Result of FASTA (ccds) for
pF1KA0428
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0428, 370 aa
1>>>pF1KA0428 370 - 370 aa - 370 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8994+/-0.000922; mu= 11.1120+/- 0.056
mean_var=138.9173+/-27.833, 0's: 0 Z-trim(111.1): 25 B-trim: 280 in 1/51
Lambda= 0.108817
statistics sampled from 12118 (12141) to 12118 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.373), width: 16
Scan time: 2.780
The best scores are: opt bits E(32554)
CCDS3164.1 MBNL1 gene_id:4154|Hs108|chr3 ( 370) 2496 403.0 2.1e-112
CCDS3163.1 MBNL1 gene_id:4154|Hs108|chr3 ( 382) 2216 359.1 3.7e-99
CCDS3168.1 MBNL1 gene_id:4154|Hs108|chr3 ( 342) 2197 356.0 2.7e-98
CCDS3165.1 MBNL1 gene_id:4154|Hs108|chr3 ( 388) 1858 302.9 3.1e-82
CCDS3167.1 MBNL1 gene_id:4154|Hs108|chr3 ( 340) 1849 301.4 7.6e-82
CCDS9484.1 MBNL2 gene_id:10150|Hs108|chr13 ( 367) 1678 274.6 9.6e-74
CCDS76644.1 MBNL2 gene_id:10150|Hs108|chr13 ( 373) 1654 270.8 1.3e-72
CCDS9483.1 MBNL2 gene_id:10150|Hs108|chr13 ( 361) 1647 269.7 2.8e-72
CCDS82864.1 MBNL1 gene_id:4154|Hs108|chr3 ( 343) 1448 238.5 6.8e-63
CCDS14633.1 MBNL3 gene_id:55796|Hs108|chrX ( 354) 1396 230.3 2e-60
CCDS14634.1 MBNL3 gene_id:55796|Hs108|chrX ( 334) 1278 211.8 7.2e-55
CCDS54656.1 MBNL1 gene_id:4154|Hs108|chr3 ( 302) 1249 207.2 1.6e-53
CCDS55493.1 MBNL3 gene_id:55796|Hs108|chrX ( 292) 1243 206.2 2.9e-53
CCDS55494.1 MBNL3 gene_id:55796|Hs108|chrX ( 304) 1210 201.1 1.1e-51
CCDS55492.1 MBNL3 gene_id:55796|Hs108|chrX ( 258) 969 163.2 2.4e-40
CCDS3166.1 MBNL1 gene_id:4154|Hs108|chr3 ( 314) 969 163.2 2.8e-40
>>CCDS3164.1 MBNL1 gene_id:4154|Hs108|chr3 (370 aa)
initn: 2496 init1: 2496 opt: 2496 Z-score: 2131.4 bits: 403.0 E(32554): 2.1e-112
Smith-Waterman score: 2496; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
310 320 330 340 350 360
370
pF1KA0 LTSHKYVTQM
::::::::::
CCDS31 LTSHKYVTQM
370
>>CCDS3163.1 MBNL1 gene_id:4154|Hs108|chr3 (382 aa)
initn: 2479 init1: 2200 opt: 2216 Z-score: 1893.6 bits: 359.1 E(32554): 3.7e-99
Smith-Waterman score: 2462; 96.9% identity (96.9% similar) in 382 aa overlap (1-370:1-382)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340
pF1KA0 QYQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATA
:::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS31 QYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATA
310 320 330 340 350 360
350 360 370
pF1KA0 TANQIPIISAEHLTSHKYVTQM
::::::::::::::::::::::
CCDS31 TANQIPIISAEHLTSHKYVTQM
370 380
>>CCDS3168.1 MBNL1 gene_id:4154|Hs108|chr3 (342 aa)
initn: 2191 init1: 2191 opt: 2197 Z-score: 1878.1 bits: 356.0 E(32554): 2.7e-98
Smith-Waterman score: 2197; 97.9% identity (98.5% similar) in 331 aa overlap (1-331:1-330)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
:::::::::::::::::::: .. ::::
CCDS31 QYQQALANMQLQQHTAFLPPGSILC-MTPATSVDTHNICRTSD
310 320 330 340
370
pF1KA0 LTSHKYVTQM
>>CCDS3165.1 MBNL1 gene_id:4154|Hs108|chr3 (388 aa)
initn: 1847 init1: 1847 opt: 1858 Z-score: 1589.8 bits: 302.9 E(32554): 3.1e-82
Smith-Waterman score: 2450; 95.4% identity (95.4% similar) in 388 aa overlap (1-370:1-388)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAM------------------GIPQAVLPPLPKR
::::::::::::::::::::::::::::: :::::::::::::
CCDS31 AHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKR
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA0 PALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSV
310 320 330 340 350 360
350 360 370
pF1KA0 PFAATATANQIPIISAEHLTSHKYVTQM
::::::::::::::::::::::::::::
CCDS31 PFAATATANQIPIISAEHLTSHKYVTQM
370 380
>>CCDS3167.1 MBNL1 gene_id:4154|Hs108|chr3 (340 aa)
initn: 1952 init1: 1847 opt: 1849 Z-score: 1582.9 bits: 301.4 E(32554): 7.6e-82
Smith-Waterman score: 1938; 81.6% identity (86.2% similar) in 370 aa overlap (1-370:1-340)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::: .: .. : : .
CCDS31 AHLQAKIKAAQYQVNQAAAAQAAATAAAM-FPWCTVLRQPLCPQQQ--------------
250 260 270 280
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
. :.. ..: : : :.. ..: .::: : :: ...::::::::
CCDS31 HLPQVFPSLQQPQ-----PTSPILDAST-------LLGATSCPAAA---GKMIPIISAEH
290 300 310 320 330
370
pF1KA0 LTSHKYVTQM
::::::::::
CCDS31 LTSHKYVTQM
340
>>CCDS9484.1 MBNL2 gene_id:10150|Hs108|chr13 (367 aa)
initn: 1510 init1: 634 opt: 1678 Z-score: 1437.4 bits: 274.6 E(32554): 9.6e-74
Smith-Waterman score: 1781; 73.5% identity (88.1% similar) in 370 aa overlap (1-353:1-364)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::..:.:.::::::::::::.:::::::: : ::::::: ::::::::::::::::::::
CCDS94 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMA-MLAQQMQLANAMMPGAPLQPVPMFS
:::::::::::: ::::::::::::::::::. : :::::::. :.::.::.::: :
CCDS94 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP
70 80 90 100 110
120 130 140 150 160 170
pF1KA0 VAPSLATNASAAAFNPYLGPVSPS--LVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM
:.:...:: .: .: :::.::.:. :::.:::::.:..: :.: : ::...:. :::.
CCDS94 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTAT--QKLL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA0 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF
:::.::::::.::::: :::.:::::::::::::::.::::::::::::::: :::::::
CCDS94 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAAA-MGIPQAVLPPLPKRPALEKTNGATAVF
::::::::::::::.:.:::: ::::::.::. :..: ..: ::::: ::::.::..:::
CCDS94 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF
240 250 260 270 280 290
300 310 320 330 340
pF1KA0 NTGIFQYQQALANMQLQQHTAFLP--------P----VPMVHGATPATVSAATTSATSVP
: ....:::::.. :::::.::.: : :::.:.:: :::::::: :::::
CCDS94 NPSVLHYQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVP
300 310 320 330 340 350
350 360 370
pF1KA0 FAATATANQIPIISAEHLTSHKYVTQM
::::::::::
CCDS94 FAATATANQIILK
360
>>CCDS76644.1 MBNL2 gene_id:10150|Hs108|chr13 (373 aa)
initn: 1494 init1: 634 opt: 1654 Z-score: 1416.9 bits: 270.8 E(32554): 1.3e-72
Smith-Waterman score: 1654; 73.5% identity (89.3% similar) in 336 aa overlap (1-331:1-329)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::..:.:.::::::::::::.:::::::: : ::::::: ::::::::::::::::::::
CCDS76 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMA-MLAQQMQLANAMMPGAPLQPVPMFS
:::::::::::: ::::::::::::::::::. : :::::::. :.::.::.::: :
CCDS76 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP
70 80 90 100 110
120 130 140 150 160 170
pF1KA0 VAPSLATNASAAAFNPYLGPVSPS--LVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM
:.:...:: .: .: :::.::.:. :::.:::::.:..: :.: : ::...: .:::.
CCDS76 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTA--TQKLL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA0 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF
:::.::::::.::::: :::.:::::::::::::::.::::::::::::::: :::::::
CCDS76 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAAA-MGIPQAVLPPLPKRPALEKTNGATAVF
::::::::::::::.:.:::: ::::::.::. :..: ..: ::::: ::::.::..:::
CCDS76 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF
240 250 260 270 280 290
300 310 320 330 340 350
pF1KA0 NTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPI
: ....:::::.. :::::.::.: . : ::::
CCDS76 NPSVLHYQQALTSAQLQQHAAFIP-TGSVLCMTPATSIDNSEIISRNGMECQESALRITK
300 310 320 330 340 350
360 370
pF1KA0 ISAEHLTSHKYVTQM
CCDS76 HCYCTYYPVSSSIELPQTAC
360 370
>>CCDS9483.1 MBNL2 gene_id:10150|Hs108|chr13 (361 aa)
initn: 1494 init1: 634 opt: 1647 Z-score: 1411.2 bits: 269.7 E(32554): 2.8e-72
Smith-Waterman score: 1647; 74.7% identity (90.7% similar) in 324 aa overlap (1-319:1-318)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::..:.:.::::::::::::.:::::::: : ::::::: ::::::::::::::::::::
CCDS94 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMA-MLAQQMQLANAMMPGAPLQPVPMFS
:::::::::::: ::::::::::::::::::. : :::::::. :.::.::.::: :
CCDS94 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQF---MFPGTPLHPVPTFP
70 80 90 100 110
120 130 140 150 160 170
pF1KA0 VAPSLATNASAAAFNPYLGPVSPS--LVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLM
:.:...:: .: .: :::.::.:. :::.:::::.:..: :.: : ::...:. :::.
CCDS94 VGPAIGTN-TAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTAT--QKLL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA0 RTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYF
:::.::::::.::::: :::.:::::::::::::::.::::::::::::::: :::::::
CCDS94 RTDKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 HPPAHLQAKIKAAQYQVNQAA-AAQAAATAAA-MGIPQAVLPPLPKRPALEKTNGATAVF
::::::::::::::.:.:::: ::::::.::. :..: ..: ::::: ::::.::..:::
CCDS94 HPPAHLQAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVF
240 250 260 270 280 290
300 310 320 330 340 350
pF1KA0 NTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPI
: ....:::::.. :::::.::.:
CCDS94 NPSVLHYQQALTSAQLQQHAAFIPTDNSEIISRNGMECQESALRITKHCYCTYYPVSSSI
300 310 320 330 340 350
>>CCDS82864.1 MBNL1 gene_id:4154|Hs108|chr3 (343 aa)
initn: 1779 init1: 1437 opt: 1448 Z-score: 1242.6 bits: 238.5 E(32554): 6.8e-63
Smith-Waterman score: 2006; 91.2% identity (91.2% similar) in 342 aa overlap (59-370:2-343)
30 40 50 60 70 80
pF1KA0 RPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPHLKTQLEINGRNNLI
::::::::::::::::::::::::::::::
CCDS82 MGRCSRENCKYLHPPPHLKTQLEINGRNNLI
10 20 30
90 100 110 120 130 140
pF1KA0 QQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAAFNPYLGPVSPSLVPAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 QQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPSLATNASAAAFNPYLGPVSPSLVPAE
40 50 60 70 80 90
150 160 170 180 190 200
pF1KA0 ILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADS
100 110 120 130 140 150
210 220 230 240 250 260
pF1KA0 TMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAA
160 170 180 190 200 210
270 280 290 300 310
pF1KA0 M------------------GIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQ
: :::::::::::::::::::::::::::::::::::::::::
CCDS82 MTQSAVKSLKRPLEATFDLGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQ
220 230 240 250 260 270
320 330 340 350
pF1KA0 LQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATATANQIPIISA
:::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS82 LQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATATANQIPIISA
280 290 300 310 320 330
360 370
pF1KA0 EHLTSHKYVTQM
::::::::::::
CCDS82 EHLTSHKYVTQM
340
>>CCDS14633.1 MBNL3 gene_id:55796|Hs108|chrX (354 aa)
initn: 1265 init1: 583 opt: 1396 Z-score: 1198.3 bits: 230.3 E(32554): 2e-60
Smith-Waterman score: 1535; 63.6% identity (82.2% similar) in 365 aa overlap (2-353:3-352)
10 20 30 40 50
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKG
::.:. :::::::::::::::::::::: :..:::::: . :.::::::.::::::::
CCDS14 MTAVNVALIRDTKWLTLEVCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 RCSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMA-MLAQQMQLANAMMPGAPLQPVPMF
::.:::::::::::::::::::::::::::::. : :.:::::: :. .: .. . :
CCDS14 RCTRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQL---MLQNAQMSSLGSF
70 80 90 100 110
120 130 140 150 160 170
pF1KA0 SVAPSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMR
..::. .: : ::::. . .:::::..:..:.:. ::: . .:.:.. ::::
CCDS14 PMTPSIPANPPMA-FNPYIPHPGMGLVPAELVPNTPVLIPGNPPLAMPGAVGP---KLMR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA0 TDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFH
.:.::::::.:::::.:::::::.:::.:..::...:::::.::::::::::::::::::
CCDS14 SDKLEVCREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREKCKYFH
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 PPAHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTG
:::::::..:::..:.:..: :.::.. ..: .::: :::: :::: :::
CCDS14 PPAHLQARLKAAHHQMNHSA-------ASAMALQPGTLQLIPKRSALEKPNGATPVFNPT
240 250 260 270 280
300 310 320 330 340
pF1KA0 IFQYQQALANMQLQQHTAFLP--P----------VPMVHGATPATVSAATTSATSVPFAA
.:. ::::.:.:: : ::.: : :::.:::::.::::::: ::::::::
CCDS14 VFHCQQALTNLQLPQ-PAFIPAGPILCMAPASNIVPMMHGATPTTVSAATTPATSVPFAA
290 300 310 320 330 340
350 360 370
pF1KA0 TATANQIPIISAEHLTSHKYVTQM
.:.::.
CCDS14 PTTGNQLKF
350
370 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:54:10 2016 done: Wed Nov 2 18:54:11 2016
Total Scan time: 2.780 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]