(Circular) (Six-base) MAPSORT of: pF1KA0563.seq Check: 5863 from: 1 to: 8015 pF1KA0563 8015 bp With 182 enzymes: SgfI * June 20, 2008 10:19 .. AccI GT'mk_AC Cuts at: 3800 4110 5053 3800 Size: 310 943 6762 Fragments arranged by size: 6762 943 310 Acc65I G'GTAC_C Cuts at: 5031 5031 Size: 8015 AclI AA'CG_TT Cuts at: 7855 7855 Size: 8015 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 577 1019 2198 2492 3302 4226 5840 6272 7019 Size: 442 1179 294 810 924 1614 432 747 Cuts at: 7019 7287 577 Size: 268 1305 Fragments arranged by size: 1614 1305 1179 924 810 747 442 432 294 268 AflII C'TTAA_G Cuts at: 3121 4191 3121 Size: 1070 6945 AflIII A'CryG_T Cuts at: 5367 6471 7448 5367 Size: 1104 977 5934 Fragments arranged by size: 5934 1104 977 AgeI A'CCGG_T Cuts at: 6403 6403 Size: 8015 AhdI GACnn_n'nnGTC Cuts at: 807 1256 807 Size: 449 7566 AleI CACnn'nnGTG Cuts at: 135 135 Size: 8015 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1616 1616 Size: 8015 AlwNI CAG_nnn'CTG Cuts at: 225 2395 2454 3597 3844 4548 5320 6887 225 Size: 2170 59 1143 247 704 772 1567 1353 Fragments arranged by size: 2170 1567 1353 1143 772 704 247 59 ApaI G_GGCC'C Cuts at: 169 374 734 1483 3619 4632 169 Size: 205 360 749 2136 1013 3552 Fragments arranged by size: 3552 2136 1013 749 360 205 ApaLI G'TGCA_C Cuts at: 6785 6785 Size: 8015 ApoI r'AATT_y Cuts at: 420 2718 4161 4529 5019 7368 7624 420 Size: 2298 1443 368 490 2349 256 811 Fragments arranged by size: 2349 2298 1443 811 490 368 256 AscI GG'CGCG_CC Cuts at: 3869 3869 Size: 8015 AseI AT'TA_AT Cuts at: 20 1565 4763 20 Size: 1545 3198 3272 Fragments arranged by size: 3272 3198 1545 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 8015 AvaI C'yCGr_G Cuts at: 2084 4474 5035 2084 Size: 2390 561 5064 Fragments arranged by size: 5064 2390 561 BamHI G'GATC_C Cuts at: 5040 5040 Size: 8015 BanI G'GyrC_C Cuts at: 2701 3682 5031 5445 5693 5728 2701 Size: 981 1349 414 248 35 4988 Fragments arranged by size: 4988 1349 981 414 248 35 BanII G_rGCy'C Cuts at: 169 284 374 734 773 1483 2606 2687 3383 Size: 115 90 360 39 710 1123 81 696 Cuts at: 3383 3619 4481 4632 5029 6059 169 Size: 236 862 151 397 1030 2125 Fragments arranged by size: 2125 1123 1030 862 710 696 397 360 236 151 115 90 81 39 BbeI G_GCGC'C Cuts at: 5449 5697 5449 Size: 248 7767 BbsI GAAGACnn'nnnn_ Cuts at: 281 806 1205 1631 2425 3991 4753 281 Size: 525 399 426 794 1566 762 3543 Fragments arranged by size: 3543 1566 794 762 525 426 399 BbvCI CC'TCA_GC Cuts at: 1625 1625 Size: 8015 BciVI GTATCCnnnnn_n' Cuts at: 689 4725 5913 6674 8015 689 Size: 4036 1188 761 1341 689 Fragments arranged by size: 4036 1341 1188 761 689 BclI T'GATC_A Cuts at: 360 4518 5535 360 Size: 4158 1017 2840 Fragments arranged by size: 4158 2840 1017 BglI GCCn_nnn'nGGC Cuts at: 729 729 Size: 8015 BglII A'GATC_T Cuts at: 4916 5530 7567 4916 Size: 614 2037 5364 Fragments arranged by size: 5364 2037 614 BlpI GC'TnA_GC Cuts at: 218 572 1607 1901 2231 5127 218 Size: 354 1035 294 330 2896 3106 Fragments arranged by size: 3106 2896 1035 354 330 294 Bme1580I G_kGCm'C Cuts at: 127 169 374 734 1483 3619 3687 4462 4632 Size: 42 205 360 749 2136 68 775 170 Cuts at: 4632 5640 5733 6789 127 Size: 1008 93 1056 1353 Fragments arranged by size: 2136 1353 1056 1008 775 749 360 205 170 93 68 42 BmgBI CAC'GTC Cuts at: 1356 1356 Size: 8015 BmrI ACTGGGnnnn_n' Cuts at: 1325 5227 5308 5643 7787 1325 Size: 3902 81 335 2144 1553 Fragments arranged by size: 3902 2144 1553 335 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 944 1596 2355 3399 6382 944 Size: 652 759 1044 2983 2577 Fragments arranged by size: 2983 2577 1044 759 652 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 232 247 476 490 680 710 805 887 944 Size: 15 229 14 190 30 95 82 57 Cuts at: 944 1130 1250 1280 1334 1658 1691 1754 1946 Size: 186 120 30 54 324 33 63 192 Cuts at: 1946 2168 2296 2434 2836 3867 4647 232 Size: 222 128 138 402 1031 780 3600 Fragments arranged by size: 3600 1031 780 402 324 229 222 192 190 186 138 128 120 95 82 63 57 54 33 30 30 15 14 Bpu10I CC'TnA_GC Cuts at: 278 1625 2507 278 Size: 1347 882 5786 Fragments arranged by size: 5786 1347 882 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 877 1712 2234 4193 4828 4947 5191 6070 6562 Size: 835 522 1959 635 119 244 879 492 Cuts at: 6562 6860 877 Size: 298 2032 Fragments arranged by size: 2032 1959 879 835 635 522 492 298 244 119 BsaI GGTCTCn'nnnn_ Cuts at: 784 1072 1243 1807 2329 4190 7719 784 Size: 288 171 564 522 1861 3529 1080 Fragments arranged by size: 3529 1861 1080 564 522 288 171 BsaAI yAC'GTr Cuts at: 5368 5368 Size: 8015 BsaBI GATnn'nnATC Cuts at: 6 3053 5529 7566 6 Size: 3047 2476 2037 455 Fragments arranged by size: 3047 2476 2037 455 BsaHI Gr'CG_yC Cuts at: 5446 5694 6396 7892 5446 Size: 248 702 1496 5569 Fragments arranged by size: 5569 1496 702 248 BsaWI w'CCGG_w Cuts at: 1554 4601 5204 5725 6403 6677 6824 7235 1554 Size: 3047 603 521 678 274 147 411 2334 Fragments arranged by size: 3047 2334 678 603 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1621 1651 1752 1782 1812 1842 1944 1974 2109 Size: 30 101 30 30 30 102 30 135 Cuts at: 2109 2139 2160 2163 2190 2193 2412 2442 2563 Size: 30 21 3 27 3 219 30 121 Cuts at: 2563 2593 1621 Size: 30 7043 Fragments arranged by size: 7043 219 135 121 102 101 30 30 30 30 30 30 30 30 27 21 3 3 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 288 1114 1642 2168 2171 2347 2420 3391 5002 Size: 826 528 526 3 176 73 971 1611 Cuts at: 5002 5005 288 Size: 3 3298 Fragments arranged by size: 3298 1611 971 826 528 526 176 73 3 3 BseYI C'CCAG_C Cuts at: 339 834 891 1070 1241 1589 1662 1918 4390 Size: 495 57 179 171 348 73 256 2472 Cuts at: 4390 4541 5440 6198 6775 7271 339 Size: 151 899 758 577 496 1083 Fragments arranged by size: 2472 1083 899 758 577 496 495 348 256 179 171 151 73 57 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1378 1406 2542 2543 1378 Size: 28 1136 1 6850 Fragments arranged by size: 6850 1136 28 1 BsiEI CG_ry'CG Cuts at: 104 5557 5603 6811 104 Size: 5453 46 1208 1308 Fragments arranged by size: 5453 1308 1208 46 BsiHKAI G_wGCw'C Cuts at: 2606 4774 5029 5807 5997 6789 2606 Size: 2168 255 778 190 792 3832 Fragments arranged by size: 3832 2168 792 778 255 190 BsmI GAATG_Cn' Cuts at: 1713 2070 2235 2999 4399 1713 Size: 357 165 764 1400 5329 Fragments arranged by size: 5329 1400 764 357 165 BsmBI CGTCTCn'nnnn_ Cuts at: 4665 4665 Size: 8015 Bsp1286I G_dGCh'C Cuts at: 127 169 284 374 734 773 1483 2606 2687 Size: 42 115 90 360 39 710 1123 81 Cuts at: 2687 3383 3619 3687 4462 4481 4632 4774 5029 Size: 696 236 68 775 19 151 142 255 Cuts at: 5029 5640 5733 5807 5997 6059 6789 127 Size: 611 93 74 190 62 730 1353 Fragments arranged by size: 1353 1123 775 730 710 696 611 360 255 236 190 151 142 115 93 90 81 74 68 62 42 39 19 BspEI T'CCGG_A Cuts at: 1554 4601 7235 1554 Size: 3047 2634 2334 Fragments arranged by size: 3047 2634 2334 BspHI T'CATG_A Cuts at: 939 1275 3134 3317 7191 939 Size: 336 1859 183 3874 1763 Fragments arranged by size: 3874 1859 1763 336 183 BspMI ACCTGCnnnn'nnnn_ Cuts at: 1017 2511 2620 5065 5279 5581 5962 1017 Size: 1494 109 2445 214 302 381 3070 Fragments arranged by size: 3070 2445 1494 381 302 214 109 BsrBI CCG'CTC Cuts at: 50 118 246 6307 6361 7845 8010 50 Size: 68 128 6061 54 1484 165 55 Fragments arranged by size: 6061 1484 165 128 68 55 54 BsrDI GCAATG_nn' Cuts at: 2952 3240 4498 4586 5927 2952 Size: 288 1258 88 1341 5040 Fragments arranged by size: 5040 1341 1258 288 88 BsrFI r'CCGG_y Cuts at: 3587 6013 6194 6403 3587 Size: 2426 181 209 5199 Fragments arranged by size: 5199 2426 209 181 BssHII G'CGCG_C Cuts at: 3869 3869 Size: 8015 BssSI C'ACGA_G Cuts at: 6286 6644 6286 Size: 358 7657 BstAPI GCAn_nnn'nTGC Cuts at: 2994 4291 5392 2994 Size: 1297 1101 5617 Fragments arranged by size: 5617 1297 1101 BstBI TT'CG_AA Cuts at: 6376 6376 Size: 8015 BstEII G'GTnAC_C Cuts at: 1023 1300 1023 Size: 277 7738 BstYI r'GATC_y Cuts at: 1 564 1749 3048 4916 5040 5507 5530 5865 Size: 563 1185 1299 1868 124 467 23 335 Cuts at: 5865 6111 7123 7209 7221 7567 1 Size: 246 1012 86 12 346 449 Fragments arranged by size: 1868 1299 1185 1012 563 467 449 346 335 246 124 86 23 12 Bsu36I CC'TnA_GG Cuts at: 2030 2195 4376 2030 Size: 165 2181 5669 Fragments arranged by size: 5669 2181 165 BtgI C'CryG_G Cuts at: 169 310 349 2327 169 Size: 141 39 1978 5857 Fragments arranged by size: 5857 1978 141 39 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 5965 6146 6309 5965 Size: 181 163 7671 Fragments arranged by size: 7671 181 163 BtsI GCAGTG_nn' Cuts at: 3399 3704 5258 3399 Size: 305 1554 6156 Fragments arranged by size: 6156 1554 305 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 178 213 178 Size: 35 7980 DraI TTT'AAA Cuts at: 506 3063 3201 5014 506 Size: 2557 138 1813 3507 Fragments arranged by size: 3507 2557 1813 138 DraIII CAC_nnn'GTG Cuts at: 1333 1333 Size: 8015 DrdI GACnn_nn'nnGTC Cuts at: 5721 6579 5721 Size: 858 7157 EaeI y'GGCC_r Cuts at: 5600 5774 6165 6192 7537 5600 Size: 174 391 27 1345 6078 Fragments arranged by size: 6078 1345 391 174 27 EagI C'GGCC_G Cuts at: 5600 5600 Size: 8015 EarI CTCTTCn'nnn_ Cuts at: 819 1996 4144 6038 6248 819 Size: 1177 2148 1894 210 2586 Fragments arranged by size: 2586 2148 1894 1177 210 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 2653 6223 6533 6679 7825 2653 Size: 3570 310 146 1146 2843 Fragments arranged by size: 3570 2843 1146 310 146 EcoICRI GAG'CTC Cuts at: 2604 5027 2604 Size: 2423 5592 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 232 247 476 490 577 680 710 805 887 Size: 15 229 14 87 103 30 95 82 Cuts at: 887 944 1019 1130 1250 1280 1334 1658 1691 Size: 57 75 111 120 30 54 324 33 Cuts at: 1691 1754 1946 2168 2198 2296 2434 2492 2836 Size: 63 192 222 30 98 138 58 344 Cuts at: 2836 3302 3867 4226 4647 5840 6272 7019 7287 Size: 466 565 359 421 1193 432 747 268 Cuts at: 7287 232 Size: 960 Fragments arranged by size: 1193 960 747 565 466 432 421 359 344 324 268 229 222 192 138 120 111 103 98 95 87 82 75 63 58 57 54 33 30 30 30 15 14 EcoNI CCTnn'n_nnAGG Cuts at: 2183 3904 4172 2183 Size: 1721 268 6026 Fragments arranged by size: 6026 1721 268 EcoO109I rG'GnC_Cy Cuts at: 165 240 370 371 730 731 888 1131 1479 Size: 75 130 1 359 1 157 243 348 Cuts at: 1479 1659 3772 4628 5154 165 Size: 180 2113 856 526 3026 Fragments arranged by size: 3026 2113 856 526 359 348 243 180 157 130 75 1 1 EcoRI G'AATT_C Cuts at: 5019 5019 Size: 8015 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 6034 6034 Size: 8015 FspI TGC'GCA Cuts at: 5796 5796 Size: 8015 HaeII r_GCGC'y Cuts at: 5449 5697 6719 7698 5449 Size: 248 1022 979 5766 Fragments arranged by size: 5766 1022 979 248 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 102 134 271 303 793 825 1042 1074 1213 Size: 32 137 32 490 32 217 32 139 Cuts at: 1213 1242 1245 1274 1621 1653 1806 1838 1940 Size: 29 3 29 347 32 153 32 102 Cuts at: 1940 1972 2160 2192 2328 2354 2360 2386 2412 Size: 32 188 32 136 26 6 26 26 Cuts at: 2412 2442 2444 2474 2614 2646 3496 3528 4103 Size: 30 2 30 140 32 850 32 575 Cuts at: 4103 4135 4908 4940 5857 5887 5889 5919 102 Size: 32 773 32 917 30 2 30 2198 Fragments arranged by size: 2198 917 850 773 575 490 347 217 188 153 140 139 137 136 102 32 32 32 32 32 32 32 32 32 32 32 32 30 30 30 30 29 29 26 26 26 6 3 2 2 HincII GTy'rAC Cuts at: 3498 5054 3498 Size: 1556 6459 HindIII A'AGCT_T Cuts at: 974 4485 4684 974 Size: 3511 199 4305 Fragments arranged by size: 4305 3511 199 HpaI GTT'AAC Cuts at: 3498 3498 Size: 8015 KasI G'GCGC_C Cuts at: 5445 5693 5445 Size: 248 7767 KpnI G_GTAC'C Cuts at: 5035 5035 Size: 8015 MfeI C'AATT_G Cuts at: 1136 1136 Size: 8015 MluI A'CGCG_T Cuts at: 7448 7448 Size: 8015 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 559 726 1261 1609 1825 1903 1962 2347 2755 Size: 167 535 348 216 78 59 385 408 Cuts at: 2755 6686 6870 559 Size: 3931 184 1704 Fragments arranged by size: 3931 1704 535 408 385 348 216 184 167 78 59 MscI TGG'CCA Cuts at: 5776 5776 Size: 8015 MslI CAynn'nnrTG Cuts at: 135 3133 3322 4327 6004 6131 135 Size: 2998 189 1005 1677 127 2019 Fragments arranged by size: 2998 2019 1677 1005 189 127 MspA1I CmG'CkG Cuts at: 153 252 454 1606 1624 4390 4548 5126 5440 Size: 99 202 1152 18 2766 158 578 314 Cuts at: 5440 5800 6813 7058 153 Size: 360 1013 245 1110 Fragments arranged by size: 2766 1152 1110 1013 578 360 314 245 202 158 99 18 NaeI GCC'GGC Cuts at: 6196 6196 Size: 8015 NarI GG'CG_CC Cuts at: 5446 5694 5446 Size: 248 7767 NcoI C'CATG_G Cuts at: 169 169 Size: 8015 NdeI CA'TA_TG Cuts at: 2596 3176 2596 Size: 580 7435 NgoMIV G'CCGG_C Cuts at: 6194 6194 Size: 8015 NspI r_CATG'y Cuts at: 3257 4332 5068 5568 6475 3257 Size: 1075 736 500 907 4797 Fragments arranged by size: 4797 1075 907 736 500 PasI CC'CwG_GG Cuts at: 267 267 Size: 8015 PciI A'CATG_T Cuts at: 6471 6471 Size: 8015 PflMI CCAn_nnn'nTGG Cuts at: 4834 4834 Size: 8015 PfoI T'CCnGG_A Cuts at: 434 2184 4663 4827 434 Size: 1750 2479 164 3622 Fragments arranged by size: 3622 2479 1750 164 PmeI GTTT'AAAC Cuts at: 5014 5014 Size: 8015 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2078 2110 7154 7186 2078 Size: 32 5044 32 2907 Fragments arranged by size: 5044 2907 32 32 PpuMI rG'GwC_Cy Cuts at: 240 240 Size: 8015 PshAI GACnn'nnGTC Cuts at: 2222 2473 4202 2222 Size: 251 1729 6035 Fragments arranged by size: 6035 1729 251 PsiI TTA'TAA Cuts at: 2932 2932 Size: 8015 PspOMI G'GGCC_C Cuts at: 165 370 730 1479 3615 4628 165 Size: 205 360 749 2136 1013 3552 Fragments arranged by size: 3552 2136 1013 749 360 205 PspXI vC'TCGA_Gb Cuts at: 2084 2084 Size: 8015 PstI C_TGCA'G Cuts at: 1014 1605 4146 4553 5062 5747 1014 Size: 591 2541 407 509 685 3282 Fragments arranged by size: 3282 2541 685 591 509 407 PvuI CG_AT'CG Cuts at: 104 104 Size: 8015 PvuII CAG'CTG Cuts at: 252 454 1606 4548 5440 5800 252 Size: 202 1152 2942 892 360 2467 Fragments arranged by size: 2942 2467 1152 892 360 202 RsrII CG'GwC_CG Cuts at: 6210 6210 Size: 8015 SacI G_AGCT'C Cuts at: 2606 5029 2606 Size: 2423 5592 SalI G'TCGA_C Cuts at: 5052 5052 Size: 8015 SapI GCTCTTCn'nnn_ Cuts at: 4144 6038 6248 4144 Size: 1894 210 5911 Fragments arranged by size: 5911 1894 210 SbfI CC_TGCA'GG Cuts at: 5062 5062 Size: 8015 ScaI AGT'ACT Cuts at: 7532 7532 Size: 8015 SexAI A'CCwGG_T Cuts at: 1884 2054 1884 Size: 170 7845 SfcI C'TryA_G Cuts at: 33 1010 1601 2009 2156 2171 2303 2387 2405 Size: 977 591 408 147 15 132 84 18 Cuts at: 2405 2423 3293 3575 4142 4549 5058 5743 6736 Size: 18 870 282 567 407 509 685 993 Cuts at: 6736 6927 33 Size: 191 1121 Fragments arranged by size: 1121 993 977 870 685 591 567 509 408 407 282 191 147 132 84 18 18 15 SfoI GGC'GCC Cuts at: 5447 5695 5447 Size: 248 7767 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 8015 SmaI CCC'GGG Cuts at: 5037 5037 Size: 8015 SmlI C'TyrA_G Cuts at: 856 1727 2084 2249 3121 4191 4208 4807 4962 Size: 871 357 165 872 1070 17 599 155 Cuts at: 4962 5170 6085 6577 6839 856 Size: 208 915 492 262 2032 Fragments arranged by size: 2032 1070 915 872 871 599 492 357 262 208 165 155 17 SpeI A'CTAG_T Cuts at: 67 204 67 Size: 137 7878 SphI G_CATG'C Cuts at: 5068 5568 5068 Size: 500 7515 SspI AAT'ATT Cuts at: 658 658 Size: 8015 StuI AGG'CCT Cuts at: 2578 2840 2983 2578 Size: 262 143 7610 Fragments arranged by size: 7610 262 143 StyI C'CwwG_G Cuts at: 169 2724 3619 3739 3863 4064 5149 5503 169 Size: 2555 895 120 124 201 1085 354 2681 Fragments arranged by size: 2681 2555 1085 895 354 201 124 120 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1344 1932 2554 2707 2794 3835 4077 5598 5731 Size: 588 622 153 87 1041 242 1521 133 Cuts at: 5731 6190 6399 1344 Size: 459 209 2960 Fragments arranged by size: 2960 1521 1041 622 588 459 242 209 153 133 87 TatI w'GTAC_w Cuts at: 664 3460 7530 664 Size: 2796 4070 1149 Fragments arranged by size: 4070 2796 1149 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 601 633 2563 2595 3261 3293 3928 3960 7532 Size: 32 1930 32 666 32 635 32 3572 Cuts at: 7532 7564 601 Size: 32 1052 Fragments arranged by size: 3572 1930 1052 666 635 32 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 5812 5812 Size: 8015 XbaI T'CTAG_A Cuts at: 765 3084 5046 765 Size: 2319 1962 3734 Fragments arranged by size: 3734 2319 1962 XcmI CCAnnnn_n'nnnnTGG Cuts at: 347 575 5510 347 Size: 228 4935 2852 Fragments arranged by size: 4935 2852 228 XhoI C'TCGA_G Cuts at: 2084 2084 Size: 8015 XmaI C'CCGG_G Cuts at: 5035 5035 Size: 8015 XmnI GAAnn'nnTTC Cuts at: 3856 3856 Size: 8015 Enzymes that do cut: AccI Acc65I AclI AcuI AflII AflIII AgeI AhdI AleI AlfI AlwNI ApaI ApaLI ApoI AscI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BbvCI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BssHII BssSI BstAPI BstBI BstEII BstYI Bsu36I BtgI BtgZI BtsI CspCI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NdeI NgoMIV NspI PasI PciI PflMI PfoI PmeI PpiI PpuMI PshAI PsiI PspOMI PspXI PstI PvuI PvuII RsrII SacI SalI SapI SbfI ScaI SexAI SfcI SfoI SgfI SmaI SmlI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI Enzymes that do not cut: AarI AatII AfeI AloI AvrII BaeI BcgI BfrBI BmtI BsiWI BsrGI BstXI BstZ17I ClaI EcoRV FseI FspAI NheI NotI NruI NsiI PacI PmlI PsrI SacII SanDI SfiI SgrAI SnaBI SrfI SwaI ZraI