FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA0487, 180 aa 1>>>pF1KA0487 180 - 180 aa - 180 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9861+/-0.000608; mu= 14.9219+/- 0.037 mean_var=64.0016+/-12.751, 0's: 0 Z-trim(111.4): 16 B-trim: 0 in 0/55 Lambda= 0.160317 statistics sampled from 12330 (12345) to 12330 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.379), width: 16 Scan time: 2.090 The best scores are: opt bits E(32554) CCDS44952.1 NUDT4 gene_id:11163|Hs108|chr12 ( 180) 1217 289.3 8.9e-79 CCDS9044.1 NUDT4 gene_id:11163|Hs108|chr12 ( 181) 1205 286.5 6.1e-78 CCDS43952.1 NUDT11 gene_id:55190|Hs108|chrX ( 164) 1005 240.2 4.8e-64 CCDS35278.1 NUDT10 gene_id:170685|Hs108|chrX ( 164) 995 237.9 2.4e-63 CCDS76584.1 NUDT4 gene_id:11163|Hs108|chr12 ( 128) 850 204.3 2.4e-53 CCDS4791.1 NUDT3 gene_id:11165|Hs108|chr6 ( 172) 845 203.2 6.8e-53 CCDS73504.1 NUDT4 gene_id:11163|Hs108|chr12 ( 129) 838 201.5 1.7e-52 >>CCDS44952.1 NUDT4 gene_id:11163|Hs108|chr12 (180 aa) initn: 1217 init1: 1217 opt: 1217 Z-score: 1527.8 bits: 289.3 E(32554): 8.9e-79 Smith-Waterman score: 1217; 100.0% identity (100.0% similar) in 180 aa overlap (1-180:1-180) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR 130 140 150 160 170 180 >>CCDS9044.1 NUDT4 gene_id:11163|Hs108|chr12 (181 aa) initn: 654 init1: 637 opt: 1205 Z-score: 1512.7 bits: 286.5 E(32554): 6.1e-78 Smith-Waterman score: 1205; 99.4% identity (99.4% similar) in 181 aa overlap (1-180:1-181) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG 10 20 30 40 50 60 70 80 90 100 110 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: CCDS90 GAAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW 70 80 90 100 110 120 120 130 140 150 160 170 pF1KA0 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV 130 140 150 160 170 180 180 pF1KA0 R : CCDS90 R >>CCDS43952.1 NUDT11 gene_id:55190|Hs108|chrX (164 aa) initn: 1023 init1: 543 opt: 1005 Z-score: 1263.4 bits: 240.2 E(32554): 4.8e-64 Smith-Waterman score: 1005; 90.8% identity (96.3% similar) in 163 aa overlap (2-163:1-163) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :: ::::::::: :::::::::::::::.::::::::::::::.::::::::::::::: CCDS43 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG 10 20 30 40 50 70 80 90 100 110 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW ::::::::::::::::::::::.:: :::::::::::::::::.::::::::.::::::: CCDS43 GAAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREW 60 70 80 90 100 110 120 130 140 150 160 170 pF1KA0 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV ::::::::::::::::::::::::::: ::.:::: .:: ::.. CCDS43 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 120 130 140 150 160 180 pF1KA0 R >>CCDS35278.1 NUDT10 gene_id:170685|Hs108|chrX (164 aa) initn: 995 init1: 542 opt: 995 Z-score: 1250.9 bits: 237.9 E(32554): 2.4e-63 Smith-Waterman score: 995; 90.2% identity (95.7% similar) in 163 aa overlap (2-163:1-163) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :: ::::::::: :::::::::::::::.::::::::::::::.::::::::::::::: CCDS35 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG 10 20 30 40 50 70 80 90 100 110 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW ::::::::::::::::::::::.:: ::: :::::::::::::.::::::::.::::::: CCDS35 GAAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREW 60 70 80 90 100 110 120 130 140 150 160 170 pF1KA0 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV ::::::::::::::::::::::::::: ::.:::: .:: ::.. CCDS35 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP 120 130 140 150 160 180 pF1KA0 R >>CCDS76584.1 NUDT4 gene_id:11163|Hs108|chr12 (128 aa) initn: 850 init1: 850 opt: 850 Z-score: 1071.2 bits: 204.3 E(32554): 2.4e-53 Smith-Waterman score: 850; 100.0% identity (100.0% similar) in 128 aa overlap (53-180:1-128) 30 40 50 60 70 80 pF1KA0 CLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLG :::::::::::::::::::::::::::::: CCDS76 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG 10 20 30 90 100 110 120 130 140 pF1KA0 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 IFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEK 40 50 60 70 80 90 150 160 170 180 pF1KA0 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :::::::::::::::::::::::::::::::::::::: CCDS76 LKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR 100 110 120 >>CCDS4791.1 NUDT3 gene_id:11165|Hs108|chr6 (172 aa) initn: 845 init1: 845 opt: 845 Z-score: 1063.1 bits: 203.2 E(32554): 6.8e-53 Smith-Waterman score: 845; 79.1% identity (90.5% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KA0 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG :::.: ::::::: .:.::::::::::::.:.:::::::::.::.::::::::::::::. CCDS47 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 GAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWF :::::: ::::::: ::::.::::::.:::::::::: :::.::::::::::::::::: CCDS47 VAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 KVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR :.:::::::: ::::.: :.: :. : : ::. .: . CCDS47 KIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR 130 140 150 160 170 >>CCDS73504.1 NUDT4 gene_id:11163|Hs108|chr12 (129 aa) initn: 649 init1: 637 opt: 838 Z-score: 1056.1 bits: 201.5 E(32554): 1.7e-52 Smith-Waterman score: 838; 99.2% identity (99.2% similar) in 129 aa overlap (53-180:1-129) 30 40 50 60 70 80 pF1KA0 CLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLG :::::::::::::::::::::::::::::: CCDS73 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG 10 20 30 90 100 110 120 130 140 pF1KA0 IFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLE ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 IFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLE 40 50 60 70 80 90 150 160 170 180 pF1KA0 KLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR ::::::::::::::::::::::::::::::::::::::: CCDS73 KLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR 100 110 120 180 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 19:42:52 2016 done: Thu Nov 3 19:42:52 2016 Total Scan time: 2.090 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]