYEQERRPG-RRPYDLDRRDDAYWPEGKRVAMEDRYRADFPRPDHRFHDFDHRDRGQ
: :::::::::. ::::::::::::::::.::.:...::..:: : : :::::::::::.
NP_001 E-LRYEQERRPAVRRPYDLDRRDDAYWPEAKRAALDERYHSDFNRQD-RFHDFDHRDRGR
700 710 720 730 740 750
780 790 800 810 820 830
pF1KA0 YQDHAIDRREGSRPMMGDHRDGQHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGR
: ::..::::::: :::. :.:::: . :::: :::::::::::::::::::.::::
NP_001 YPDHSVDRREGSRSMMGE-REGQHYPER---HGGP-ERHGRDSRDGWGGYGSDKRMSEGR
760 770 780 790 800 810
840 850 860 870 880 890
pF1KA0 GLPPPPRGGRDWGEHNQRLEEHQARAWQGAMDAGAASREHARWQGGERGLSGPSGPGHMA
::::::: ::::.:..: .. :.:::. :.: .:.: :::::::..:: ::::::
NP_001 GLPPPPR--RDWGDHGRREDD---RSWQGTADGGMMDRDHKRWQGGERSMSGHSGPGHMM
820 830 840 850 860
900 910 920 930 940 950
pF1KA0 SRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQDRGSRVPHPHPHPPPYPHFTRRY
.:::..:::.:: :: :.:: .: ::..:: ..:.:::: : .:::::
NP_001 NRGGMSGRGSFAPGGASRGHPIPHGGMQGG-FGGQSRGSR--------PSDARFTRRY
870 880 890 900 910
953 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 00:30:17 2016 done: Fri Nov 4 00:30:19 2016
Total Scan time: 14.910 Total Display time: 0.290
Function used was FASTA [36.3.4 Apr, 2011]