Result of FASTA (ccds) for
pF1KA0437
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0437, 1596 aa
1>>>pF1KA0437 1596 - 1596 aa - 1596 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.7313+/-0.00126; mu= -6.6632+/- 0.077
mean_var=549.0486+/-110.921, 0's: 0 Z-trim(114.4): 23 B-trim: 49 in 1/53
Lambda= 0.054735
statistics sampled from 14993 (15005) to 14993 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.461), width: 16
Scan time: 5.500
The best scores are: opt bits E(32554)
CCDS11923.2 SETBP1 gene_id:26040|Hs108|chr18 (1596) 10681 859.8 0
CCDS1113.2 ASH1L gene_id:55870|Hs108|chr1 (2964) 1217 112.7 1.8e-23
CCDS45859.1 SETBP1 gene_id:26040|Hs108|chr18 ( 242) 1181 108.8 2.3e-23
>>CCDS11923.2 SETBP1 gene_id:26040|Hs108|chr18 (1596 aa)
initn: 10681 init1: 10681 opt: 10681 Z-score: 4577.1 bits: 859.8 E(32554): 0
Smith-Waterman score: 10681; 99.9% identity (100.0% similar) in 1596 aa overlap (1-1596:1-1596)
10 20 30 40 50 60
pF1KA0 MESRETLSSSRQRGGESDFLPVSSAKPPAAPGCAGEPLLSTPGPGKGIPVGGERMEPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MESRETLSSSRQRGGESDFLPVSSAKPPAAPGCAGEPLLSTPGPGKGIPVGGERMEPEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DELGSGRDVDSNSNADSEKWVAGDGLEEQEFSIKEANFTEGSLKLKIQTTKRAKKPPKNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DELGSGRDVDSNSNADSEKWVAGDGLEEQEFSIKEANFTEGSLKLKIQTTKRAKKPPKNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 ENYICPPEIKITIKQSGDQKVSRAGKNSKATKEEERSHSKKKLLTASDLAASDLKGFQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ENYICPPEIKITIKQSGDQKVSRAGKNSKATKEEERSHSKKKLLTASDLAASDLKGFQPQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 AYERPQKHSTLHYDTGLPQDFTGDTLKPKHQQKSSSQNHMDWSTNSDSGPVTQNCFISPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AYERPQKHSTLHYDTGLPQDFTGDTLKPKHQQKSSSQNHMDWSTNSDSGPVTQNCFISPE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SGRETASTSKIPALEPVASFAKAQGKKGSAGNTWSQLSNNNKDLLLGGVAPSPSSHSSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SGRETASTSKIPALEPVASFAKAQGKKGSAGNTWSQLSNNNKDLLLGGVAPSPSSHSSPA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 PPSSSAECNGLQPLVDQDGGGTKEPPEPPTVGSKKKSSKKDVISQTIPNPDLDWVKNAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PPSSSAECNGLQPLVDQDGGGTKEPPEPPTVGSKKKSSKKDVISQTIPNPDLDWVKNAQK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 AFDNTEGKREGYSADSAQEASPARQNVSSASNPENDSSHVRITIPIKAPSLDPTNHKRKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 AFDNTEGKREGYSADSAQEASPARQNVSSASNPENDSSHVRITIPIKAPSLDPTNHKRKK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 RQSIKAVVEKIMPEKALASGITMSSEVVNRILSNSEGNKKDPRVPKLSKMIENESPSVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RQSIKAVVEKIMPEKALASGITMSSEVVNRILSNSEGNKKDPRVPKLSKMIENESPSVGL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 ETGGNAEKVIPGGVSKPRKPPMVMTPPTCTDHSPSRKLPEIQHPKFAAKRRWTCSKPKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ETGGNAEKVIPGGVSKPRKPPMVMTPPTCTDHSPSRKLPEIQHPKFAAKRRWTCSKPKPS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 TMLREAVMATSDKLMLEPPSAYPITPSSPLYTNTDSLTVITPVKKKRGRPKKQPLLTVET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TMLREAVMATSDKLMLEPPSAYPITPSSPLYTNTDSLTVITPVKKKRGRPKKQPLLTVET
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 IHEGTSTSPVSPISREFPGTKKRKRRRNLAKLAQLVPGEDKPMSEMKFHKKVGKLGVLDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IHEGTSTSPVSPISREFPGTKKRKRRRNLAKLAQLVPGEDKPMSEMKFHKKVGKLGVLDK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 KTIKTINKMKTLKRKNILNQILSCSSSVALKAKAPPETSPGAAAIESKLGKQINVSKRGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KTIKTINKMKTLKRKNILNQILSCSSSVALKAKAPPETSPGAAAIESKLGKQINVSKRGT
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 IYIGKKRGRKPRAELPPPSEEPKTAIKHPRPVSSQPDVPAVPSNFQSLVASSPAAMHPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IYIGKKRGRKPRAELPPPSEEPKTAIKHPRPVSSQPDVPAVPSNFQSLVASSPAAMHPLS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 TQLGGSNGNLSPASTETNFSELKTMPNLQPISALPTKTQKGIHSGTWKLSPPRLMANSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TQLGGSNGNLSPASTETNFSELKTMPNLQPISALPTKTQKGIHSGTWKLSPPRLMANSPS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 HLCEIGSLKEITLSPVSESHSEETIPSDSGIGTDNNSTSDQAEKSSESRRRYSFDFCSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HLCEIGSLKEITLSPVSESHSEETIPSDSGIGTDNNSTSDQAEKSSESRRRYSFDFCSLD
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 NPEAIPSDTSTKNRHGHRQKHLIVDNFLAHESLKKPKHKRKRKSLQNRDDLQFLADLEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NPEAIPSDTSTKNRHGHRQKHLIVDNFLAHESLKKPKHKRKRKSLQNRDDLQFLADLEEL
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 ITKFQVFRISHRSYTFYHENPYPSIFRINFDHYYPVPYIQYDPLLYLRRTSDLKSKKKRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ITKFQVFRISHRSYTFYHENPYPSIFRINFDHYYPVPYIQYDPLLYLRRTSDLKSKKKRG
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 RPAKTNDTMTKVPFLQGFSYPIPSGSYYAPYGMPYTSMPMMNLGYYGQYPAPLYLSHTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RPAKTNDTMTKVPFLQGFSYPIPSGSYYAPYGMPYTSMPMMNLGYYGQYPAPLYLSHTLG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 AASPFMRPTVPPPQFHTNSHIKMSGAAKHKAKHGVHLQGPVSMGLGDMQPSLNPPKVGSA
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS11 AASPFMRPTVPPPQFHTNSHVKMSGAAKHKAKHGVHLQGPVSMGLGDMQPSLNPPKVGSA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 SLSSGRLHKRKHKHKHKHKEDRILGTHDNLSGLFAGKATGFSSHILSERLSSADKELPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SLSSGRLHKRKHKHKHKHKEDRILGTHDNLSGLFAGKATGFSSHILSERLSSADKELPLV
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 SEKNKHKEKQKHQHSEAGHKASKNNFEVDTLSTLSLSDAQHWTQAKEKGDLSSEPVDSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SEKNKHKEKQKHQHSEAGHKASKNNFEVDTLSTLSLSDAQHWTQAKEKGDLSSEPVDSCT
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 KRYSGSGGDGGSTRSENLDVFSEMNPSNDKWDSDVSGSKRRSYEGFGTYREKDIQAFKMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KRYSGSGGDGGSTRSENLDVFSEMNPSNDKWDSDVSGSKRRSYEGFGTYREKDIQAFKMN
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 RKERSSYDSSMSPGMPSPHLKVDQTAVHSKNEGSVPTMMTRKKPAAVDSVTIPPAPVLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RKERSSYDSSMSPGMPSPHLKVDQTAVHSKNEGSVPTMMTRKKPAAVDSVTIPPAPVLSL
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 LAASAATSDAVGSSLKKRFKRREIEAIQCEVRKMCNYTKILSTKKNLDHVNKILKAKRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LAASAATSDAVGSSLKKRFKRREIEAIQCEVRKMCNYTKILSTKKNLDHVNKILKAKRLQ
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 RQSKTGNNFVKKRRGRPRKQPTQFDEDSRDQMPVLEKCIDLPSKRGQKPSLSPLVLEPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RQSKTGNNFVKKRRGRPRKQPTQFDEDSRDQMPVLEKCIDLPSKRGQKPSLSPLVLEPAA
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 SQDTIMATIEAVIHMAREAPPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SQDTIMATIEAVIHMAREAPPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQAP
1510 1520 1530 1540 1550 1560
1570 1580 1590
pF1KA0 AQPPQQSPPQQPLPQEEEVKAKRQRKSRGSESEVLP
::::::::::::::::::::::::::::::::::::
CCDS11 AQPPQQSPPQQPLPQEEEVKAKRQRKSRGSESEVLP
1570 1580 1590
>>CCDS1113.2 ASH1L gene_id:55870|Hs108|chr1 (2964 aa)
initn: 1133 init1: 344 opt: 1217 Z-score: 534.8 bits: 112.7 E(32554): 1.8e-23
Smith-Waterman score: 1701; 30.9% identity (56.7% similar) in 1512 aa overlap (231-1572:501-1958)
210 220 230 240 250
pF1KA0 FTGDTLKPKHQQKSSSQNHMDWSTNSDSGPVTQNCFISPESGR-ETASTSKIPALEPVAS
. :. : : :.: ::.. : : . ..
CCDS11 RQNKESILEKFSVRKEIINLEKEMFNEGTCIQQDSFSSSEKGSYETSKHEKQPPVYCTSP
480 490 500 510 520 530
260 270 280 290 300 310
pF1KA0 FAKAQGKK--GSAGNTWSQLSNNNKDLLLGGVAPSPSSHSSP---APPSSSAECNGLQPL
: : . ..: . .: ....: .:::. .: .:: .:.. :
CCDS11 DFKMGGASDVSTAKSPFSAVGESNLP------SPSPTVSVNPLTRSPPETSSQLAPNPLL
540 550 560 570 580
320 330 340 350 360
pF1KA0 VDQDGGGTKEPPEPPTVGSKKKSSKKDVI---------SQTIPNPDLDWVKNAQKA----
... .: : .::... .:.. . : .: .: : .:.
CCDS11 LSSTTELIEEISE--SVGKNQFTSESTHLNVGHRSVGHSISIECKGIDKEVNDSKTTHID
590 600 610 620 630 640
370 380 390 400
pF1KA0 ---FDNTEGKREGYSADSA-QEASPARQNVSS--ASNP-------ENDSSHVRITIPIKA
.... ::. . ...:. . .:. : .: ...: ...: .. :
CCDS11 IPRISSSLGKKPSLTSESSIHTITPSVVNFTSLFSNKPFLKLGAVSASDKHCQV-----A
650 660 670 680 690
410 420 430 440 450
pF1KA0 PSLDPTNHKR--KKRQSIKAVVEKIMPEKALAS--GITMS-SEVVNRI----LSNSEG--
::. . ... :::.. : :.. ... : :. . ::. . . ::::..
CCDS11 ESLSTSLQSKPLKKRKGRKPRWTKVVARSTCRSPKGLELERSELFKNVSCSSLSNSNSEP
700 710 720 730 740 750
460 470 480 490 500
pF1KA0 -----NKKDP----------RVPKLSKMIENESPSVGLETGGNAEKVIPGGVSKPR-KPP
: : :.::::: . .::..: ...:: . . . .
CCDS11 AKFMKNIGPPSFVDHDFLKRRLPKLSK---STAPSLALL--ADSEKPSHKSFATHKLSSS
760 770 780 790 800 810
510 520 530 540 550
pF1KA0 MVMTPPTCTD-HSPSRKLPEIQH-PKFAAKRRWTCSKPKPSTMLREAVMATSDKLMLEPP
: .. .: ..:.: :. .. :.. . . : . : . :.. ..: :::
CCDS11 MCVSSDLLSDIYKPKRGRPKSKEMPQLEGPPKRTLKIPASK------VFSLQSKEEQEPP
820 830 840 850 860
560 570 580 590 600 610
pF1KA0 SAYPITPSSPLYTNTDSLTVITPVKKKRGRPKKQPLLTVETIHEGTSTSPV----SPISR
. : . . ..:.: .: :::::::.: :. :..: :: .
CCDS11 I---LQPEIEIPSFKQGLSV-SPFPKKRGRPKRQMRSPVKMKPPVLSVAPFVATESPSKL
870 880 890 900 910 920
620 630 640 650 660
pF1KA0 EFPGTKKRKRRRNLAKLAQLVPGED-----KP----MS--EMKFHKKVGKL--GVLDKKT
: . ..:. . . :: .: .: :: ::. ::. : : : :
CCDS11 ESESDNHRSSSDFFESEDQLQDPDDLDDSHRPSVCSMSDLEMEPDKKITKRNNGQLMKTI
930 940 950 960 970 980
670 680 690 700 710
pF1KA0 IKTINKMKTLKRKNILNQILSCSSSVALKAKAPPE----TSPGAAAIESKLGKQINVSKR
:. ::::::::::..:::::: : . :.:. . .: ::.. ::::.::::::.
CCDS11 IRKINKMKTLKRKKLLNQILSSSVESSNKGKVQSKLHNTVSSLAATFGSKLGQQINVSKK
990 1000 1010 1020 1030 1040
720 730 740 750 760 770
pF1KA0 GTIYIGKKRGRKPRAELPPPSEEPKTAIKHPRPVSSQPDVPAV----PSNFQSLVASSPA
:::::::.:::::.. : :.. . ...: :. : . : ..::
CCDS11 GTIYIGKRRGRKPKTVLNGILSGSPTSLAVLEQTAQQAAGSALGQILPPLLPSSASSSEI
1050 1060 1070 1080 1090 1100
780 790 800 810 820 830
pF1KA0 AMHPLSTQLGGSNGNLSPASTETNFSELKTMPNLQ----PISALPTKTQKGIHSGTWKLS
:. .: .:..:. ::.:....: : ...: :. : . : ..: .: .::
CCDS11 LPSPICSQSSGTSGGQSPVSSDAGFVEPSSVPYLHLHSRQGSMIQTLAMKKASKGRRRLS
1110 1120 1130 1140 1150 1160
840 850 860 870 880
pF1KA0 PPRLMANSPSHLCEIGSLKEITLSPVSESHSEETIPSDSGIGTDNNSTSDQAEK-SSESR
:: :. :::::: :. :::: : ::.:::::.::::::::::::::::::.::: ....
CCDS11 PPTLLPNSPSHLSELTSLKEATPSPISESHSDETIPSDSGIGTDNNSTSDRAEKFCGQKK
1170 1180 1190 1200 1210 1220
890 900 910 920 930 940
pF1KA0 RRYSFDFCSLDNPEAIPSDTSTKNRHGHRQKHLIVDNFLAHESLKKPKHKRKRK--SLQN
::.::. :: ::. .: :..: :. :. : .:.....:. :.:::.: .:.:
CCDS11 RRHSFEHVSLIPPETSTVLSSLKEKHKHKCKRRNHD-YLSYDKMKRQKRKRKKKYPQLRN
1230 1240 1250 1260 1270 1280
950 960 970 980 990 1000
pF1KA0 RDDLQFLADLEELITKFQVFRISHRSYTFYHENPYPSIFRINFDHYYPVPYIQYDPLLYL
:.: .:.:.:::::.... .::.:::. : .. :.::::::. .: : . ::: :.
CCDS11 RQDPDFIAELEELISRLSEIRITHRSHHFIPRDLLPTIFRINFNSFYTHPSFPLDPLHYI
1290 1300 1310 1320 1330 1340
1010 1020 1030 1040 1050 1060
pF1KA0 RRTSDLKSKKKRGRPAKTNDTMTKVPFLQGFSYPIPSGSYYAPYGMPYTSMPM----MNL
:. :: ::::::: : ..:...::....:.:. : ..: :::::. :. ..:
CCDS11 RKP-DL--KKKRGRPPKMREAMAEMPFMHSLSFPLSSTGFYPSYGMPYSPSPLTAAPIGL
1350 1360 1370 1380 1390
1070 1080 1090 1100 1110 1120
pF1KA0 GYYGQYPAPLYLSHTLGAASPFMRPTVPPPQFHTNSHIKMSGAAKHKAKHGVHLQGP-VS
::::.:: :: :: . .:::.. .:. .. : :: :: . : ..
CCDS11 GYYGRYPPTLYPP----PPSPSFTTPLPPPSYMHAGHLLLNPAKYHKKKHKLLRQEAFLT
1400 1410 1420 1430 1440 1450
1130 1140 1150 1160 1170
pF1KA0 MGLGDMQPSLNPPKVGSASLSSGRLHKRKHKHKHKHKEDRI-------LGTHDNLSGLFA
. . . :.: .. : . ..::.:.:::.: : . : .. : : .
CCDS11 TSRTPLLSMSTYPSV-PPEMAYGWMVEHKHRHRHKHREHRSSEQPQVSMDTGSSRSVLES
1460 1470 1480 1490 1500 1510
1180 1190 1200 1210 1220
pF1KA0 GKATGFSSHILSERLSSADKE-----LPLVSEKNK--HKEKQ--KHQHSEAGHKAS--KN
: :.. ..:: . .:. : .: ... ..:.: ... ::.. : ..
CCDS11 LKRYRFGKDAVGERYKHKEKHRCHMSCPHLSPSKSLINREEQWVHREPSESSPLALGLQT
1520 1530 1540 1550 1560 1570
1230 1240 1250 1260 1270
pF1KA0 NFEVD------TLSTLSLSDAQHWTQAKEKGDLSSEPVDSCTKRYSGSGGDGGSTRSENL
...: .:: ... .. ... :. .: . . :: : :. ...: . ...
CCDS11 PLQIDCSESSPSLSLGGFTPNSEPASSDEHTNLFTSAIGSC--RVSNPNSSGRKKLTDSP
1580 1590 1600 1610 1620 1630
1280 1290 1300 1310 1320
pF1KA0 DVFSEMN------------PSNDKWDSDVSGSKRRSYEGFGTYREKDIQAFKMNRKERSS
.:: .. :::.. . ..::. : . . : .. . .:: :::
CCDS11 GLFSAQDTSLNRLHRKESLPSNERAVQTLAGSQPTSDK--PSQRPSESTNCSPTRK-RSS
1640 1650 1660 1670 1680
1330 1340 1350 1360 1370
pF1KA0 YDSSMSP--GMPS--PHLKVD-QTAVHS------KNEGSVPTMMTRKKPAAVDSVTIPPA
.:. : :.:: :.: .. . .: : .:: . : : .. :.. ... ::.
CCDS11 SESTSSTVNGVPSRSPRLVASGDDSVDSLLQRMVQNEDQEP--MEKSIDAVIATASAPPS
1690 1700 1710 1720 1730 1740
1380 1390 1400 1410
pF1KA0 --PVLSL-----------LAASAATSDAVGSSLK------------KRFKRREIEAIQCE
: : : . :.:::. ..:.. ...:: .::.: .
CCDS11 SSPGRSHSKDRTLGKPDSLLVPAVTSDSCNNSISLLSEKLTSSCSPHHIKRSVVEAMQRQ
1750 1760 1770 1780 1790 1800
1420 1430 1440 1450 1460 1470
pF1KA0 VRKMCNYTKILSTKKNLDHVNKILKAKRLQRQSKTGNNFVKKRRGRPRKQPTQFDEDSRD
.:::::: :::.:::::::::::::::.::::..:::::::.: ::::: : : .
CCDS11 ARKMCNYDKILATKKNLDHVNKILKAKKLQRQARTGNNFVKRRPGRPRKCPLQ----AVV
1810 1820 1830 1840 1850 1860
1480 1490 1500 1510 1520 1530
pF1KA0 QMPVLEKCIDLPSKRGQKPSLSPLVLEPAASQDTIMATIEAVIHMAREAPPLPPPPPPPL
.: ... . . .. . : : : ::. .::::.. . :
CCDS11 SMQAFQAAQFVNPELNRDEEGAALHLSP----DTVTDVIEAVVQSVNLNPEHKKGLKRKG
1870 1880 1890 1900 1910
1540 1550 1560 1570 1580 1590
pF1KA0 PPPPPPPLPPPPPLPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEVKAKRQRKSRGS
:::. . . : .::.. : :: . :
CCDS11 WLLEEQTRKKQKPLPEEEEQENNKSFNEAPVEIP--SPSETPAKPSEPESTLQPVLSLIP
1920 1930 1940 1950 1960 1970
pF1KA0 ESEVLP
CCDS11 REKKPPRPPKKKYQKAGLYSDVYKTTDPKSRLIQLKKEKLEYTPGEHEYGLFPAPIHVGK
1980 1990 2000 2010 2020 2030
>>CCDS45859.1 SETBP1 gene_id:26040|Hs108|chr18 (242 aa)
initn: 1181 init1: 1181 opt: 1181 Z-score: 533.1 bits: 108.8 E(32554): 2.3e-23
Smith-Waterman score: 1181; 100.0% identity (100.0% similar) in 180 aa overlap (1-180:1-180)
10 20 30 40 50 60
pF1KA0 MESRETLSSSRQRGGESDFLPVSSAKPPAAPGCAGEPLLSTPGPGKGIPVGGERMEPEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MESRETLSSSRQRGGESDFLPVSSAKPPAAPGCAGEPLLSTPGPGKGIPVGGERMEPEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 DELGSGRDVDSNSNADSEKWVAGDGLEEQEFSIKEANFTEGSLKLKIQTTKRAKKPPKNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DELGSGRDVDSNSNADSEKWVAGDGLEEQEFSIKEANFTEGSLKLKIQTTKRAKKPPKNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 ENYICPPEIKITIKQSGDQKVSRAGKNSKATKEEERSHSKKKLLTASDLAASDLKGFQPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ENYICPPEIKITIKQSGDQKVSRAGKNSKATKEEERSHSKKKLLTASDLAASDLKGFQPQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 AYERPQKHSTLHYDTGLPQDFTGDTLKPKHQQKSSSQNHMDWSTNSDSGPVTQNCFISPE
CCDS45 IKDSSKEEVWKRRGGQGIPFKKQFLSQERAMCFSCPRNPFPAKPGSLTLPFHSEPAVWAQ
190 200 210 220 230 240
1596 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:55:38 2016 done: Wed Nov 2 18:55:39 2016
Total Scan time: 5.500 Total Display time: 0.180
Function used was FASTA [36.3.4 Apr, 2011]