Result of FASTA (ccds) for
pF1KA0472
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0472, 929 aa
1>>>pF1KA0472 929 - 929 aa - 929 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.4842+/-0.00144; mu= 0.4316+/- 0.081
mean_var=393.6622+/-93.956, 0's: 0 Z-trim(107.9): 411 B-trim: 118 in 1/50
Lambda= 0.064642
statistics sampled from 9286 (9854) to 9286 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.303), width: 16
Scan time: 4.070
The best scores are: opt bits E(32554)
CCDS1451.1 DSTYK gene_id:25778|Hs108|chr1 ( 929) 6241 598.2 2.3e-170
CCDS1452.1 DSTYK gene_id:25778|Hs108|chr1 ( 884) 5476 526.8 6.8e-149
>>CCDS1451.1 DSTYK gene_id:25778|Hs108|chr1 (929 aa)
initn: 6241 init1: 6241 opt: 6241 Z-score: 3172.0 bits: 598.2 E(32554): 2.3e-170
Smith-Waterman score: 6241; 99.9% identity (99.9% similar) in 929 aa overlap (1-929:1-929)
10 20 30 40 50 60
pF1KA0 MEGDGVPWGSEPVSGPGPGGGGMIRELCRGFGRYRRYLGRLRQNLRETQKFFRDIKCSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MEGDGVPWGSEPVSGPGPGGGGMIRELCRGFGRYRRYLGRLRQNLRETQKFFRDIKCSHN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 HTCLSSLTGGGGAERGPAGDVAETGLQAGQLSCISFPPKEEKYLQQIVDCLPCILILGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HTCLSSLTGGGGAERGPAGDVAETGLQAGQLSCISFPPKEEKYLQQIVDCLPCILILGQD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 CNVKCQLLNLLLGVQVLPTTKLGSEESCKLRRLRFTYGTQTRVSLALPGQYELVHTLVAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 CNVKCQLLNLLLGVQVLPTTKLGSEESCKLRRLRFTYGTQTRVSLALPGQYELVHTLVAH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 QGNWETIPEEDLEVQENNEDAAHVLAELEVTMHHALLQEVDVVVAPCQGLRPTVDVLGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QGNWETIPEEDLEVQENNEDAAHVLAELEVTMHHALLQEVDVVVAPCQGLRPTVDVLGDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VNDFLPVITYALHKDELSERDEQELQEIRKYFSFPVFFFKVPKLGSEIIDSSTRRMESER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VNDFLPVITYALHKDELSERDEQELQEIRKYFSFPVFFFKVPKLGSEIIDSSTRRMESER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 SPLYRQLIDLGYLSSSHWNCGAPGQDTKAQSMLVEQSEKLRHLSTFSHQVLQTRLVDAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SPLYRQLIDLGYLSSSHWNCGAPGQDTKAQSMLVEQSEKLRHLSTFSHQVLQTRLVDAAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 ALNLVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ALNLVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 VETLNTMKEELLDDATNMEFKDVIVPENGEPVGTREIKCCIRQIQELIISRLNQAVANKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VETLNTMKEELLDDATNMEFKDVIVPENGEPVGTREIKCCIRQIQELIISRLNQAVANKL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 ISSVDYLRESFVGTLERCLQSLEKSQDVSVHITSNYLKQILNAAYHVEVTFHSGSSVTRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ISSVDYLRESFVGTLERCLQSLEKSQDVSVHITSNYLKQILNAAYHVEVTFHSGSSVTRM
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LWEQIKQIIQRITWVSPPAITLEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LWEQIKQIIQRITWVSPPAITLEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAF
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 AASLRQLEAGHSGRLEKTEDLWLRVRKDHAPRLARLSLESRSLQDVLLHRKPKLGQELGR
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS14 AASLRQLEAGHSGRLEKTEDLWLRVRKDHAPRLARLSLESCSLQDVLLHRKPKLGQELGR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 GQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDY
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 NYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 KNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWY
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 ICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRPLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRPLLG
850 860 870 880 890 900
910 920
pF1KA0 IVQPMLQGIMNRLCKSNSEQPNRGLDDST
:::::::::::::::::::::::::::::
CCDS14 IVQPMLQGIMNRLCKSNSEQPNRGLDDST
910 920
>>CCDS1452.1 DSTYK gene_id:25778|Hs108|chr1 (884 aa)
initn: 5476 init1: 5476 opt: 5476 Z-score: 2786.6 bits: 526.8 E(32554): 6.8e-149
Smith-Waterman score: 5817; 95.0% identity (95.0% similar) in 929 aa overlap (1-929:1-884)
10 20 30 40 50 60
pF1KA0 MEGDGVPWGSEPVSGPGPGGGGMIRELCRGFGRYRRYLGRLRQNLRETQKFFRDIKCSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MEGDGVPWGSEPVSGPGPGGGGMIRELCRGFGRYRRYLGRLRQNLRETQKFFRDIKCSHN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 HTCLSSLTGGGGAERGPAGDVAETGLQAGQLSCISFPPKEEKYLQQIVDCLPCILILGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HTCLSSLTGGGGAERGPAGDVAETGLQAGQLSCISFPPKEEKYLQQIVDCLPCILILGQD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 CNVKCQLLNLLLGVQVLPTTKLGSEESCKLRRLRFTYGTQTRVSLALPGQYELVHTLVAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 CNVKCQLLNLLLGVQVLPTTKLGSEESCKLRRLRFTYGTQTRVSLALPGQYELVHTLVAH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 QGNWETIPEEDLEVQENNEDAAHVLAELEVTMHHALLQEVDVVVAPCQGLRPTVDVLGDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QGNWETIPEEDLEVQENNEDAAHVLAELEVTMHHALLQEVDVVVAPCQGLRPTVDVLGDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VNDFLPVITYALHKDELSERDEQELQEIRKYFSFPVFFFKVPKLGSEIIDSSTRRMESER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VNDFLPVITYALHKDELSERDEQELQEIRKYFSFPVFFFKVPKLGSEIIDSSTRRMESER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 SPLYRQLIDLGYLSSSHWNCGAPGQDTKAQSMLVEQSEKLRHLSTFSHQVLQTRLVDAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SPLYRQLIDLGYLSSSHWNCGAPGQDTKAQSMLVEQSEKLRHLSTFSHQVLQTRLVDAAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 ALNLVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ALNLVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 VETLNTMKEELLDDATNMEFKDVIVPENGEPVGTREIKCCIRQIQELIISRLNQAVANKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VETLNTMKEELLDDATNMEFKDVIVPENGEPVGTREIKCCIRQIQELIISRLNQAVANKL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 ISSVDYLRESFVGTLERCLQSLEKSQDVSVHITSNYLKQILNAAYHVEVTFHSGSSVTRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ISSVDYLRESFVGTLERCLQSLEKSQDVSVHITSNYLKQILNAAYHVEVTFHSGSSVTRM
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LWEQIKQIIQRITWVSPPAITLEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LWEQIKQIIQRITWVSPPAITLEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAF
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 AASLRQLEAGHSGRLEKTEDLWLRVRKDHAPRLARLSLESRSLQDVLLHRKPKLGQELGR
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS14 AASLRQLEAGHSGRLEKTEDLWLRVRKDHAPRLARLSLESCSLQDVLLHRKPKLGQELGR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 GQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDY
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 NYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 KNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWY
:::::::::::::::::::::::::::::::::::::::::::
CCDS14 KNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTG-----------------
790 800 810 820
850 860 870 880 890 900
pF1KA0 ICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRPLLG
::::::::::::::::::::::::::::::::
CCDS14 ----------------------------ARPERLPVFDEECWQLMEACWDGDPLKRPLLG
830 840 850
910 920
pF1KA0 IVQPMLQGIMNRLCKSNSEQPNRGLDDST
:::::::::::::::::::::::::::::
CCDS14 IVQPMLQGIMNRLCKSNSEQPNRGLDDST
860 870 880
929 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 19:02:37 2016 done: Wed Nov 2 19:02:37 2016
Total Scan time: 4.070 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]