FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0674, 1219 aa
  1>>>pF1KA0674 1219 - 1219 aa - 1219 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 13.4174+/-0.00129; mu= -13.5893+/- 0.077
 mean_var=492.5624+/-102.769, 0's: 0 Z-trim(113.6): 84  B-trim: 111 in 1/53
 Lambda= 0.057789
 statistics sampled from 14202 (14260) to 14202 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.736), E-opt: 0.2 (0.438), width:  16
 Scan time:  5.520

The best scores are:                                      opt bits E(32554)
CCDS48007.1 FKBP15 gene_id:23307|Hs108|chr9        (1219) 7884 673.0 1.2e-192


>>CCDS48007.1 FKBP15 gene_id:23307|Hs108|chr9             (1219 aa)
 initn: 7884 init1: 7884 opt: 7884  Z-score: 3572.0  bits: 673.0 E(32554): 1.2e-192
Smith-Waterman score: 7884; 99.9% identity (100.0% similar) in 1219 aa overlap (1-1219:1-1219)

               10        20        30        40        50        60
pF1KA0 MFGAGDEDDTDFLSPSGGARLASLFGLDQAAAGHGNEFFQYTAPKQPKKGQGTAATGNQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MFGAGDEDDTDFLSPSGGARLASLFGLDQAAAGHGNEFFQYTAPKQPKKGQGTAATGNQA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 TPKTAPATMSTPTILVATAVHAYRYTNGQYVKQGKFGAAVLGNHTAREYRILLYISQQQP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 TPKTAPATMSTPTILVATAVHAYRYTNGQYVKQGKFGAAVLGNHTAREYRILLYISQQQP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 VTVARIHVNFELMVRPNNYSTFYDDQRQNWSIMFESEKAAVEFNKQVCIAKCNSTSSLDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 VTVARIHVNFELMVRPNNYSTFYDDQRQNWSIMFESEKAAVEFNKQVCIAKCNSTSSLDA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 VLSQDLIVADGPAVEVGDSLEVAYTGWLFQNHVLGQVFDSTANKDKLLRLKLGSGKVIKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 VLSQDLIVADGPAVEVGDSLEVAYTGWLFQNHVLGQVFDSTANKDKLLRLKLGSGKVIKG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 WEDGMLGMKKGGKRLLIVPPACAVGSEGVIGWTQATDSILVFEVEVRRVKFARDSGSDGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 WEDGMLGMKKGGKRLLIVPPACAVGSEGVIGWTQATDSILVFEVEVRRVKFARDSGSDGH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 SVSSRDSAAPSPIPGADNLSADPVVSPPTSIPFKSGEPALRTKSNSLSEQLAINTSPDAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 SVSSRDSAAPSPIPGADNLSADPVVSPPTSIPFKSGEPALRTKSNSLSEQLAINTSPDAV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 KAKLISRMAKMGQPMLPILPPQLDSNDSEIEDVNTLQGGGQPVVTPSVQPSLQPAHPALP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
CCDS48 KAKLISRMAKMGQPMLPILPPQLDSNDSEIEDVNTLQGGGQPVVTPSVQPSLHPAHPALP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QMTSQAPQPSVTGLQAPSAALMQVSSLDSHSAVSGNAQSFQPYAGMQAYAYPQASAVTSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 QMTSQAPQPSVTGLQAPSAALMQVSSLDSHSAVSGNAQSFQPYAGMQAYAYPQASAVTSQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LQPVRPLYPAPLSQPPHFQGSGDMASFLMTEARQHNTEIRMAVSKVADKMDHLMTKVEEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 LQPVRPLYPAPLSQPPHFQGSGDMASFLMTEARQHNTEIRMAVSKVADKMDHLMTKVEEL
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 QKHSAGNSMLIPSMSVTMETSMIMSNIQRIIQENERLKQEILEKSNRIEEQNDKISELIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 QKHSAGNSMLIPSMSVTMETSMIMSNIQRIIQENERLKQEILEKSNRIEEQNDKISELIE
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 RNQRYVEQSNLMMEKRNNSLQTATENTQARVLHAEQEKAKVTEELAAATAQVSHLQLKMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 RNQRYVEQSNLMMEKRNNSLQTATENTQARVLHAEQEKAKVTEELAAATAQVSHLQLKMT
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 AHQKKETELQMQLTESLKETDLLRGQLTKVQAKLSELQETSEQAQSKFKSEKQNRKQLEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 AHQKKETELQMQLTESLKETDLLRGQLTKVQAKLSELQETSEQAQSKFKSEKQNRKQLEL
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 KVTSLEEELTDLRVEKESLEKNLSERKKKSAQERSQAEEEIDEIRKSYQEELDKLRQLLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 KVTSLEEELTDLRVEKESLEKNLSERKKKSAQERSQAEEEIDEIRKSYQEELDKLRQLLK
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 KTRVSTDQAAAEQLSLVQAELQTQWEAKCEHLLASAKDEHLQQYQEVCAQRDAYQQKLVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 KTRVSTDQAAAEQLSLVQAELQTQWEAKCEHLLASAKDEHLQQYQEVCAQRDAYQQKLVQ
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 LQEKCLALQAQITALTKQNEQHIKELEKNKSQMSGVEAAASDPSEKVKKIMNQVFQSLRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 LQEKCLALQAQITALTKQNEQHIKELEKNKSQMSGVEAAASDPSEKVKKIMNQVFQSLRR
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 EFELEESYNGRTILGTIMNTIKMVTLQLLNQQEQEKEESSSEEEEEKAEERPRRPSQEQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 EFELEESYNGRTILGTIMNTIKMVTLQLLNQQEQEKEESSSEEEEEKAEERPRRPSQEQS
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA0 ASASSGQPQAPLNRERPESPMVPSEQVVEEAVPLPPQALTTSQDGHRRKGDSEAEALSEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 ASASSGQPQAPLNRERPESPMVPSEQVVEEAVPLPPQALTTSQDGHRRKGDSEAEALSEI
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA0 KDGSLPPELSCIPSHRVLGPPTSIPPEPLGPVSMDSECEESLAASPMAAKPDNPSGKVCV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 KDGSLPPELSCIPSHRVLGPPTSIPPEPLGPVSMDSECEESLAASPMAAKPDNPSGKVCV
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KA0 REVAPDGPLQESSTRLSLTSDPEEGDPLALGPESPGEPQPPQLKKDDVTSSTGPHKELSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 REVAPDGPLQESSTRLSLTSDPEEGDPLALGPESPGEPQPPQLKKDDVTSSTGPHKELSS
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KA0 TEAGSTVAGAALRPSHHSQRSSLSGDEEDELFKGATLKALRPKAQPEEEDEDEVSMKGRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 TEAGSTVAGAALRPSHHSQRSSLSGDEEDELFKGATLKALRPKAQPEEEDEDEVSMKGRP
             1150      1160      1170      1180      1190      1200

             1210         
pF1KA0 PPTPLFGDDDDDDDIDWLG
       :::::::::::::::::::
CCDS48 PPTPLFGDDDDDDDIDWLG
             1210         




1219 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 10:02:20 2016 done: Thu Nov  3 10:02:21 2016
 Total Scan time:  5.520 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]