FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0354, 677 aa
  1>>>pF1KA0354 677 - 677 aa - 677 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 13.1273+/-0.00147; mu= -17.4132+/- 0.084
 mean_var=696.7619+/-192.086, 0's: 0 Z-trim(110.8): 108  B-trim: 613 in 1/51
 Lambda= 0.048588
 statistics sampled from 11833 (11891) to 11833 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.702), E-opt: 0.2 (0.365), width:  16
 Scan time:  3.480

The best scores are:                                      opt bits E(32554)
CCDS6610.1 ZBTB5 gene_id:9925|Hs108|chr9           ( 677) 4499 331.7 2.1e-90


>>CCDS6610.1 ZBTB5 gene_id:9925|Hs108|chr9                (677 aa)
 initn: 4499 init1: 4499 opt: 4499  Z-score: 1736.4  bits: 331.7 E(32554): 2.1e-90
Smith-Waterman score: 4499; 100.0% identity (100.0% similar) in 677 aa overlap (1-677:1-677)

               10        20        30        40        50        60
pF1KA0 MDFPGHFEQIFQQLNYQRLHGQLCDCVIVVGNRHFKAHRSVLAACSTHFRALFSVAEGDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MDFPGHFEQIFQQLNYQRLHGQLCDCVIVVGNRHFKAHRSVLAACSTHFRALFSVAEGDQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 TMNMIQLDSEVVTAEAFAALIDMMYTSTLMLGESNVMDVLLAASHLHLNSVVKACKHYLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TMNMIQLDSEVVTAEAFAALIDMMYTSTLMLGESNVMDVLLAASHLHLNSVVKACKHYLT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 TRTLPMSPPSERVQEQSARMQRSFMLQQLGLSIVSSALNSSQNGEEQPAPMSSSMRSNLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 TRTLPMSPPSERVQEQSARMQRSFMLQQLGLSIVSSALNSSQNGEEQPAPMSSSMRSNLD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 QRTPFPMRRLHKRKQSAEERARQRLRPSIDESAISDVTPENGPSGVHSREEFFSPDSLKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 QRTPFPMRRLHKRKQSAEERARQRLRPSIDESAISDVTPENGPSGVHSREEFFSPDSLKI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 VDNPKADGMTDNQEDSAIMFDQSFGTQEDAQVPSQSDNSAGNMAQLSMASRATQVETSFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 VDNPKADGMTDNQEDSAIMFDQSFGTQEDAQVPSQSDNSAGNMAQLSMASRATQVETSFD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 QEAAPEKSSFQCENPEVGLGEKEHMRVVVKSEPLSSPEPQDEVSDVTSQAEGSESVEVEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 QEAAPEKSSFQCENPEVGLGEKEHMRVVVKSEPLSSPEPQDEVSDVTSQAEGSESVEVEG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 VVVSAEKIDLSPESSDRSFSDPQSSTDRVGDIHILEVTNNLEHKSTFSISNFLNKSRGNN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 VVVSAEKIDLSPESSDRSFSDPQSSTDRVGDIHILEVTNNLEHKSTFSISNFLNKSRGNN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 FTANQNNDDNIPNTTSDCRLESEAPYLLSPEAGPAGGPSSAPGSHVENPFSEPADSHFVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 FTANQNNDDNIPNTTSDCRLESEAPYLLSPEAGPAGGPSSAPGSHVENPFSEPADSHFVR
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 PMQEVMGLPCVQTSGYQGGEQFGMDFSRSGLGLHSSFSRVMIGSPRGGASNFPYYRRIAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PMQEVMGLPCVQTSGYQGGEQFGMDFSRSGLGLHSSFSRVMIGSPRGGASNFPYYRRIAP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 KMPVVTSVRSSQIPENSTSSQLMMNGATSSFENGHPSQPGPPQLTRASADVLSKCKKALS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 KMPVVTSVRSSQIPENSTSSQLMMNGATSSFENGHPSQPGPPQLTRASADVLSKCKKALS
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 EHNVLVVEGARKYACKICCKTFLTLTDCKKHIRVHTGEKPYACLKCGKRFSQSSHLYKHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 EHNVLVVEGARKYACKICCKTFLTLTDCKKHIRVHTGEKPYACLKCGKRFSQSSHLYKHS
              610       620       630       640       650       660

              670       
pF1KA0 KTTCLRWQSSNLPSTLL
       :::::::::::::::::
CCDS66 KTTCLRWQSSNLPSTLL
              670       




677 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 18:41:40 2016 done: Wed Nov  2 18:41:41 2016
 Total Scan time:  3.480 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]