Result of FASTA (ccds) for
pF1KA0350
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0350, 1053 aa
1>>>pF1KA0350 1053 - 1053 aa - 1053 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0745+/-0.00118; mu= -0.1321+/- 0.071
mean_var=205.3309+/-41.663, 0's: 0 Z-trim(109.5): 8 B-trim: 0 in 0/52
Lambda= 0.089505
statistics sampled from 10932 (10935) to 10932 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.336), width: 16
Scan time: 4.370
The best scores are: opt bits E(32554)
CCDS45409.1 CLEC16A gene_id:23274|Hs108|chr16 (1053) 6906 905.2 0
CCDS58423.1 CLEC16A gene_id:23274|Hs108|chr16 ( 906) 2958 395.4 2.9e-109
>>CCDS45409.1 CLEC16A gene_id:23274|Hs108|chr16 (1053 aa)
initn: 6906 init1: 6906 opt: 6906 Z-score: 4829.1 bits: 905.2 E(32554): 0
Smith-Waterman score: 6906; 100.0% identity (100.0% similar) in 1053 aa overlap (1-1053:1-1053)
10 20 30 40 50 60
pF1KA0 MFGRSRSWVGGGHGKTSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MFGRSRSWVGGGHGKTSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 HPESMVRIAVRTITLNVYKVSLDNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDDCVQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HPESMVRIAVRTITLNVYKVSLDNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDDCVQT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DEEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLENQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DEEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLENQD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 KGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSEMYAKTEQDIQRSSAKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSEMYAKTEQDIQRSSAKP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SIRCFIKPTETLERSLEMNKHKGKRRVQKRPNYKNVGEEEDEEKGPTEDAQEDAEKAKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SIRCFIKPTETLERSLEMNKHKGKRRVQKRPNYKNVGEEEDEEKGPTEDAQEDAEKAKGT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 EGGSKGIKTSGESEEIEMVIMERSKLSELAASTSVQEQNTTDEEKSAAATCSESTQWSRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EGGSKGIKTSGESEEIEMVIMERSKLSELAASTSVQEQNTTDEEKSAAATCSESTQWSRP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 FLDMVYHALDSPDDDYHALFVLCLLYAMSHNKGMDPEKLERIQLPVPNAAEKTTYNHPLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FLDMVYHALDSPDDDYHALFVLCLLYAMSHNKGMDPEKLERIQLPVPNAAEKTTYNHPLA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 ERLIRIMNNAAQPDGKIRLATLELSCLLLKQQVLMSAGCIMKDVHLACLEGAREESVHLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ERLIRIMNNAAQPDGKIRLATLELSCLLLKQQVLMSAGCIMKDVHLACLEGAREESVHLV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 RHFYKGEDIFLDMFEDEYRSMTMKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RHFYKGEDIFLDMFEDEYRSMTMKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 EKTRRAIRVFFMLRSLSLQLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EKTRRAIRVFFMLRSLSLQLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 GMVQRFLAVDIYQMSLVEPDVSRLGWGVVKFAGLLQDMQVTGVEDDSRALNITIHKPASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GMVQRFLAVDIYQMSLVEPDVSRLGWGVVKFAGLLQDMQVTGVEDDSRALNITIHKPASS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 PHSKPFPILQATFIFSDHIRCIIAKQRLAKGRIQARRMKMQRIAALLDLPIQPTTEVLGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PHSKPFPILQATFIFSDHIRCIIAKQRLAKGRIQARRMKMQRIAALLDLPIQPTTEVLGF
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 GLGSSTSTQHLPFRFYDQGRRGSSDPTVQRSVFASVDKVPGFAVAQCINQHSSPSLSSQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GLGSSTSTQHLPFRFYDQGRRGSSDPTVQRSVFASVDKVPGFAVAQCINQHSSPSLSSQS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 PPSASGSPSGSGSTSHCDSGGTSSSSTPSTAQSPADAPMSPELPKPHLPDQLVIVNETEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PPSASGSPSGSGSTSHCDSGGTSSSSTPSTAQSPADAPMSPELPKPHLPDQLVIVNETEA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 DSKPSKNVARSAAVETASLSPSLVPARQPTISLLCEDTADTLSVESLTLVPPVDPHSLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DSKPSKNVARSAAVETASLSPSLVPARQPTISLLCEDTADTLSVESLTLVPPVDPHSLRS
970 980 990 1000 1010 1020
1030 1040 1050
pF1KA0 LTGMPPLSTPAAACTEPVGEEAACAEPVGTAED
:::::::::::::::::::::::::::::::::
CCDS45 LTGMPPLSTPAAACTEPVGEEAACAEPVGTAED
1030 1040 1050
>>CCDS58423.1 CLEC16A gene_id:23274|Hs108|chr16 (906 aa)
initn: 4228 init1: 2943 opt: 2958 Z-score: 2075.0 bits: 395.4 E(32554): 2.9e-109
Smith-Waterman score: 5612; 98.0% identity (98.0% similar) in 881 aa overlap (1-881:1-863)
10 20 30 40 50 60
pF1KA0 MFGRSRSWVGGGHGKTSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MFGRSRSWVGGGHGKTSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 HPESMVRIAVRTITLNVYKVSLDNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDDCVQT
:::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS58 HPESMVRIAVRTITLNVYKV--DNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDDCVQT
190 200 210 220 230
250 260 270 280 290 300
pF1KA0 DEEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLENQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DEEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLENQD
240 250 260 270 280 290
310 320 330 340 350 360
pF1KA0 KGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSEMYAKTEQDIQRSSAKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSEMYAKTEQDIQRSSAKP
300 310 320 330 340 350
370 380 390 400 410 420
pF1KA0 SIRCFIKPTETLERSLEMNKHKGKRRVQKRPNYKNVGEEEDEEKGPTEDAQEDAEKAKGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SIRCFIKPTETLERSLEMNKHKGKRRVQKRPNYKNVGEEEDEEKGPTEDAQEDAEKAK--
360 370 380 390 400 410
430 440 450 460 470 480
pF1KA0 EGGSKGIKTSGESEEIEMVIMERSKLSELAASTSVQEQNTTDEEKSAAATCSESTQWSRP
::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 --------------EIEMVIMERSKLSELAASTSVQEQNTTDEEKSAAATCSESTQWSRP
420 430 440 450 460
490 500 510 520 530 540
pF1KA0 FLDMVYHALDSPDDDYHALFVLCLLYAMSHNKGMDPEKLERIQLPVPNAAEKTTYNHPLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FLDMVYHALDSPDDDYHALFVLCLLYAMSHNKGMDPEKLERIQLPVPNAAEKTTYNHPLA
470 480 490 500 510 520
550 560 570 580 590 600
pF1KA0 ERLIRIMNNAAQPDGKIRLATLELSCLLLKQQVLMSAGCIMKDVHLACLEGAREESVHLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ERLIRIMNNAAQPDGKIRLATLELSCLLLKQQVLMSAGCIMKDVHLACLEGAREESVHLV
530 540 550 560 570 580
610 620 630 640 650 660
pF1KA0 RHFYKGEDIFLDMFEDEYRSMTMKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RHFYKGEDIFLDMFEDEYRSMTMKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDV
590 600 610 620 630 640
670 680 690 700 710 720
pF1KA0 EKTRRAIRVFFMLRSLSLQLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EKTRRAIRVFFMLRSLSLQLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDG
650 660 670 680 690 700
730 740 750 760 770 780
pF1KA0 GMVQRFLAVDIYQMSLVEPDVSRLGWGVVKFAGLLQDMQVTGVEDDSRALNITIHKPASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GMVQRFLAVDIYQMSLVEPDVSRLGWGVVKFAGLLQDMQVTGVEDDSRALNITIHKPASS
710 720 730 740 750 760
790 800 810 820 830 840
pF1KA0 PHSKPFPILQATFIFSDHIRCIIAKQRLAKGRIQARRMKMQRIAALLDLPIQPTTEVLGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PHSKPFPILQATFIFSDHIRCIIAKQRLAKGRIQARRMKMQRIAALLDLPIQPTTEVLGF
770 780 790 800 810 820
850 860 870 880 890 900
pF1KA0 GLGSSTSTQHLPFRFYDQGRRGSSDPTVQRSVFASVDKVPGFAVAQCINQHSSPSLSSQS
:::::::::::::::::::::::::::::::::::::::::
CCDS58 GLGSSTSTQHLPFRFYDQGRRGSSDPTVQRSVFASVDKVPGEPAPRPAPQLVHHGGRSRS
830 840 850 860 870 880
910 920 930 940 950 960
pF1KA0 PPSASGSPSGSGSTSHCDSGGTSSSSTPSTAQSPADAPMSPELPKPHLPDQLVIVNETEA
CCDS58 FSLWSLCELPFLSQKPRRLAAPAS
890 900
1053 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 09:23:57 2016 done: Thu Nov 3 09:23:58 2016
Total Scan time: 4.370 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]