Result of FASTA (ccds) for
pF1KA0583
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0583, 1919 aa
1>>>pF1KA0583 1919 - 1919 aa - 1919 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.7939+/-0.00127; mu= -15.2139+/- 0.076
mean_var=442.9989+/-90.428, 0's: 0 Z-trim(112.1): 58 B-trim: 11 in 1/54
Lambda= 0.060936
statistics sampled from 12840 (12887) to 12840 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.396), width: 16
Scan time: 5.700
The best scores are: opt bits E(32554)
CCDS7353.2 DLG5 gene_id:9231|Hs108|chr10 (1919) 12665 1129.6 0
>>CCDS7353.2 DLG5 gene_id:9231|Hs108|chr10 (1919 aa)
initn: 12665 init1: 12665 opt: 12665 Z-score: 6032.2 bits: 1129.6 E(32554): 0
Smith-Waterman score: 12665; 99.9% identity (100.0% similar) in 1919 aa overlap (1-1919:1-1919)
10 20 30 40 50 60
pF1KA0 MEPQRRELLAQCQQSLAQAMTEVEAVLGLLEAAGALSPGERRQLDEEAGGAKAELLLKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MEPQRRELLAQCQQSLAQAMTEVEAVLGLLEAAGALSPGERRQLDEEAGGAKAELLLKLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 LAKERDHFQDLRAALEKTQPHLLPILYLNGVVGPPQPAEGAGSTYSVLSTMPSDSESSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LAKERDHFQDLRAALEKTQPHLLPILYLNGVVGPPQPAEGAGSTYSVLSTMPSDSESSSS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LSSVGTTGKAPSPPPLLTDRQVNEKVENLSIQLRLMTRERNELRKRLAFATHGTAFDKRP
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
CCDS73 LSSVGTTGKAPSPPPLLTDQQVNEKVENLSIQLRLMTRERNELRKRLAFATHGTAFDKRP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YHRLNPDYERLKIQCVRAMSDLQSLQNQHTNALKRCEEVAKETDFYHTLHSRLLSDQTRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YHRLNPDYERLKIQCVRAMSDLQSLQNQHTNALKRCEEVAKETDFYHTLHSRLLSDQTRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 KDDVDMLRRENGQLLRERNLLQQSWEDMKRLHEEDQKEIGDLRAQQQQVLKHNGSSEILN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KDDVDMLRRENGQLLRERNLLQQSWEDMKRLHEEDQKEIGDLRAQQQQVLKHNGSSEILN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 KLYDTAMDKLEVVKKDYDALRKRYSEKVAIHNADLSRLEQLGEENQRLLKQTEMLTQQRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KLYDTAMDKLEVVKKDYDALRKRYSEKVAIHNADLSRLEQLGEENQRLLKQTEMLTQQRD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 TAIQLQHQCALSLRRFEAIHHELNKATAQNKDLQWEMELLQSELTELRTTQVKTAKESEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TAIQLQHQCALSLRRFEAIHHELNKATAQNKDLQWEMELLQSELTELRTTQVKTAKESEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 YREERDAVYSEYKLIMSERDQVISELDKLQTEVELAESKLKSSTSEKKAANEEMEALRQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YREERDAVYSEYKLIMSERDQVISELDKLQTEVELAESKLKSSTSEKKAANEEMEALRQI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KDTVTMDAGRANKEVEILRKQCKALCQELKEALQEADVAKCRRDWAFQERDKIVAERDSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KDTVTMDAGRANKEVEILRKQCKALCQELKEALQEADVAKCRRDWAFQERDKIVAERDSI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 RTLCDNLRRERDRAVSELAEALRSLDDTRKQKNDVSRELKELKEQMESQLEKEARFRQLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RTLCDNLRRERDRAVSELAEALRSLDDTRKQKNDVSRELKELKEQMESQLEKEARFRQLM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 AHSSHDSAIDTDSMEWETEVVEFERETEDIDLKALGFDMAEGVNEPCFPGDCGIFVTKVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 AHSSHDSAIDTDSMEWETEVVEFERETEDIDLKALGFDMAEGVNEPCFPGDCGIFVTKVD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 KGSIADGRLRVNDWLLRINDVDLINKDKKQAIKALLNGEGAINMVVRRRKSLGGKVVTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KGSIADGRLRVNDWLLRINDVDLINKDKKQAIKALLNGEGAINMVVRRRKSLGGKVVTPL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 HINLSGQKDSGISLENGVYAAAVLPGSPAAKEGSLAVGDRIVAINGIALDNKSLNECESL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HINLSGQKDSGISLENGVYAAAVLPGSPAAKEGSLAVGDRIVAINGIALDNKSLNECESL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 LRSCQDSLTLSLLKVFPQSSSWSGQNIFENIKDSDKMLSFRAHGPEVQAHNKRNLIQHNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LRSCQDSLTLSLLKVFPQSSSWSGQNIFENIKDSDKMLSFRAHGPEVQAHNKRNLIQHNN
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 STQTDIFYTDRLEDRKEPGPPGGSSSFLHKPFPGGPLQVCPQACPSASERSLSSFRSDAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 STQTDIFYTDRLEDRKEPGPPGGSSSFLHKPFPGGPLQVCPQACPSASERSLSSFRSDAS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 GDRGFGLVDVRGRRPLLPFETEVGPCGVGEASLDKADSEGSNSGGTWPKAMLSSTAVPEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GDRGFGLVDVRGRRPLLPFETEVGPCGVGEASLDKADSEGSNSGGTWPKAMLSSTAVPEK
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 LSVYKKPKQRKSIFDPNTFKRPQTPPKIDYLLPGPGPAHSPQPSKRAGPLTPPKPPRRSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LSVYKKPKQRKSIFDPNTFKRPQTPPKIDYLLPGPGPAHSPQPSKRAGPLTPPKPPRRSD
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 SIKFQHRLETSSESEATLVGSSPSTSPPSALPPDVDPGEPMHASPPRKARVRIASSYYPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SIKFQHRLETSSESEATLVGSSPSTSPPSALPPDVDPGEPMHASPPRKARVRIASSYYPE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 GDGDSSHLPAKKSCDEDLTSQKVDELGQKRRRPKSAPSFRPKLAPVVIPAQFLEEQKCVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GDGDSSHLPAKKSCDEDLTSQKVDELGQKRRRPKSAPSFRPKLAPVVIPAQFLEEQKCVP
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 ASGELSPELQEWAPYSPGHSSRHSNPPLYPSRPSVGTVPRSLTPSTTVSSILRNPIYTVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ASGELSPELQEWAPYSPGHSSRHSNPPLYPSRPSVGTVPRSLTPSTTVSSILRNPIYTVR
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 SHRVGPCSSPPAARDAGPQGLHPSVQHQGRLSLDLSHRTCSDYSEMRATHGSNSLPSSAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SHRVGPCSSPPAARDAGPQGLHPSVQHQGRLSLDLSHRTCSDYSEMRATHGSNSLPSSAR
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 LGSSSNLQFKAERIKIPSTPRYPRSVVGSERGSVSHSECSTPPQSPLNIDTLSSCSQSQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LGSSSNLQFKAERIKIPSTPRYPRSVVGSERGSVSHSECSTPPQSPLNIDTLSSCSQSQT
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 SASTLPRIAVNPASLGERRKDRPYVEEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SASTLPRIAVNPASLGERRKDRPYVEEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVG
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 SIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVHQLSSHSRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVHQLSSHSRS
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 SSHLDPAGTHSTLQGSGTTTPEHPSVIDPLMEQDEGPSTPPAKQSSSRIAGDANKKTLEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SSHLDPAGTHSTLQGSGTTTPEHPSVIDPLMEQDEGPSTPPAKQSSSRIAGDANKKTLEP
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 RVVFIKKSQLELGVHLCGGNLHGVFVAEVEDDSPAKGPDGLVPGDLILEYGSLDVRNKTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RVVFIKKSQLELGVHLCGGNLHGVFVAEVEDDSPAKGPDGLVPGDLILEYGSLDVRNKTV
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 EEVYVEMLKPRDGVRLKVQYRPEEFTKAKGLPGDSFYIRALYDRLADVEQELSFKKDDIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EEVYVEMLKPRDGVRLKVQYRPEEFTKAKGLPGDSFYIRALYDRLADVEQELSFKKDDIL
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 YVDDTLPQGTFGSWMAWQLDENAQKIQRGQIPSKYVMDQEFSRRLSMSEVKDDNSATKTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YVDDTLPQGTFGSWMAWQLDENAQKIQRGQIPSKYVMDQEFSRRLSMSEVKDDNSATKTL
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA0 SAAARRSFFRRKHKHKRSGSKDGKDLLALDAFSSDSIPLFEDSVSLAYQRVQKVDCTALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SAAARRSFFRRKHKHKRSGSKDGKDLLALDAFSSDSIPLFEDSVSLAYQRVQKVDCTALR
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA0 PVLILGPLLDVVKEMLVNEAPGKFCRCPLEVMKASQQAIERGVKDCLFVDYKRRSGHFDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PVLILGPLLDVVKEMLVNEAPGKFCRCPLEVMKASQQAIERGVKDCLFVDYKRRSGHFDV
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA0 TTVASIKEITEKNRHCLLDIAPHAIERLHHMHIYPIVIFIHYKSAKHIKEQRDPIYLRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TTVASIKEITEKNRHCLLDIAPHAIERLHHMHIYPIVIFIHYKSAKHIKEQRDPIYLRDK
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910
pF1KA0 VTQRHSKEQFEAAQKLEQEYSRYFTGVIQGGALSSICTQILAMVNQEQNKVLWIPACPL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VTQRHSKEQFEAAQKLEQEYSRYFTGVIQGGALSSICTQILAMVNQEQNKVLWIPACPL
1870 1880 1890 1900 1910
1919 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 09:47:38 2016 done: Thu Nov 3 09:47:39 2016
Total Scan time: 5.700 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]