Result of FASTA (ccds) for
pF1KA0602
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0602, 904 aa
1>>>pF1KA0602 904 - 904 aa - 904 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.8038+/-0.000903; mu= 7.1034+/- 0.055
mean_var=176.0681+/-35.429, 0's: 0 Z-trim(112.2): 5 B-trim: 110 in 1/53
Lambda= 0.096657
statistics sampled from 13029 (13034) to 13029 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.4), width: 16
Scan time: 4.620
The best scores are: opt bits E(32554)
CCDS45178.2 PACS2 gene_id:23241|Hs108|chr14 ( 904) 5981 846.5 0
CCDS32168.1 PACS2 gene_id:23241|Hs108|chr14 ( 889) 4368 621.5 2.1e-177
CCDS8129.1 PACS1 gene_id:55690|Hs108|chr11 ( 963) 2331 337.5 7.1e-92
CCDS58339.1 PACS2 gene_id:23241|Hs108|chr14 ( 814) 1491 220.3 1.1e-56
>>CCDS45178.2 PACS2 gene_id:23241|Hs108|chr14 (904 aa)
initn: 5981 init1: 5981 opt: 5981 Z-score: 4514.1 bits: 846.5 E(32554): 0
Smith-Waterman score: 5981; 100.0% identity (100.0% similar) in 904 aa overlap (1-904:1-904)
10 20 30 40 50 60
pF1KA0 MAERGRLGLPGAPGALNTPVPMNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAERGRLGLPGAPGALNTPVPMNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 SVVIAVKMQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SVVIAVKMQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 YKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 YKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 HEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKPKKQRRSIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKPKKQRRSIV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 RTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPAEHIPEAEEDLDLLYDTLDMEHPSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPAEHIPEAEEDLDLLYDTLDMEHPSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 SGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHKEPPSPADVPEKTRSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHKEPPSPADVPEKTRSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 GGRQPSDSVSDTVALGVPGPREHPGQPEDSPEAEASTLDVFTERLPPSGRITKTESLVIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GGRQPSDSVSDTVALGVPGPREHPGQPEDSPEAEASTLDVFTERLPPSGRITKTESLVIP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 STRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNERCPDARSQLQVQLQIPRKTVYDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 STRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNERCPDARSQLQVQLQIPRKTVYDQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 LNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPADVQAAFSTIVSRIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPADVQAAFSTIVSRIQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 RYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLGYMRFLVIPLGSHPVAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLGYMRFLVIPLGSHPVAR
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 YLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDIVSRITQYIAGANCAHQLPIAEAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 YLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDIVSRITQYIAGANCAHQLPIAEAM
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 LTYKQKRKKHFHFDFTLSPDEESSQKFIPFVGVVKVGIVEPSSATSGDSDDAAPSGSGTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LTYKQKRKKHFHFDFTLSPDEESSQKFIPFVGVVKVGIVEPSSATSGDSDDAAPSGSGTL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 SSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTAAQPADRKRDAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTAAQPADRKRDAE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 KKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKKVMFLPKKAKDKDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKKVMFLPKKAKDKDV
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 ESKSQCIEGISRLICTARQQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ESKSQCIEGISRLICTARQQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHS
850 860 870 880 890 900
pF1KA0 KATF
::::
CCDS45 KATF
>>CCDS32168.1 PACS2 gene_id:23241|Hs108|chr14 (889 aa)
initn: 4545 init1: 3068 opt: 4368 Z-score: 3298.6 bits: 621.5 E(32554): 2.1e-177
Smith-Waterman score: 5826; 98.3% identity (98.3% similar) in 904 aa overlap (1-904:1-889)
10 20 30 40 50 60
pF1KA0 MAERGRLGLPGAPGALNTPVPMNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MAERGRLGLPGAPGALNTPVPMNLFATWEVDGSSPSCVPRLCSLTLKKLVVFKELEKELI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 SVVIAVKMQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SVVIAVKMQGSKRILRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 YKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 YKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEIWIASLSSQPID
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 HEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKPKKQRRSIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 HEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKPKKQRRSIV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 RTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPAEHIPEAEEDLDLLYDTLDMEHPSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPAEHIPEAEEDLDLLYDTLDMEHPSD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 SGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHKEPPSPADVPEKTRSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHKEPPSPADVPEKTRSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 GGRQPSDSVSDTVALGVPGPREHPGQPEDSPEAEASTLDVFTERLPPSGRITKTESLVIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GGRQPSDSVSDTVALGVPGPREHPGQPEDSPEAEASTLDVFTERLPPSGRITKTESLVIP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 STRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNERCPDARSQLQVQLQIPRKTVYDQ
::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
CCDS32 STRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNERCPDARSQLQ----IPRKTVYDQ
430 440 450 460 470
490 500 510 520 530 540
pF1KA0 LNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPADVQAAFSTIVSRIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPADVQAAFSTIVSRIQ
480 490 500 510 520 530
550 560 570 580 590 600
pF1KA0 RYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLGYMRFLVIPLGSHPVAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLGYMRFLVIPLGSHPVAR
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA0 YLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDIVSRITQYIAGANCAHQLPIAEAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 YLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDIVSRITQYIAGANCAHQLPIAEAM
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA0 LTYKQKRKKHFHFDFTLSPDEESSQKFIPFVGVVKVGIVEPSSATSGDSDDAAPSGSGTL
:::::: :::::::::::::::::::::::::::::::::::::::::::
CCDS32 LTYKQK-----------SPDEESSQKFIPFVGVVKVGIVEPSSATSGDSDDAAPSGSGTL
660 670 680 690 700
730 740 750 760 770 780
pF1KA0 SSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTAAQPADRKRDAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTAAQPADRKRDAE
710 720 730 740 750 760
790 800 810 820 830 840
pF1KA0 KKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKKVMFLPKKAKDKDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKKVMFLPKKAKDKDV
770 780 790 800 810 820
850 860 870 880 890 900
pF1KA0 ESKSQCIEGISRLICTARQQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ESKSQCIEGISRLICTARQQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHS
830 840 850 860 870 880
pF1KA0 KATF
::::
CCDS32 KATF
>>CCDS8129.1 PACS1 gene_id:55690|Hs108|chr11 (963 aa)
initn: 2808 init1: 1112 opt: 2331 Z-score: 1762.9 bits: 337.5 E(32554): 7.1e-92
Smith-Waterman score: 3277; 59.0% identity (80.0% similar) in 908 aa overlap (10-903:87-963)
10 20 30
pF1KA0 MAERGRLGLPGAPGALNTPVP--MNLFATWEVDGSSPSC
::.:: ::.: :::.:::::: :: ::
CCDS81 SSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPVQMNLYATWEVDRSSSSC
60 70 80 90 100 110
40 50 60 70 80 90
pF1KA0 VPRLCSLTLKKLVVFKELEKELISVVIAVKMQGSKRILRSHEIVLPPSGQVETDLALTFS
:::: ::::::::..::..:.: :::::::.:::::::::.::::: :: :::.: ::::
CCDS81 VPRLFSLTLKKLVMLKEMDKDLNSVVIAVKLQGSKRILRSNEIVLPASGLVETELQLTFS
120 130 140 150 160 170
100 110 120 130 140 150
pF1KA0 LQYPHFLKREGNKLQIMLQRRKRYKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCS
:::::::::..:::::::::::::::::::::::::.: :.::::::::.::. ::.: :
CCDS81 LQYPHFLKRDANKLQIMLQRRKRYKNRTILGYKTLAVGLINMAEVMQHPNEGALVLGLHS
180 190 200 210 220 230
160 170 180 190 200 210
pF1KA0 SIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAV
..:.. : .::: : :::::::::: . . .. . ::::::: ::::::::.::: .
CCDS81 NVKDVSVPVAEIKIYSLSSQPIDHEGIKSKLSDRSPDIDNYSEEEEESFSSEQEGSDDPL
240 250 260 270 280 290
220 230 240 250 260 270
pF1KA0 QGQDLDEDDFDVGKPKKQRRSIVRTTSMTRQQNFKQKVVALLRRFKVSDEV-LDSEQDPA
.:::: .: :. : :: ::... :...::: :.::: ::::.:::::::: . :.
CCDS81 HGQDLFYEDEDLRKVKKTRRKLTSTSAITRQPNIKQKFVALLKRFKVSDEVGFGLEHVSR
300 310 320 330 340 350
280 290 300 310 320 330
pF1KA0 EHIPEAEEDLDLLYDTLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIG
:.: :.::::: :::.:.: .::::::.::. .:.::::::::.:.:::.:.::::::::
CCDS81 EQIREVEEDLDELYDSLEMYNPSDSGPEMEETESILSTPKPKLKPFFEGMSQSSSQTEIG
360 370 380 390 400 410
340 350 360 370 380 390
pF1KA0 SIHSARS-HKEPPSPADVP--EKTRSLGGRQPSDSVSDTVALGVPGPREHPGQPEDSPEA
:..: : :. :: .. :: .: .. .::...: .: . ... .
CCDS81 SLNSKGSLGKDTTSPMELAALEKIKSTWIKNQDDSLTETDTLEI---------TDQDMFG
420 430 440 450 460
400 410 420 430 440 450
pF1KA0 EASTLDVFTERLPPSGRITKTE--SLVIPSTRSEGKQAGRRGRSTSLKERQAARPQNERA
.::: : :.. . .::. . . :: . :: .. :. ::: ::::: ..: .::.
CCDS81 DASTSLVVPEKVKTPMKSSKTDLQGSASPS-KVEGVHTPRQKRSTPLKERQLSKPLSERT
470 480 490 500 510 520
460 470 480 490 500 510
pF1KA0 NSLDNERCPDARSQLQVQLQIPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDV
:: :.:: :: : . :::::.::::::.::.:: ::::.:::::.:::::.....
CCDS81 NSSDSERSPD----LGHSTQIPRKVVYDQLNQILVSDAALPENVILVNTTDWQGQYVAEL
530 540 550 560 570 580
520 530 540 550 560 570
pF1KA0 LQRHTLPVVCTCSPADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRLF
:: . ::::::: ..:::..:....::::::::::. : :::.:..:.: :::.:::.:
CCDS81 LQDQRKPVVCTCSTVEVQAVLSALLTRIQRYCNCNSSMPRPVKVAAVGGQSYLSSILRFF
590 600 610 620 630 640
580 590 600 610 620 630
pF1KA0 VEQLSHKTPDWLGYMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQSAV
:..:..:: :::::::::.:::::::::.:::::: .:.. : : .:::::.. : :
CCDS81 VKSLANKTSDWLGYMRFLIIPLGSHPVAKYLGSVDSKYSSSFLDSGWRDLFSRSEPP--V
650 660 670 680 690 700
640 650 660 670 680 690
pF1KA0 QDTPDIVSRITQYIAGANCAHQLPIAEAMLTYKQKRKKHFHFDFTLSPDEESSQKFIPFV
.. :...:. ::. :: .::::.:::::: ..: : :::.: ::::::.
CCDS81 SEQLDVAGRVMQYVNGAATTHQLPVAEAMLTCRHK------F-----PDEDSYQKFIPFI
710 720 730 740
700 710 720 730 740
pF1KA0 GVVKVGIVEPSSATSGDSDDAAPSGSGTLSST-PPSASPAAKEASPTPPSSPSVSGGLS-
::::::.:: : .:.::.::. : : :. :: :::.: ...:. :::::::.:..:.
CCDS81 GVVKVGLVEDSPSTAGDGDDS-PVVSLTVPSTSPPSSSGLSRDATATPPSSPSMSSALAI
750 760 770 780 790 800
750 760 770 780 790 800
pF1KA0 --SPSQGVGAELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNTLKCTFRSLQVSRLPSSG
::.. : ...::::::: . .:..:.:...:.: .::::: .:::.:::::: ::
CCDS81 VGSPNSPYG-DVIGLQVDYWLG-HPGERRREGDKRD-ASSKNTLKSVFRSVQVSRLPHSG
810 820 830 840 850 860
810 820 830 840 850 860
pF1KA0 EAAATPTMSMTVVTKEKNKKV--MFLPKKAKDKDVESKSQCIEGISRLICTARQQQNMLR
:: . ::.:::::::::::: .:: :: ..:.:.:::: :::::::::.:.:::.:::
CCDS81 EAQLSGTMAMTVVTKEKNKKVPTIFLSKKPREKEVDSKSQVIEGISRLICSAKQQQTMLR
870 880 890 900 910 920
870 880 890 900
pF1KA0 VLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHSKATF
: ::::: ::.::::::::: .::::::. .:. ::::
CCDS81 VSIDGVEWSDIKFFQLAAQWPTHVKHFPVGLFSGSKAT
930 940 950 960
>>CCDS58339.1 PACS2 gene_id:23241|Hs108|chr14 (814 aa)
initn: 4046 init1: 1491 opt: 1491 Z-score: 1131.0 bits: 220.3 E(32554): 1.1e-56
Smith-Waterman score: 5315; 97.3% identity (97.3% similar) in 837 aa overlap (68-904:1-814)
40 50 60 70 80 90
pF1KA0 VPRLCSLTLKKLVVFKELEKELISVVIAVKMQGSKRILRSHEIVLPPSGQVETDLALTFS
::::::::::::::::::::::::::::::
CCDS58 MQGSKRILRSHEIVLPPSGQVETDLALTFS
10 20 30
100 110 120 130 140 150
pF1KA0 LQYPHFLKREGNKLQIMLQRRKRYKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LQYPHFLKREGNKLQIMLQRRKRYKNRTILGYKTLAAGSISMAEVMQHPSEGGQVLSLCS
40 50 60 70 80 90
160 170 180 190 200 210
pF1KA0 SIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SIKEAPVKAAEIWIASLSSQPIDHEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAV
100 110 120 130 140 150
220 230 240 250 260 270
pF1KA0 QGQDLDEDDFDVGKPKKQRRSIVRTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPAE
:::::::::::::::::::::: ::::::::::::::::::::::::::::::
CCDS58 QGQDLDEDDFDVGKPKKQRRSI--------QQNFKQKVVALLRRFKVSDEVLDSEQDPAE
160 170 180 190 200
280 290 300 310 320 330
pF1KA0 HIPEAEEDLDLLYDTLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HIPEAEEDLDLLYDTLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGS
210 220 230 240 250 260
340 350 360 370 380 390
pF1KA0 IHSARSHKEPPSPADVPEKTRSLGGRQPSDSVSDTVALGVPGPREHPGQPEDSPEAEAST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IHSARSHKEPPSPADVPEKTRSLGGRQPSDSVSDTVALGVPGPREHPGQPEDSPEAEAST
270 280 290 300 310 320
400 410 420 430 440 450
pF1KA0 LDVFTERLPPSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LDVFTERLPPSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNE
330 340 350 360 370 380
460 470 480 490 500 510
pF1KA0 RCPDARSQLQVQLQIPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTL
:::::::::: ::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RCPDARSQLQ----IPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTL
390 400 410 420 430
520 530 540 550 560 570
pF1KA0 PVVCTCSPADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PVVCTCSPADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSH
440 450 460 470 480 490
580 590 600 610 620 630
pF1KA0 KTPDWLGYMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KTPDWLGYMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDI
500 510 520 530 540 550
640 650 660 670 680 690
pF1KA0 VSRITQYIAGANCAHQLPIAEAMLTYKQKRKKHFHFDFTLSPDEESSQKFIPFVGVVKVG
::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS58 VSRITQYIAGANCAHQLPIAEAMLTYKQK-----------SPDEESSQKFIPFVGVVKVG
560 570 580 590 600
700 710 720 730 740 750
pF1KA0 IVEPSSATSGDSDDAAPSGSGTLSSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IVEPSSATSGDSDDAAPSGSGTLSSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGA
610 620 630 640 650 660
760 770 780 790 800 810
pF1KA0 ELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATPTMSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ELMGLQVDYWTAAQPADRKRDAEKKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATPTMSM
670 680 690 700 710 720
820 830 840 850 860 870
pF1KA0 TVVTKEKNKKVMFLPKKAKDKDVESKSQCIEGISRLICTARQQQNMLRVLIDGVECSDVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TVVTKEKNKKVMFLPKKAKDKDVESKSQCIEGISRLICTARQQQNMLRVLIDGVECSDVK
730 740 750 760 770 780
880 890 900
pF1KA0 FFQLAAQWSSHVKHFPICIFGHSKATF
:::::::::::::::::::::::::::
CCDS58 FFQLAAQWSSHVKHFPICIFGHSKATF
790 800 810
904 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 19:24:36 2016 done: Wed Nov 2 19:24:37 2016
Total Scan time: 4.620 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]