Result of FASTA (omim) for
pF1KA0428
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0428, 370 aa
1>>>pF1KA0428 370 - 370 aa - 370 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9147+/-0.000373; mu= 11.3492+/- 0.023
mean_var=152.6760+/-30.917, 0's: 0 Z-trim(118.5): 90 B-trim: 986 in 1/59
Lambda= 0.103798
statistics sampled from 31502 (31605) to 31502 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.709), E-opt: 0.2 (0.371), width: 16
Scan time: 7.950
The best scores are: opt bits E(85289)
NP_997175 (OMIM: 606516) muscleblind-like protein ( 370) 2496 385.3 1.2e-106
XP_016861919 (OMIM: 606516) PREDICTED: muscleblind ( 370) 2496 385.3 1.2e-106
XP_016861920 (OMIM: 606516) PREDICTED: muscleblind ( 370) 2496 385.3 1.2e-106
NP_066368 (OMIM: 606516) muscleblind-like protein ( 382) 2216 343.4 5.2e-94
XP_016861918 (OMIM: 606516) PREDICTED: muscleblind ( 382) 2216 343.4 5.2e-94
XP_016861916 (OMIM: 606516) PREDICTED: muscleblind ( 382) 2216 343.4 5.2e-94
XP_016861917 (OMIM: 606516) PREDICTED: muscleblind ( 382) 2216 343.4 5.2e-94
XP_005247528 (OMIM: 606516) PREDICTED: muscleblind ( 342) 2197 340.5 3.5e-93
XP_016861925 (OMIM: 606516) PREDICTED: muscleblind ( 342) 2197 340.5 3.5e-93
NP_997180 (OMIM: 606516) muscleblind-like protein ( 342) 2197 340.5 3.5e-93
XP_016861926 (OMIM: 606516) PREDICTED: muscleblind ( 330) 2190 339.4 7e-93
XP_005247520 (OMIM: 606516) PREDICTED: muscleblind ( 401) 2091 324.7 2.3e-88
XP_016861923 (OMIM: 606516) PREDICTED: muscleblind ( 348) 1858 289.7 6.7e-78
XP_016861922 (OMIM: 606516) PREDICTED: muscleblind ( 348) 1858 289.7 6.7e-78
XP_016861921 (OMIM: 606516) PREDICTED: muscleblind ( 360) 1858 289.7 6.9e-78
XP_016861914 (OMIM: 606516) PREDICTED: muscleblind ( 388) 1858 289.8 7.3e-78
XP_005247523 (OMIM: 606516) PREDICTED: muscleblind ( 388) 1858 289.8 7.3e-78
XP_016861915 (OMIM: 606516) PREDICTED: muscleblind ( 388) 1858 289.8 7.3e-78
NP_997176 (OMIM: 606516) muscleblind-like protein ( 388) 1858 289.8 7.3e-78
XP_005247521 (OMIM: 606516) PREDICTED: muscleblind ( 400) 1858 289.8 7.4e-78
XP_016861913 (OMIM: 606516) PREDICTED: muscleblind ( 400) 1858 289.8 7.4e-78
XP_016861912 (OMIM: 606516) PREDICTED: muscleblind ( 400) 1858 289.8 7.4e-78
NP_997179 (OMIM: 606516) muscleblind-like protein ( 340) 1849 288.4 1.7e-77
XP_016861931 (OMIM: 606516) PREDICTED: muscleblind ( 278) 1839 286.8 4.1e-77
XP_016861930 (OMIM: 606516) PREDICTED: muscleblind ( 278) 1839 286.8 4.1e-77
XP_005254079 (OMIM: 607327) PREDICTED: muscleblind ( 355) 1814 283.1 6.6e-76
XP_005247519 (OMIM: 606516) PREDICTED: muscleblind ( 413) 1811 282.7 1e-75
XP_005247525 (OMIM: 606516) PREDICTED: muscleblind ( 361) 1785 278.8 1.4e-74
NP_659002 (OMIM: 607327) muscleblind-like protein ( 367) 1678 262.8 9.1e-70
XP_016875799 (OMIM: 607327) PREDICTED: muscleblind ( 367) 1678 262.8 9.1e-70
NP_001292999 (OMIM: 607327) muscleblind-like prote ( 373) 1654 259.2 1.1e-68
XP_016875798 (OMIM: 607327) PREDICTED: muscleblind ( 373) 1654 259.2 1.1e-68
NP_997187 (OMIM: 607327) muscleblind-like protein ( 361) 1647 258.1 2.2e-68
XP_016875800 (OMIM: 607327) PREDICTED: muscleblind ( 361) 1647 258.1 2.2e-68
XP_005247533 (OMIM: 606516) PREDICTED: muscleblind ( 290) 1559 244.9 1.8e-64
XP_016861928 (OMIM: 606516) PREDICTED: muscleblind ( 290) 1559 244.9 1.8e-64
XP_016861929 (OMIM: 606516) PREDICTED: muscleblind ( 290) 1559 244.9 1.8e-64
XP_016861932 (OMIM: 606516) PREDICTED: muscleblind ( 238) 1533 240.9 2.3e-63
XP_005254078 (OMIM: 607327) PREDICTED: muscleblind ( 373) 1466 231.0 3.3e-60
XP_005254076 (OMIM: 607327) PREDICTED: muscleblind ( 379) 1459 230.0 6.9e-60
XP_005254075 (OMIM: 607327) PREDICTED: muscleblind ( 385) 1454 229.3 1.2e-59
XP_016875797 (OMIM: 607327) PREDICTED: muscleblind ( 385) 1454 229.3 1.2e-59
XP_006719975 (OMIM: 607327) PREDICTED: muscleblind ( 391) 1454 229.3 1.2e-59
XP_011519347 (OMIM: 607327) PREDICTED: muscleblind ( 391) 1454 229.3 1.2e-59
XP_005247524 (OMIM: 606516) PREDICTED: muscleblind ( 379) 1453 229.1 1.3e-59
XP_005247522 (OMIM: 606516) PREDICTED: muscleblind ( 391) 1453 229.1 1.3e-59
XP_005247518 (OMIM: 606516) PREDICTED: muscleblind ( 419) 1453 229.1 1.4e-59
XP_006713702 (OMIM: 606516) PREDICTED: muscleblind ( 431) 1453 229.2 1.4e-59
XP_005247515 (OMIM: 606516) PREDICTED: muscleblind ( 431) 1453 229.2 1.4e-59
XP_005247517 (OMIM: 606516) PREDICTED: muscleblind ( 431) 1453 229.2 1.4e-59
>>NP_997175 (OMIM: 606516) muscleblind-like protein 1 is (370 aa)
initn: 2496 init1: 2496 opt: 2496 Z-score: 2035.5 bits: 385.3 E(85289): 1.2e-106
Smith-Waterman score: 2496; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
310 320 330 340 350 360
370
pF1KA0 LTSHKYVTQM
::::::::::
NP_997 LTSHKYVTQM
370
>>XP_016861919 (OMIM: 606516) PREDICTED: muscleblind-lik (370 aa)
initn: 2496 init1: 2496 opt: 2496 Z-score: 2035.5 bits: 385.3 E(85289): 1.2e-106
Smith-Waterman score: 2496; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
310 320 330 340 350 360
370
pF1KA0 LTSHKYVTQM
::::::::::
XP_016 LTSHKYVTQM
370
>>XP_016861920 (OMIM: 606516) PREDICTED: muscleblind-lik (370 aa)
initn: 2496 init1: 2496 opt: 2496 Z-score: 2035.5 bits: 385.3 E(85289): 1.2e-106
Smith-Waterman score: 2496; 100.0% identity (100.0% similar) in 370 aa overlap (1-370:1-370)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
310 320 330 340 350 360
370
pF1KA0 LTSHKYVTQM
::::::::::
XP_016 LTSHKYVTQM
370
>>NP_066368 (OMIM: 606516) muscleblind-like protein 1 is (382 aa)
initn: 2479 init1: 2200 opt: 2216 Z-score: 1808.7 bits: 343.4 E(85289): 5.2e-94
Smith-Waterman score: 2462; 96.9% identity (96.9% similar) in 382 aa overlap (1-370:1-382)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_066 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340
pF1KA0 QYQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATA
:::::::::::::::::::: ::::::::::::::::::::::::::::
NP_066 QYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATA
310 320 330 340 350 360
350 360 370
pF1KA0 TANQIPIISAEHLTSHKYVTQM
::::::::::::::::::::::
NP_066 TANQIPIISAEHLTSHKYVTQM
370 380
>>XP_016861918 (OMIM: 606516) PREDICTED: muscleblind-lik (382 aa)
initn: 2479 init1: 2200 opt: 2216 Z-score: 1808.7 bits: 343.4 E(85289): 5.2e-94
Smith-Waterman score: 2462; 96.9% identity (96.9% similar) in 382 aa overlap (1-370:1-382)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340
pF1KA0 QYQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATA
:::::::::::::::::::: ::::::::::::::::::::::::::::
XP_016 QYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATA
310 320 330 340 350 360
350 360 370
pF1KA0 TANQIPIISAEHLTSHKYVTQM
::::::::::::::::::::::
XP_016 TANQIPIISAEHLTSHKYVTQM
370 380
>>XP_016861916 (OMIM: 606516) PREDICTED: muscleblind-lik (382 aa)
initn: 2479 init1: 2200 opt: 2216 Z-score: 1808.7 bits: 343.4 E(85289): 5.2e-94
Smith-Waterman score: 2462; 96.9% identity (96.9% similar) in 382 aa overlap (1-370:1-382)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340
pF1KA0 QYQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATA
:::::::::::::::::::: ::::::::::::::::::::::::::::
XP_016 QYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATA
310 320 330 340 350 360
350 360 370
pF1KA0 TANQIPIISAEHLTSHKYVTQM
::::::::::::::::::::::
XP_016 TANQIPIISAEHLTSHKYVTQM
370 380
>>XP_016861917 (OMIM: 606516) PREDICTED: muscleblind-lik (382 aa)
initn: 2479 init1: 2200 opt: 2216 Z-score: 1808.7 bits: 343.4 E(85289): 5.2e-94
Smith-Waterman score: 2462; 96.9% identity (96.9% similar) in 382 aa overlap (1-370:1-382)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340
pF1KA0 QYQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATA
:::::::::::::::::::: ::::::::::::::::::::::::::::
XP_016 QYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATA
310 320 330 340 350 360
350 360 370
pF1KA0 TANQIPIISAEHLTSHKYVTQM
::::::::::::::::::::::
XP_016 TANQIPIISAEHLTSHKYVTQM
370 380
>>XP_005247528 (OMIM: 606516) PREDICTED: muscleblind-lik (342 aa)
initn: 2191 init1: 2191 opt: 2197 Z-score: 1794.0 bits: 340.5 E(85289): 3.5e-93
Smith-Waterman score: 2197; 97.9% identity (98.5% similar) in 331 aa overlap (1-331:1-330)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
:::::::::::::::::::: .. ::::
XP_005 QYQQALANMQLQQHTAFLPPGSILC-MTPATSVDTHNICRTSD
310 320 330 340
370
pF1KA0 LTSHKYVTQM
>>XP_016861925 (OMIM: 606516) PREDICTED: muscleblind-lik (342 aa)
initn: 2191 init1: 2191 opt: 2197 Z-score: 1794.0 bits: 340.5 E(85289): 3.5e-93
Smith-Waterman score: 2197; 97.9% identity (98.5% similar) in 331 aa overlap (1-331:1-330)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
:::::::::::::::::::: .. ::::
XP_016 QYQQALANMQLQQHTAFLPPGSILC-MTPATSVDTHNICRTSD
310 320 330 340
370
pF1KA0 LTSHKYVTQM
>>NP_997180 (OMIM: 606516) muscleblind-like protein 1 is (342 aa)
initn: 2191 init1: 2191 opt: 2197 Z-score: 1794.0 bits: 340.5 E(85289): 3.5e-93
Smith-Waterman score: 2197; 97.9% identity (98.5% similar) in 331 aa overlap (1-331:1-330)
10 20 30 40 50 60
pF1KA0 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
:::::::::::::::::::: .. ::::
NP_997 QYQQALANMQLQQHTAFLPPGSILC-MTPATSVDTHNICRTSD
310 320 330 340
370
pF1KA0 LTSHKYVTQM
370 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:54:11 2016 done: Wed Nov 2 18:54:12 2016
Total Scan time: 7.950 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]