Result of FASTA (ccds) for
pF1KA0399
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0399, 2961 aa
1>>>pF1KA0399 2961 - 2961 aa - 2961 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5566+/-0.00118; mu= 16.9530+/- 0.071
mean_var=143.4216+/-27.608, 0's: 0 Z-trim(106.6): 41 B-trim: 0 in 0/53
Lambda= 0.107094
statistics sampled from 9062 (9080) to 9062 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.279), width: 16
Scan time: 7.690
The best scores are: opt bits E(32554)
CCDS11043.1 ZZEF1 gene_id:23140|Hs108|chr17 (2961) 19769 3068.2 0
>>CCDS11043.1 ZZEF1 gene_id:23140|Hs108|chr17 (2961 aa)
initn: 19769 init1: 19769 opt: 19769 Z-score: 16502.7 bits: 3068.2 E(32554): 0
Smith-Waterman score: 19769; 99.9% identity (100.0% similar) in 2961 aa overlap (1-2961:1-2961)
10 20 30 40 50 60
pF1KA0 MGNAPSHSSEDEAAAAGGEGWGPHQDWAAVSGTTPGPGVAAPALPPAAALLEPARLREAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MGNAPSHSSEDEAAAAGGEGWGPHQDWAAVSGTTPGPGVAAPALPPAAALLEPARLREAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 AALLPTPPCESLVSRHRGALFRWLEERLGRGEESVTLEQFRELLEARGAGCSSEQFEEAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AALLPTPPCESLVSRHRGALFRWLEERLGRGEESVTLEQFRELLEARGAGCSSEQFEEAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 AQFDAEGDGTVDAENMLEALKNSSGANLQGELSHIIRQLQACSLVPGFTDIFSESKEGLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AQFDAEGDGTVDAENMLEALKNSSGANLQGELSHIIRQLQACSLVPGFTDIFSESKEGLD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 IHSSMILRFLHRNRLSSAVMPYPMLEHCNNMCTMRSSVLKESLDQLVQKEKESPGDLTRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IHSSMILRFLHRNRLSSAVMPYPMLEHCNNMCTMRSSVLKESLDQLVQKEKESPGDLTRS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 PEMDKLKSVAKCYAYIETSSNSADIDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PEMDKLKSVAKCYAYIETSSNSADIDKMTNGETSSYWQSDGSACSHWIRLKMKPDVVLRH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 LSIAVAATDQSYMPQQVTVAVGRNASDLQEVRDVHIPSNVTGYVTLLENANVSQLYVQIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LSIAVAATDQSYMPQQVTVAVGRNASDLQEVRDVHIPSNVTGYVTLLENANVSQLYVQIN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 IKRCLSDGCDTRIHGLRAVGFQRVKKSGVSVSDASAIWYWSLLTSLVTASMETNPAFVQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IKRCLSDGCDTRIHGLRAVGFQRVKKSGVSVSDASAIWYWSLLTSLVTASMETNPAFVQT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 VLHNTQKALRHMPPLSLSPGSTDFSTFLSPNVLEEVDSFLIRITSCCSTPEVELTLLAFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VLHNTQKALRHMPPLSLSPGSTDFSTFLSPNVLEEVDSFLIRITSCCSTPEVELTLLAFA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 LARGSVAKVMSSLCTITDHLDTQYDASSLILSMASVRQNLLLKYGKPLQLTLQACDVKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LARGSVAKVMSSLCTITDHLDTQYDASSLILSMASVRQNLLLKYGKPLQLTLQACDVKGK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 EDKSGPENLLVEPWTRDGFLTETGKTRASTIFSTGTESAFQVTQIRIMVRRGGIGAQCGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EDKSGPENLLVEPWTRDGFLTETGKTRASTIFSTGTESAFQVTQIRIMVRRGGIGAQCGL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 VFAYNSSSDKFCAEEHFKRFEKYDKWKLQELRQFVKSRIGCSSDDLGEDDPIGWFELEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VFAYNSSSDKFCAEEHFKRFEKYDKWKLQELRQFVKSRIGCSSDDLGEDDPIGWFELEEE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 WDEADVKLQQCRVAKYLMVKFLCTRQESAERLGVQGLTISGYLRPARAEAEQSVTCAHCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 WDEADVKLQQCRVAKYLMVKFLCTRQESAERLGVQGLTISGYLRPARAEAEQSVTCAHCR
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 KDTEESVCGATLLLRTLQFIQQLAHDLVQQKESGLKYKSFLDFAGLDLQIFWNFYSKLKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KDTEESVCGATLLLRTLQFIQQLAHDLVQQKESGLKYKSFLDFAGLDLQIFWNFYSKLKQ
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 NPREECVSAQTLLLQLLQSCFSVLQGDVLAASEEEKAPIQSPKGVEAAKELYTHLCDVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NPREECVSAQTLLLQLLQSCFSVLQGDVLAASEEEKAPIQSPKGVEAAKELYTHLCDVVD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 KVDGDSVPMEILKQEVRNTLLNGAAIFFPNRQTRRNHLFTMMNVTEQEHKQSLQLTFRSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KVDGDSVPMEILKQEVRNTLLNGAAIFFPNRQTRRNHLFTMMNVTEQEHKQSLQLTFRSL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 CTYFSDKDPGGLLLLPEKNDLAKMNISEVLAVMDTLVSVAARECELLMLSGAPGEVGSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
CCDS11 CTYFSDKDPGGLLLLPEKNDLAKMNISEVLAVMDTLVSVAARECELLMLSGAPGEVGSVL
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 FSLFWSVQGSLLSWCYLQLKSTDSGAKDLAVDLIEKYVGQFLASMRAILESLFSQYSGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FSLFWSVQGSLLSWCYLQLKSTDSGAKDLAVDLIEKYVGQFLASMRAILESLFSQYSGKT
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 IVERLCNSVFSMAARQLVIFLLDFCTLDIPHCVLLREFSVLTELLKKLCSGPEGGLRKLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IVERLCNSVFSMAARQLVIFLLDFCTLDIPHCVLLREFSVLTELLKKLCSGPEGGLRKLD
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 VETWQQEQPVVLHTWTKESAHNYENNCHEVSVFVSPGATYFEVEFDDRCETEKRYDYLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VETWQQEQPVVLHTWTKESAHNYENNCHEVSVFVSPGATYFEVEFDDRCETEKRYDYLEF
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 TDARGRKTRYDTKVGTDKWPKKVTFKAGPRLQFLFHSDSSHNEWGYKFTVTACGLPDVAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TDARGRKTRYDTKVGTDKWPKKVTFKAGPRLQFLFHSDSSHNEWGYKFTVTACGLPDVAV
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 SWGLDLQLLVSRLMGRLASQCMALKSVRQLGSNMVVPQAKMALVLSSPLWKPVFRHQVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SWGLDLQLLVSRLMGRLASQCMALKSVRQLGSNMVVPQAKMALVLSSPLWKPVFRHQVCP
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 ELELEASWPTHPHRNSKEVKNIPDDPCRHFLLDFAQSEPAQNFCGPYSELFKGFIQACRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ELELEASWPTHPHRNSKEVKNIPDDPCRHFLLDFAQSEPAQNFCGPYSELFKGFIQACRK
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 QAPKTDIVAGSTIDQAVNATFAALVYRTPDLYEKLQKYVNSGGKIALSEEFAQVYSLADG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QAPKTDIVAGSTIDQAVNATFAALVYRTPDLYEKLQKYVNSGGKIALSEEFAQVYSLADG
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 IRIWMLEMKQKSLMSLGNEAEEKHSSEATEVNPESLAKECIEKSLLLLKFLPTGISSKES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IRIWMLEMKQKSLMSLGNEAEEKHSSEATEVNPESLAKECIEKSLLLLKFLPTGISSKES
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 CEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSPGLGTQPKLPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 CEKLETADETSHLQPLNKRQRTSSVVEEHFQASVSPTEAAPPATGDQSPGLGTQPKLPSS
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 SGLPAADVSPATAEEPLSPSTPTRRPPFTRGRLRLLSFRSMEEARLVPTVKEKYPVLKDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SGLPAADVSPATAEEPLSPSTPTRRPPFTRGRLRLLSFRSMEEARLVPTVKEKYPVLKDV
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 MDFIKDQSLSHRSVVKVLSLRKAQAQSILEVLKITQHCAESLGQPHCFHPPFILFLLELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MDFIKDQSLSHRSVVKVLSLRKAQAQSILEVLKITQHCAESLGQPHCFHPPFILFLLELL
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 TCQKDFTNYFGHLEGCGADLHKEIRDTYYQLVLFLVKAVKGFSSLNDRSLLPALSCVQTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TCQKDFTNYFGHLEGCGADLHKEIRDTYYQLVLFLVKAVKGFSSLNDRSLLPALSCVQTA
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA0 LLHLLDMGWEPNDLAFFVDIQLPDLLMKMSQENISVHDSVISQWSEEDELADAKQNSEWM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LLHLLDMGWEPNDLAFFVDIQLPDLLMKMSQENISVHDSVISQWSEEDELADAKQNSEWM
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA0 DECQDGMFEAWYEKIAQEDPEKQRKMHMFIARYCDLLNVDISCDGCDEIAPWHRYRCLQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DECQDGMFEAWYEKIAQEDPEKQRKMHMFIARYCDLLNVDISCDGCDEIAPWHRYRCLQC
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA0 SDMDLCKTCFLGGVKPEGHGDDHEMVNMEFTCDHCQGLIIGRRMNCNVCDDFDLCYGCYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SDMDLCKTCFLGGVKPEGHGDDHEMVNMEFTCDHCQGLIIGRRMNCNVCDDFDLCYGCYA
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KA0 AKKYSYGHLPTHSITAHPMVTIRISDRQRLIQPYIHNYSWLLFAALALYSAHLASAEDVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AKKYSYGHLPTHSITAHPMVTIRISDRQRLIQPYIHNYSWLLFAALALYSAHLASAEDVD
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KA0 GEKLDPQTRSSATTLRSQCMQLVGDCLMKAHQGKGLKALALLGVLPDGDSSPEDQALPVT
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
CCDS11 GEKLDPQTRSSATTLRSQCMQLVGDCLMKAHQGKGLKALALLGVLPDGDSSLEDQALPVT
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KA0 VPTGASEEQLEKKAVQGAELSEAGNGKRAVHEEVRPVDFKQRNKADKGVSLSKDPSCQTQ
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
CCDS11 VPTGASEEQLEKKAVQGAELSEAGNGKRAVHEEIRPVDFKQRNKADKGVSLSKDPSCQTQ
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KA0 ISDSPADASPPTGLPDAEDSEVSSQKPIEEKAVTPSPEQVFAECSQKRILGLLAAMLPPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ISDSPADASPPTGLPDAEDSEVSSQKPIEEKAVTPSPEQVFAECSQKRILGLLAAMLPPL
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KA0 KSGPTVPLIDLEHVLPLMFQVVISNAGHLNETYHLTLGLLGQLIIRLLPAEVDAAVIKVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KSGPTVPLIDLEHVLPLMFQVVISNAGHLNETYHLTLGLLGQLIIRLLPAEVDAAVIKVL
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KA0 SAKHNLFAAGDSSIVPDGWKTTHLLFSLGAVCLDSRVGLDWACSMAEILRSLNSAPLWRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SAKHNLFAAGDSSIVPDGWKTTHLLFSLGAVCLDSRVGLDWACSMAEILRSLNSAPLWRD
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260 2270 2280
pF1KA0 VIATFTDHCIKQLPFQLKHTNIFTLLVLVGFPQVLCVGTRCVYMDNANEPHNVIILKHFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VIATFTDHCIKQLPFQLKHTNIFTLLVLVGFPQVLCVGTRCVYMDNANEPHNVIILKHFT
2230 2240 2250 2260 2270 2280
2290 2300 2310 2320 2330 2340
pF1KA0 EKNRAVIVDVKTRKRKTVKDYQLVQKGGGQECGDSRAQLSQYSQHFAFIASHLLQSSMDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EKNRAVIVDVKTRKRKTVKDYQLVQKGGGQECGDSRAQLSQYSQHFAFIASHLLQSSMDS
2290 2300 2310 2320 2330 2340
2350 2360 2370 2380 2390 2400
pF1KA0 HCPEAVEATWVLSLALKGLYKTLKAHGFQEIRATFLQTDLLKLLVKKCSKGTGFSKTWLL
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
CCDS11 HCPEAVEATWVLSLALKGLYKTLKAHGFEEIRATFLQTDLLKLLVKKCSKGTGFSKTWLL
2350 2360 2370 2380 2390 2400
2410 2420 2430 2440 2450 2460
pF1KA0 RDLEILSIMLYSSKKEINALAEHGDLELDERGDREEEVERPVSSPGDPEQKKLDPLEGLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RDLEILSIMLYSSKKEINALAEHGDLELDERGDREEEVERPVSSPGDPEQKKLDPLEGLD
2410 2420 2430 2440 2450 2460
2470 2480 2490 2500 2510 2520
pF1KA0 EPTRICFLMAHDALNAPLHILRAIYELQMKKTDYFFLEVQKRFDGDELTTDERIRSLAQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EPTRICFLMAHDALNAPLHILRAIYELQMKKTDYFFLEVQKRFDGDELTTDERIRSLAQR
2470 2480 2490 2500 2510 2520
2530 2540 2550 2560 2570 2580
pF1KA0 WQPSKSLRLEEQSAKAVDTDMIILPCLSRPARCDQATAESNPVTQKLISSTESELQQSYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 WQPSKSLRLEEQSAKAVDTDMIILPCLSRPARCDQATAESNPVTQKLISSTESELQQSYA
2530 2540 2550 2560 2570 2580
2590 2600 2610 2620 2630 2640
pF1KA0 KQRRSKSAALLHKELNCKSKRAVRDYLFRVNEATAVLYARHVLASLLAEWPSHVPVSEDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KQRRSKSAALLHKELNCKSKRAVRDYLFRVNEATAVLYARHVLASLLAEWPSHVPVSEDI
2590 2600 2610 2620 2630 2640
2650 2660 2670 2680 2690 2700
pF1KA0 LELSGPAHMTYILDMFMQLEEKHEWEKILQKVLQGCREDMLGTMALAACQFMEEPGMEVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LELSGPAHMTYILDMFMQLEEKHEWEKILQKVLQGCREDMLGTMALAACQFMEEPGMEVQ
2650 2660 2670 2680 2690 2700
2710 2720 2730 2740 2750 2760
pF1KA0 VRESKHPYNNNTNFEDKVHIPGAIYLSIKFDSQCNTEEGCDELAMSSSSDFQQDRHSFSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VRESKHPYNNNTNFEDKVHIPGAIYLSIKFDSQCNTEEGCDELAMSSSSDFQQDRHSFSG
2710 2720 2730 2740 2750 2760
2770 2780 2790 2800 2810 2820
pF1KA0 SQQKWKDFELPGDTLYYRFTSDMSNTEWGYRFTVTAGHLGRFQTGFEILKQMLSEERVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SQQKWKDFELPGDTLYYRFTSDMSNTEWGYRFTVTAGHLGRFQTGFEILKQMLSEERVVP
2770 2780 2790 2800 2810 2820
2830 2840 2850 2860 2870 2880
pF1KA0 HLPLAKIWEWLVGVACRQTGHQRLKAIHLLLRIVRCCGHSDLCDLALLKPLWQLFTHMEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HLPLAKIWEWLVGVACRQTGHQRLKAIHLLLRIVRCCGHSDLCDLALLKPLWQLFTHMEY
2830 2840 2850 2860 2870 2880
2890 2900 2910 2920 2930 2940
pF1KA0 GLFEDVTQPGILLPLHRALTELFFVTENRAQELGVLQDYLLALTTDDHLLRCAAQALQNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GLFEDVTQPGILLPLHRALTELFFVTENRAQELGVLQDYLLALTTDDHLLRCAAQALQNI
2890 2900 2910 2920 2930 2940
2950 2960
pF1KA0 AAISLAINYPNKATRLWNVEC
:::::::::::::::::::::
CCDS11 AAISLAINYPNKATRLWNVEC
2950 2960
2961 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 09:35:04 2016 done: Thu Nov 3 09:35:06 2016
Total Scan time: 7.690 Total Display time: 0.470
Function used was FASTA [36.3.4 Apr, 2011]