(Circular) (Six-base) MAPSORT of: pF1KA0358.seq Check: 9608 from: 1 to: 7856 pF1KA0358 7856 bp With 182 enzymes: SgfI * June 20, 2008 10:19 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 1189 3754 4776 1189 Size: 2565 1022 4269 Fragments arranged by size: 4269 2565 1022 AatII G_ACGT'C Cuts at: 2370 3613 2370 Size: 1243 6613 AccI GT'mk_AC Cuts at: 688 908 4894 688 Size: 220 3986 3650 Fragments arranged by size: 3986 3650 220 Acc65I G'GTAC_C Cuts at: 4160 4872 4160 Size: 712 7144 AclI AA'CG_TT Cuts at: 7696 7696 Size: 7856 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 2673 2816 2962 3548 3713 3953 4780 5681 6113 Size: 143 146 586 165 240 827 901 432 Cuts at: 6113 6466 7128 2673 Size: 353 662 3401 Fragments arranged by size: 3401 901 827 662 586 432 353 240 165 146 143 AfeI AGC'GCT Cuts at: 4537 4537 Size: 7856 AflIII A'CryG_T Cuts at: 1636 2502 5208 7008 7289 1636 Size: 866 2706 1800 281 2203 Fragments arranged by size: 2706 2203 1800 866 281 AhdI GACnn_n'nnGTC Cuts at: 1503 4571 1503 Size: 3068 4788 AleI CACnn'nnGTG Cuts at: 982 3706 982 Size: 2724 5132 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 3200 3200 Size: 7856 AlwNI CAG_nnn'CTG Cuts at: 1206 2940 4758 4833 5161 6599 1206 Size: 1734 1818 75 328 1438 2463 Fragments arranged by size: 2463 1818 1734 1438 328 75 ApaLI G'TGCA_C Cuts at: 2953 6694 2953 Size: 3741 4115 ApoI r'AATT_y Cuts at: 1447 1522 1802 3450 4813 4860 7209 7465 1447 Size: 75 280 1648 1363 47 2349 256 1838 Fragments arranged by size: 2349 1838 1648 1363 280 256 75 47 AseI AT'TA_AT Cuts at: 20 2057 20 Size: 2037 5819 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 7856 AvaI C'yCGr_G Cuts at: 174 280 578 752 1085 2585 2726 2806 3386 Size: 106 298 174 333 1500 141 80 580 Cuts at: 3386 3809 4876 174 Size: 423 1067 3154 Fragments arranged by size: 3154 1500 1067 580 423 333 298 174 141 106 80 AvrII C'CTAG_G Cuts at: 3972 3972 Size: 7856 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 1623 1656 2664 2697 1623 Size: 33 1008 33 6782 Fragments arranged by size: 6782 1008 33 33 BamHI G'GATC_C Cuts at: 1769 3318 3988 4881 1769 Size: 1549 670 893 4744 Fragments arranged by size: 4744 1549 893 670 BanI G'GyrC_C Cuts at: 170 2722 3390 4160 4298 4872 5286 5534 5569 Size: 2552 668 770 138 574 414 248 35 Cuts at: 5569 170 Size: 2457 Fragments arranged by size: 2552 2457 770 668 574 414 248 138 35 BanII G_rGCy'C Cuts at: 514 935 2432 2523 4870 5900 514 Size: 421 1497 91 2347 1030 2470 Fragments arranged by size: 2470 2347 1497 1030 421 91 BbeI G_GCGC'C Cuts at: 4302 5290 5538 4302 Size: 988 248 6620 Fragments arranged by size: 6620 988 248 BbsI GAAGACnn'nnnn_ Cuts at: 333 4768 333 Size: 4435 3421 BbvCI CC'TCA_GC Cuts at: 1913 3166 1913 Size: 1253 6603 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 820 854 820 Size: 34 7822 BciVI GTATCCnnnnn_n' Cuts at: 5754 6810 7856 5754 Size: 1056 1046 5754 Fragments arranged by size: 5754 1056 1046 BclI T'GATC_A Cuts at: 3630 4359 5376 3630 Size: 729 1017 6110 Fragments arranged by size: 6110 1017 729 BglI GCCn_nnn'nGGC Cuts at: 731 731 Size: 7856 BglII A'GATC_T Cuts at: 5371 7408 5371 Size: 2037 5819 BlpI GC'TnA_GC Cuts at: 646 4968 646 Size: 4322 3534 Bme1580I G_kGCm'C Cuts at: 825 2727 2957 3393 3817 5481 5574 6698 825 Size: 1902 230 436 424 1664 93 1124 1983 Fragments arranged by size: 1983 1902 1664 1124 436 424 230 93 BmgBI CAC'GTC Cuts at: 632 1702 632 Size: 1070 6786 BmrI ACTGGGnnnn_n' Cuts at: 751 874 2110 2744 3301 3388 5068 5149 5484 Size: 123 1236 634 557 87 1680 81 335 Cuts at: 5484 7628 751 Size: 2144 979 Fragments arranged by size: 2144 1680 1236 979 634 557 335 123 87 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 540 1959 2598 3861 3973 6223 540 Size: 1419 639 1263 112 2250 2173 Fragments arranged by size: 2250 2173 1419 1263 639 112 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 386 919 1021 1462 2190 3037 3743 386 Size: 533 102 441 728 847 706 4499 Fragments arranged by size: 4499 847 728 706 533 441 102 Bpu10I CC'TnA_GC Cuts at: 292 1913 3046 3166 292 Size: 1621 1133 120 4982 Fragments arranged by size: 4982 1621 1133 120 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 679 2568 3136 3663 3771 5032 5911 6625 6923 Size: 1889 568 527 108 1261 879 714 298 Cuts at: 6923 679 Size: 1612 Fragments arranged by size: 1889 1612 1261 879 714 568 527 298 108 BsaI GGTCTCn'nnnn_ Cuts at: 3721 3832 4018 4612 7560 3721 Size: 111 186 594 2948 4017 Fragments arranged by size: 4017 2948 594 186 111 BsaAI yAC'GTr Cuts at: 5209 5209 Size: 7856 BsaBI GATnn'nnATC Cuts at: 6 4208 5370 7407 6 Size: 4202 1162 2037 455 Fragments arranged by size: 4202 2037 1162 455 BsaHI Gr'CG_yC Cuts at: 1028 2309 2367 3610 4299 5287 5535 6237 7733 Size: 1281 58 1243 689 988 248 702 1496 Cuts at: 7733 1028 Size: 1151 Fragments arranged by size: 1496 1281 1243 1151 988 702 689 248 58 BsaWI w'CCGG_w Cuts at: 4184 5045 5566 6244 6655 6802 7076 4184 Size: 861 521 678 411 147 274 4964 Fragments arranged by size: 4964 861 678 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1933 1963 3559 3589 4228 4258 1933 Size: 30 1596 30 639 30 5531 Fragments arranged by size: 5531 1596 639 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 566 823 2004 3139 3580 566 Size: 257 1181 1135 441 4842 Fragments arranged by size: 4842 1181 1135 441 257 BseYI C'CCAG_C Cuts at: 1424 1904 2236 2338 3331 4622 5281 6039 6704 Size: 480 332 102 993 1291 659 758 665 Cuts at: 6704 7112 1424 Size: 408 2168 Fragments arranged by size: 2168 1291 993 758 665 659 480 408 332 102 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 982 3088 4216 4771 982 Size: 2106 1128 555 4067 Fragments arranged by size: 4067 2106 1128 555 BsiEI CG_ry'CG Cuts at: 104 5398 5444 6674 104 Size: 5294 46 1230 1286 Fragments arranged by size: 5294 1286 1230 46 BsiHKAI G_wGCw'C Cuts at: 514 647 935 1067 2957 4870 5648 5838 6698 Size: 133 288 132 1890 1913 778 190 860 Cuts at: 6698 514 Size: 1672 Fragments arranged by size: 1913 1890 1672 860 778 288 190 133 132 BsmI GAATG_Cn' Cuts at: 1052 1120 1052 Size: 68 7788 BsmBI CGTCTCn'nnnn_ Cuts at: 894 2316 2616 894 Size: 1422 300 6134 Fragments arranged by size: 6134 1422 300 Bsp1286I G_dGCh'C Cuts at: 514 647 825 935 1067 2432 2523 2727 2957 Size: 133 178 110 132 1365 91 204 230 Cuts at: 2957 3393 3817 4870 5481 5574 5648 5838 5900 Size: 436 424 1053 611 93 74 190 62 Cuts at: 5900 6698 514 Size: 798 1672 Fragments arranged by size: 1672 1365 1053 798 611 436 424 230 204 190 178 133 132 110 93 91 74 62 BspHI T'CATG_A Cuts at: 1452 6288 1452 Size: 4836 3020 BspMI ACCTGCnnnn'nnnn_ Cuts at: 1057 1189 1508 2277 3754 4776 4906 5120 5422 Size: 132 319 769 1477 1022 130 214 302 Cuts at: 5422 5803 1057 Size: 381 3110 Fragments arranged by size: 3110 1477 1022 769 381 319 302 214 132 130 BsrBI CCG'CTC Cuts at: 50 404 611 1938 6148 6202 7686 7851 50 Size: 354 207 1327 4210 54 1484 165 55 Fragments arranged by size: 4210 1484 1327 354 207 165 55 54 BsrDI GCAATG_nn' Cuts at: 1136 3765 5768 1136 Size: 2629 2003 3224 Fragments arranged by size: 3224 2629 2003 BsrFI r'CCGG_y Cuts at: 2399 2800 3008 4412 5854 6035 2399 Size: 401 208 1404 1442 181 4220 Fragments arranged by size: 4220 1442 1404 401 208 181 BsrGI T'GTAC_A Cuts at: 3128 3157 4331 3128 Size: 29 1174 6653 Fragments arranged by size: 6653 1174 29 BssHII G'CGCG_C Cuts at: 4689 4689 Size: 7856 BssSI C'ACGA_G Cuts at: 6127 6835 6127 Size: 708 7148 BstAPI GCAn_nnn'nTGC Cuts at: 2961 3397 5233 2961 Size: 436 1836 5584 Fragments arranged by size: 5584 1836 436 BstBI TT'CG_AA Cuts at: 6217 6217 Size: 7856 BstEII G'GTnAC_C Cuts at: 4788 4788 Size: 7856 BstXI CCAn_nnnn'nTGG Cuts at: 1185 2118 2980 1185 Size: 933 862 6061 Fragments arranged by size: 6061 933 862 BstYI r'GATC_y Cuts at: 1 782 857 1299 1466 1769 3318 3988 4881 Size: 781 75 442 167 303 1549 670 893 Cuts at: 4881 5348 5371 5706 5952 6258 6270 6356 7408 Size: 467 23 335 246 306 12 86 1052 Cuts at: 7408 1 Size: 449 Fragments arranged by size: 1549 1052 893 781 670 467 449 442 335 306 303 246 167 86 75 23 12 BstZ17I GTA'TAC Cuts at: 689 689 Size: 7856 Bsu36I CC'TnA_GG Cuts at: 2450 3416 2450 Size: 966 6890 BtgI C'CryG_G Cuts at: 107 456 1583 2250 3704 107 Size: 349 1127 667 1454 4259 Fragments arranged by size: 4259 1454 1127 667 349 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 4505 5806 5987 6150 4505 Size: 1301 181 163 6211 Fragments arranged by size: 6211 1301 181 163 BtsI GCAGTG_nn' Cuts at: 186 994 1980 2197 2707 3795 5099 186 Size: 808 986 217 510 1088 1304 2943 Fragments arranged by size: 2943 1304 1088 986 808 510 217 ClaI AT'CG_AT Cuts at: 864 864 Size: 7856 DraI TTT'AAA Cuts at: 1391 3440 4855 1391 Size: 2049 1415 4392 Fragments arranged by size: 4392 2049 1415 DraIII CAC_nnn'GTG Cuts at: 776 1071 2961 3397 776 Size: 295 1890 436 5235 Fragments arranged by size: 5235 1890 436 295 DrdI GACnn_nn'nnGTC Cuts at: 367 916 5562 6906 367 Size: 549 4646 1344 1317 Fragments arranged by size: 4646 1344 1317 549 EaeI y'GGCC_r Cuts at: 1403 1733 2970 3209 4220 5441 5615 6006 6033 Size: 330 1237 239 1011 1221 174 391 27 Cuts at: 6033 7378 1403 Size: 1345 1881 Fragments arranged by size: 1881 1345 1237 1221 1011 391 330 239 174 27 EagI C'GGCC_G Cuts at: 5441 5441 Size: 7856 EarI CTCTTCn'nnn_ Cuts at: 488 962 2010 2150 3271 5879 6089 488 Size: 474 1048 140 1121 2608 210 2255 Fragments arranged by size: 2608 2255 1121 1048 474 210 140 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 795 1593 6064 6806 6952 7666 795 Size: 798 4471 742 146 714 985 Fragments arranged by size: 4471 985 798 742 714 146 EcoICRI GAG'CTC Cuts at: 512 933 4868 512 Size: 421 3935 3500 Fragments arranged by size: 3935 3500 421 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 386 919 1021 1462 2190 2673 2816 2962 3037 Size: 533 102 441 728 483 143 146 75 Cuts at: 3037 3548 3713 3743 3953 4780 5681 6113 6466 Size: 511 165 30 210 827 901 432 353 Cuts at: 6466 7128 386 Size: 662 1114 Fragments arranged by size: 1114 901 827 728 662 533 511 483 441 432 353 210 165 146 143 102 75 30 EcoNI CCTnn'n_nnAGG Cuts at: 2944 4783 2944 Size: 1839 6017 EcoO109I rG'GnC_Cy Cuts at: 452 918 1917 3342 3382 3412 4138 4755 4995 Size: 466 999 1425 40 30 726 617 240 Cuts at: 4995 452 Size: 3313 Fragments arranged by size: 3313 1425 999 726 617 466 240 40 30 EcoRI G'AATT_C Cuts at: 1522 1802 4860 1522 Size: 280 3058 4518 Fragments arranged by size: 4518 3058 280 EcoRV GAT'ATC Cuts at: 4470 4470 Size: 7856 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 1416 2024 5875 1416 Size: 608 3851 3397 Fragments arranged by size: 3851 3397 608 FspI TGC'GCA Cuts at: 5637 5637 Size: 7856 HaeII r_GCGC'y Cuts at: 702 726 4194 4302 4539 5290 5538 6768 7539 Size: 24 3468 108 237 751 248 1230 771 Cuts at: 7539 702 Size: 1019 Fragments arranged by size: 3468 1230 1019 771 751 248 237 108 24 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 316 348 368 400 799 831 896 928 939 Size: 32 20 32 399 32 65 32 11 Cuts at: 939 971 1489 1521 1933 1965 1987 2019 2560 Size: 32 518 32 412 32 22 32 541 Cuts at: 2560 2592 2833 2865 3026 3058 3559 3591 3615 Size: 32 241 32 161 32 501 32 24 Cuts at: 3615 3622 3647 3654 3973 4005 4373 4405 4557 Size: 7 25 7 319 32 368 32 152 Cuts at: 4557 4589 5698 5728 5730 5760 316 Size: 32 1109 30 2 30 2412 Fragments arranged by size: 2412 1109 541 518 501 412 399 368 319 241 161 152 65 32 32 32 32 32 32 32 32 32 32 32 32 32 32 32 30 30 25 24 22 20 11 7 7 2 HincII GTy'rAC Cuts at: 393 4895 393 Size: 4502 3354 HindIII A'AGCT_T Cuts at: 3506 3506 Size: 7856 HpaI GTT'AAC Cuts at: 393 393 Size: 7856 KasI G'GCGC_C Cuts at: 4298 5286 5534 4298 Size: 988 248 6620 Fragments arranged by size: 6620 988 248 KpnI G_GTAC'C Cuts at: 4164 4876 4164 Size: 712 7144 MluI A'CGCG_T Cuts at: 1636 7289 1636 Size: 5653 2203 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1240 2639 3100 3310 4088 6615 6799 1240 Size: 1399 461 210 778 2527 184 2297 Fragments arranged by size: 2527 2297 1399 778 461 210 184 MscI TGG'CCA Cuts at: 1405 1735 3211 4222 5617 1405 Size: 330 1476 1011 1395 3644 Fragments arranged by size: 3644 1476 1395 1011 330 MslI CAynn'nnrTG Cuts at: 982 1111 1183 2507 3649 3706 4483 4561 5845 Size: 129 72 1324 1142 57 777 78 1284 Cuts at: 5845 5972 982 Size: 127 2866 Fragments arranged by size: 2866 1324 1284 1142 777 129 127 78 72 57 MspA1I CmG'CkG Cuts at: 306 1170 1203 1866 1908 3030 3661 4365 4967 Size: 864 33 663 42 1122 631 704 602 Cuts at: 4967 5281 5641 6425 6670 306 Size: 314 360 784 245 1492 Fragments arranged by size: 1492 1122 864 784 704 663 631 602 360 314 245 42 33 NaeI GCC'GGC Cuts at: 2401 2802 3010 4414 6037 2401 Size: 401 208 1404 1623 4220 Fragments arranged by size: 4220 1623 1404 401 208 NarI GG'CG_CC Cuts at: 4299 5287 5535 4299 Size: 988 248 6620 Fragments arranged by size: 6620 988 248 NcoI C'CATG_G Cuts at: 107 1583 107 Size: 1476 6380 NgoMIV G'CCGG_C Cuts at: 2399 2800 3008 4412 6035 2399 Size: 401 208 1404 1623 4220 Fragments arranged by size: 4220 1623 1404 401 208 NspI r_CATG'y Cuts at: 2095 2506 4254 4447 4909 5409 7012 2095 Size: 411 1748 193 462 500 1603 2939 Fragments arranged by size: 2939 1748 1603 500 462 411 193 PasI CC'CwG_GG Cuts at: 2901 2901 Size: 7856 PciI A'CATG_T Cuts at: 2502 7008 2502 Size: 4506 3350 PfoI T'CCnGG_A Cuts at: 3101 3101 Size: 7856 PmeI GTTT'AAAC Cuts at: 4855 4855 Size: 7856 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 6302 6334 6302 Size: 32 7824 PpuMI rG'GwC_Cy Cuts at: 452 918 3342 3382 3412 4138 4755 452 Size: 466 2424 40 30 726 617 3553 Fragments arranged by size: 3553 2424 726 617 466 40 30 PshAI GACnn'nnGTC Cuts at: 1031 2366 4136 1031 Size: 1335 1770 4751 Fragments arranged by size: 4751 1770 1335 PspXI vC'TCGA_Gb Cuts at: 752 752 Size: 7856 PstI C_TGCA'G Cuts at: 536 1505 1619 1871 2138 4787 4903 5588 536 Size: 969 114 252 267 2649 116 685 2804 Fragments arranged by size: 2804 2649 969 685 267 252 116 114 PvuI CG_AT'CG Cuts at: 104 104 Size: 7856 PvuII CAG'CTG Cuts at: 1203 1866 1908 3030 3661 4365 5281 5641 1203 Size: 663 42 1122 631 704 916 360 3418 Fragments arranged by size: 3418 1122 916 704 663 631 360 42 RsrII CG'GwC_CG Cuts at: 6051 6051 Size: 7856 SacI G_AGCT'C Cuts at: 514 935 4870 514 Size: 421 3935 3500 Fragments arranged by size: 3935 3500 421 SalI G'TCGA_C Cuts at: 4893 4893 Size: 7856 SanDI GG'GwC_CC Cuts at: 452 3342 4138 452 Size: 2890 796 4170 Fragments arranged by size: 4170 2890 796 SapI GCTCTTCn'nnn_ Cuts at: 962 2010 2150 5879 6089 962 Size: 1048 140 3729 210 2729 Fragments arranged by size: 3729 2729 1048 210 140 SbfI CC_TGCA'GG Cuts at: 4903 4903 Size: 7856 ScaI AGT'ACT Cuts at: 624 1756 7373 624 Size: 1132 5617 1107 Fragments arranged by size: 5617 1132 1107 SexAI A'CCwGG_T Cuts at: 3774 3774 Size: 7856 SfcI C'TryA_G Cuts at: 33 532 714 1078 1501 1615 1867 2134 3252 Size: 499 182 364 423 114 252 267 1118 Cuts at: 3252 4783 4899 5584 6552 6743 33 Size: 1531 116 685 968 191 1146 Fragments arranged by size: 1531 1146 1118 968 685 499 423 364 267 252 191 182 116 114 SfoI GGC'GCC Cuts at: 4300 5288 5536 4300 Size: 988 248 6620 Fragments arranged by size: 6620 988 248 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 7856 SgrAI Cr'CCGG_yG Cuts at: 2399 2399 Size: 7856 SmaI CCC'GGG Cuts at: 2808 4878 2808 Size: 2070 5786 SmlI C'TyrA_G Cuts at: 694 752 2547 3151 3678 3750 5011 5926 6640 Size: 58 1795 604 527 72 1261 915 714 Cuts at: 6640 6902 694 Size: 262 1648 Fragments arranged by size: 1795 1648 1261 915 714 604 527 262 72 58 SpeI A'CTAG_T Cuts at: 67 67 Size: 7856 SphI G_CATG'C Cuts at: 4909 5409 4909 Size: 500 7356 StuI AGG'CCT Cuts at: 853 1399 1488 3525 853 Size: 546 89 2037 5184 Fragments arranged by size: 5184 2037 546 89 StyI C'CwwG_G Cuts at: 107 224 596 1007 1400 1583 2019 3552 3732 Size: 117 372 411 393 183 436 1533 180 Cuts at: 3732 3972 4170 4990 5344 107 Size: 240 198 820 354 2619 Fragments arranged by size: 2619 1533 820 436 411 393 372 354 240 198 183 180 117 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1438 3190 4723 5439 5572 6031 6240 1438 Size: 1752 1533 716 133 459 209 3054 Fragments arranged by size: 3054 1752 1533 716 459 209 133 TatI w'GTAC_w Cuts at: 622 1754 3128 3157 4331 4661 7371 622 Size: 1132 1374 29 1174 330 2710 1107 Fragments arranged by size: 2710 1374 1174 1132 1107 330 29 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 228 260 760 792 7373 7405 228 Size: 32 500 32 6581 32 679 Fragments arranged by size: 6581 679 500 32 32 32 Tth111I GACn'n_nGTC Cuts at: 2029 3640 5653 2029 Size: 1611 2013 4232 Fragments arranged by size: 4232 2013 1611 XbaI T'CTAG_A Cuts at: 4887 4887 Size: 7856 XcmI CCAnnnn_n'nnnnTGG Cuts at: 1113 1437 1581 2506 5351 1113 Size: 324 144 925 2845 3618 Fragments arranged by size: 3618 2845 925 324 144 XhoI C'TCGA_G Cuts at: 752 752 Size: 7856 XmaI C'CCGG_G Cuts at: 2806 4876 2806 Size: 2070 5786 XmnI GAAnn'nnTTC Cuts at: 124 1488 124 Size: 1364 6492 ZraI GAC'GTC Cuts at: 2368 3611 2368 Size: 1243 6613 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AfeI AflIII AhdI AleI AlfI AlwNI ApaLI ApoI AseI AsiSI AvaI AvrII BaeI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI BstZ17I Bsu36I BtgI BtgZI BtsI ClaI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII HindIII HpaI KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NspI PasI PciI PfoI PmeI PpiI PpuMI PshAI PspXI PstI PvuI PvuII RsrII SacI SalI SanDI SapI SbfI ScaI SexAI SfcI SfoI SgfI SgrAI SmaI SmlI SpeI SphI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI Enzymes that do not cut: AflII AgeI AloI ApaI AscI BfrBI BmtI BsiWI BspEI CspCI FseI FspAI MfeI NdeI NheI NotI NruI NsiI PacI PflMI PmlI PsiI PspOMI PsrI SacII SfiI SnaBI SrfI SspI SwaI