Result of FASTA (ccds) for
pF1KA0530
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0530, 2264 aa
1>>>pF1KA0530 2264 - 2264 aa - 2264 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.2039+/-0.00154; mu= 3.1089+/- 0.089
mean_var=492.9013+/-131.068, 0's: 0 Z-trim(106.8): 244 B-trim: 939 in 2/51
Lambda= 0.057769
statistics sampled from 8986 (9206) to 8986 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.283), width: 16
Scan time: 7.960
The best scores are: opt bits E(32554)
CCDS47457.1 ZNF292 gene_id:23036|Hs108|chr6 (2723) 14939 1263.3 0
>>CCDS47457.1 ZNF292 gene_id:23036|Hs108|chr6 (2723 aa)
initn: 14939 init1: 14939 opt: 14939 Z-score: 6751.0 bits: 1263.3 E(32554): 0
Smith-Waterman score: 14939; 99.9% identity (100.0% similar) in 2264 aa overlap (1-2264:460-2723)
10 20 30
pF1KA0 MGEEASIVSSIDELNDSEVYEKVVDYQEES
::::::::::::::::::::::::::::::
CCDS47 CELLLVLKTQWPFDPEFWDWKTLKRQCLALMGEEASIVSSIDELNDSEVYEKVVDYQEES
430 440 450 460 470 480
40 50 60 70 80 90
pF1KA0 KETSMNGLSGGVGANSGLLKDIGDEKQKKREIKQLRERGFISARFRNWQAYMQYCVLCDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KETSMNGLSGGVGANSGLLKDIGDEKQKKREIKQLRERGFISARFRNWQAYMQYCVLCDK
490 500 510 520 530 540
100 110 120 130 140 150
pF1KA0 EFLGHRIVRHAQKHYKDGIYSCPICAKNFNSKETFVPHVTLHVKQSSKERLAAMKPLRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EFLGHRIVRHAQKHYKDGIYSCPICAKNFNSKETFVPHVTLHVKQSSKERLAAMKPLRRL
550 560 570 580 590 600
160 170 180 190 200 210
pF1KA0 GRPPKITTTNENQKTNTVAKQEQRPIKKNSLYSTDFIVFNDNDGSDDENDDKDKSYEPEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GRPPKITTTNENQKTNTVAKQEQRPIKKNSLYSTDFIVFNDNDGSDDENDDKDKSYEPEV
610 620 630 640 650 660
220 230 240 250 260 270
pF1KA0 IPVQKPVPVNEFNCPVTFCKKGFKYFKNLIAHVKGHKDNEDAKRFLEMQSKKVICQYCRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IPVQKPVPVNEFNCPVTFCKKGFKYFKNLIAHVKGHKDNEDAKRFLEMQSKKVICQYCRR
670 680 690 700 710 720
280 290 300 310 320 330
pF1KA0 HFVSVTHLNDHLQMHCGSKPYICIQMKCKAGFNSYAELLTHRKEHQVFRAKCMFPKCGRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HFVSVTHLNDHLQMHCGSKPYICIQMKCKAGFNSYAELLTHRKEHQVFRAKCMFPKCGRI
730 740 750 760 770 780
340 350 360 370 380 390
pF1KA0 FSEAYLLYDHEAQHYNTYTCKFTGCGKVYRSQGELEKHLDDHSTPPEKVLPPEAQLNSSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FSEAYLLYDHEAQHYNTYTCKFTGCGKVYRSQGELEKHLDDHSTPPEKVLPPEAQLNSSG
790 800 810 820 830 840
400 410 420 430 440 450
pF1KA0 DSIQPSEVNQNTAENIEKERSMLPSENNIENSLLADRSDAWDKSKAESAVTKQDQISASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DSIQPSEVNQNTAENIEKERSMLPSENNIENSLLADRSDAWDKSKAESAVTKQDQISASE
850 860 870 880 890 900
460 470 480 490 500 510
pF1KA0 LRQANGPLSNGLENPATTPLLQSSEVAVSIKVSLNQGIEDNFGKQENSTVEGSGEALVTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LRQANGPLSNGLENPATTPLLQSSEVAVSIKVSLNQGIEDNFGKQENSTVEGSGEALVTD
910 920 930 940 950 960
520 530 540 550 560 570
pF1KA0 LHTPVEDTCNDLCHPGFQERKEQDCFNDAHVTQNSLVNSETLKIGDLTPQNLERQVNNLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LHTPVEDTCNDLCHPGFQERKEQDCFNDAHVTQNSLVNSETLKIGDLTPQNLERQVNNLM
970 980 990 1000 1010 1020
580 590 600 610 620 630
pF1KA0 TFSVQNQAAFQNNLPTSKFECGDNVKTSSNLYNLPLKTLESIAFVPPQSDLSNSLGTPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TFSVQNQAAFQNNLPTSKFECGDNVKTSSNLYNLPLKTLESIAFVPPQSDLSNSLGTPSV
1030 1040 1050 1060 1070 1080
640 650 660 670 680 690
pF1KA0 PPKAPVQKFSCQVEGCTRTYNSSQSIGKHMKTAHPDQYAAFKMQRKSKKGQKANNLNTPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PPKAPVQKFSCQVEGCTRTYNSSQSIGKHMKTAHPDQYAAFKMQRKSKKGQKANNLNTPN
1090 1100 1110 1120 1130 1140
700 710 720 730 740 750
pF1KA0 NGKFVYFLPSPVNSSNPFFTSQTKANGNPACSAQLQHVSPPIFPAHLASVSTPLLSSMES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NGKFVYFLPSPVNSSNPFFTSQTKANGNPACSAQLQHVSPPIFPAHLASVSTPLLSSMES
1150 1160 1170 1180 1190 1200
760 770 780 790 800 810
pF1KA0 VINPNITSQDKNEQGGMLCSQMENLPSTALPAQMEDLTKTVLPLNIDSGSDPFLPLPAES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VINPNITSQDKNEQGGMLCSQMENLPSTALPAQMEDLTKTVLPLNIDSGSDPFLPLPAES
1210 1220 1230 1240 1250 1260
820 830 840 850 860 870
pF1KA0 SSMSLFPSPADSGTNSVFSQLENNTNHYSSQIEGNTNSSFLKGGNGENAVFPSQVNVANN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SSMSLFPSPADSGTNSVFSQLENNTNHYSSQIEGNTNSSFLKGGNGENAVFPSQVNVANN
1270 1280 1290 1300 1310 1320
880 890 900 910 920 930
pF1KA0 FSSTNAQQSAPEKVKKDRGRGPNGKERKPKHNKRAKWPAIIRDGKFICSRCYRAFTNPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FSSTNAQQSAPEKVKKDRGRGPNGKERKPKHNKRAKWPAIIRDGKFICSRCYRAFTNPRS
1330 1340 1350 1360 1370 1380
940 950 960 970 980 990
pF1KA0 LGGHLSKRSYCKPLDGAEIAQELLQSNGQPSLLASMILSTNAVNLQQPQQSTFNPEACFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LGGHLSKRSYCKPLDGAEIAQELLQSNGQPSLLASMILSTNAVNLQQPQQSTFNPEACFK
1390 1400 1410 1420 1430 1440
1000 1010 1020 1030 1040 1050
pF1KA0 DPSFLQLLAENRSPAFLPNTFPRSGVTNFNTSVSQEGSEIIKQALETAGIPSTFEGAEML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DPSFLQLLAENRSPAFLPNTFPRSGVTNFNTSVSQEGSEIIKQALETAGIPSTFEGAEML
1450 1460 1470 1480 1490 1500
1060 1070 1080 1090 1100 1110
pF1KA0 SHVSTGCVSDASQVNATVMPNPTVPPLLHTVCHPNTLLTNQNRTSNSKTSSIEECSSLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SHVSTGCVSDASQVNATVMPNPTVPPLLHTVCHPNTLLTNQNRTSNSKTSSIEECSSLPV
1510 1520 1530 1540 1550 1560
1120 1130 1140 1150 1160 1170
pF1KA0 FPTNDLLLKTVENGLCSSSFPNSGGPSQNFTSNSSRVSVISGPQNTRSSHLNKKGNSASK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FPTNDLLLKTVENGLCSSSFPNSGGPSQNFTSNSSRVSVISGPQNTRSSHLNKKGNSASK
1570 1580 1590 1600 1610 1620
1180 1190 1200 1210 1220 1230
pF1KA0 RRKKVAPPLIAPNASQNLVTSDLTTMGLIAKSVEIPTTNLHSNVIPTCEPQSLVENLTQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RRKKVAPPLIAPNASQNLVTSDLTTMGLIAKSVEIPTTNLHSNVIPTCEPQSLVENLTQK
1630 1640 1650 1660 1670 1680
1240 1250 1260 1270 1280 1290
pF1KA0 LNNVNNQLFMTDVKENFKTSLESHTVLAPLTLKTENGDSQMMALNSCTTSVNSDLQISED
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS47 LNNVNNQLFMTDVKENFKTSLESHTVLAPLTLKTENGDSQMMALNSCTTSINSDLQISED
1690 1700 1710 1720 1730 1740
1300 1310 1320 1330 1340 1350
pF1KA0 NVIQNFEKTLEIIKTAMNSQILEVKSGSQGAGETSQNAQINYNIQLPSVNTVQNNKLPDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NVIQNFEKTLEIIKTAMNSQILEVKSGSQGAGETSQNAQINYNIQLPSVNTVQNNKLPDS
1750 1760 1770 1780 1790 1800
1360 1370 1380 1390 1400 1410
pF1KA0 SPFSSFISVMPTKSNIPQSEVSHKEDQIQEILEGLQKLKLENDLSTPASQCVLINTSVTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SPFSSFISVMPTKSNIPQSEVSHKEDQIQEILEGLQKLKLENDLSTPASQCVLINTSVTL
1810 1820 1830 1840 1850 1860
1420 1430 1440 1450 1460 1470
pF1KA0 TPTPVKSTADITVIQPVSEMINIQFNDKVNKPFVCQNQGCNYSAMTKDALFKHYGKIHQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TPTPVKSTADITVIQPVSEMINIQFNDKVNKPFVCQNQGCNYSAMTKDALFKHYGKIHQY
1870 1880 1890 1900 1910 1920
1480 1490 1500 1510 1520 1530
pF1KA0 TPEMILEIKKNQLKFAPFKCVVPTCTKTFTRNSNLRAHCQLVHHFTTEEMVKLKIKRPYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TPEMILEIKKNQLKFAPFKCVVPTCTKTFTRNSNLRAHCQLVHHFTTEEMVKLKIKRPYG
1930 1940 1950 1960 1970 1980
1540 1550 1560 1570 1580 1590
pF1KA0 RKSQSENVPASRSTQVKKQLAMTEENKKESQPALELRAETQNTHSNVAVIPEKQLIEKKS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
CCDS47 RKSQSENVPASRSTQVKKQLAMTEENKKESQPALELRAETQNTHSNVAVIPEKQLVEKKS
1990 2000 2010 2020 2030 2040
1600 1610 1620 1630 1640 1650
pF1KA0 PDKTESSLQVITVTSEQCNTNALTNTQTKGRKIRRHKKEKEEKKRKKPVSQSLEFPTRYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PDKTESSLQVITVTSEQCNTNALTNTQTKGRKIRRHKKEKEEKKRKKPVSQSLEFPTRYS
2050 2060 2070 2080 2090 2100
1660 1670 1680 1690 1700 1710
pF1KA0 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEEESEAGKESEETETKQTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEEESEAGKESEETETKQTL
2110 2120 2130 2140 2150 2160
1720 1730 1740 1750 1760 1770
pF1KA0 KEFRCQVSDCSRIFQAITGLIQHYMKLHEMTPEEIESMTASVDVGKFPCDQLECKSSFTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KEFRCQVSDCSRIFQAITGLIQHYMKLHEMTPEEIESMTASVDVGKFPCDQLECKSSFTT
2170 2180 2190 2200 2210 2220
1780 1790 1800 1810 1820 1830
pF1KA0 YLNYVVHLEADHGIGLRASKTEEDGVYKCDCEGCDRIYATRSNLLRHIFNKHNDKHKAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YLNYVVHLEADHGIGLRASKTEEDGVYKCDCEGCDRIYATRSNLLRHIFNKHNDKHKAHL
2230 2240 2250 2260 2270 2280
1840 1850 1860 1870 1880 1890
pF1KA0 IRPRRLTPGQENMSSKANQEKSKSKHRGTKHSRCGKEGIKMPKTKRKKKNNLENKNAKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IRPRRLTPGQENMSSKANQEKSKSKHRGTKHSRCGKEGIKMPKTKRKKKNNLENKNAKIV
2290 2300 2310 2320 2330 2340
1900 1910 1920 1930 1940 1950
pF1KA0 QIEENKPYSLKRGKHVYSIKARNDALSECTSRFVTQYPCMIKGCTSVVTSESNIIRHYKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QIEENKPYSLKRGKHVYSIKARNDALSECTSRFVTQYPCMIKGCTSVVTSESNIIRHYKC
2350 2360 2370 2380 2390 2400
1960 1970 1980 1990 2000 2010
pF1KA0 HKLSKAFTSQHRNLLIVFKRCCNSQVKETSEQEGAKNDVKDSDTCVSESNDNSRTTATVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 HKLSKAFTSQHRNLLIVFKRCCNSQVKETSEQEGAKNDVKDSDTCVSESNDNSRTTATVS
2410 2420 2430 2440 2450 2460
2020 2030 2040 2050 2060 2070
pF1KA0 QKEVEKNEKDEMDELTELFITKLINEDSTSVETQANTSSNVSNDFQEDNLCQSERQKASN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QKEVEKNEKDEMDELTELFITKLINEDSTSVETQANTSSNVSNDFQEDNLCQSERQKASN
2470 2480 2490 2500 2510 2520
2080 2090 2100 2110 2120 2130
pF1KA0 LKRVNKEKNVSQNKKRKVEKAEPASAAELSSVRKEEETAVAIQTIEEHPASFDWSSFKPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LKRVNKEKNVSQNKKRKVEKAEPASAAELSSVRKEEETAVAIQTIEEHPASFDWSSFKPM
2530 2540 2550 2560 2570 2580
2140 2150 2160 2170 2180 2190
pF1KA0 GFEVSFLKFLEESAVKQKKNTDKDHPNTGNKKGSHSNSRKNIDKTAVTSGNHVCPCKESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GFEVSFLKFLEESAVKQKKNTDKDHPNTGNKKGSHSNSRKNIDKTAVTSGNHVCPCKESE
2590 2600 2610 2620 2630 2640
2200 2210 2220 2230 2240 2250
pF1KA0 TFVQFANPSQLQCSDNVKIVLDKNLKDCTELVLKQLQEMKPTVSLKKLEVHSNDPDMSVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TFVQFANPSQLQCSDNVKIVLDKNLKDCTELVLKQLQEMKPTVSLKKLEVHSNDPDMSVM
2650 2660 2670 2680 2690 2700
2260
pF1KA0 KDISIGKATGRGQY
::::::::::::::
CCDS47 KDISIGKATGRGQY
2710 2720
2264 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:23:47 2016 done: Sat Nov 5 02:23:49 2016
Total Scan time: 7.960 Total Display time: 0.260
Function used was FASTA [36.3.4 Apr, 2011]