FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA0678, 2243 aa 1>>>pF1KA0678 2243 - 2243 aa - 2243 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3122+/-0.0015; mu= 19.5492+/- 0.090 mean_var=72.0302+/-14.484, 0's: 0 Z-trim(97.9): 54 B-trim: 252 in 2/47 Lambda= 0.151118 statistics sampled from 5162 (5198) to 5162 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.477), E-opt: 0.2 (0.16), width: 16 Scan time: 6.170 The best scores are: opt bits E(32554) CCDS33857.1 DNAJC13 gene_id:23317|Hs108|chr3 (2243) 14760 3228.8 0 >>CCDS33857.1 DNAJC13 gene_id:23317|Hs108|chr3 (2243 aa) initn: 14760 init1: 14760 opt: 14760 Z-score: 17375.1 bits: 3228.8 E(32554): 0 Smith-Waterman score: 14760; 99.9% identity (100.0% similar) in 2243 aa overlap (1-2243:1-2243) 10 20 30 40 50 60 pF1KA0 MNIIRENKDLACFYTTKHSWRGKYKRVFSVGTHAITTYNPNTLEVTNQWPYGDICSISPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MNIIRENKDLACFYTTKHSWRGKYKRVFSVGTHAITTYNPNTLEVTNQWPYGDICSISPV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 GKGQGTEFNLTFRKGSGKKSETLKFSTEHRTELLTEALRFRTDFSEGKITGRRYNCYKHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GKGQGTEFNLTFRKGSGKKSETLKFSTEHRTELLTEALRFRTDFSEGKITGRRYNCYKHH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 WSDSRKPVILEVTPGGFDQINPATNRVLCSYDYRNIEGFVDLSDYQGGFCILYGGFSRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 WSDSRKPVILEVTPGGFDQINPATNRVLCSYDYRNIEGFVDLSDYQGGFCILYGGFSRLH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA0 LFASEQREEIIKSAIDHAGNYIGISLRIRKEPLEFEQYLNLRFGKYSTDESITSLAEFVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LFASEQREEIIKSAIDHAGNYIGISLRIRKEPLEFEQYLNLRFGKYSTDESITSLAEFVV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA0 QKISPRHSEPVKRVLALTETCLVERDPATYNIATLKPLGEVFALVCDSENPQLFTIEFIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 QKISPRHSEPVKRVLALTETCLVERDPATYNIATLKPLGEVFALVCDSENPQLFTIEFIK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA0 GQVRKYSSTERDSLLASLLDGVRASGNRDVCVKMTPTHKGQRWGLLSMPVDEEVESLHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GQVRKYSSTERDSLLASLLDGVRASGNRDVCVKMTPTHKGQRWGLLSMPVDEEVESLHLR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA0 FLATPPNGNFADAVFRFNANISYSGVLHAVTQDGLFSENKEKLINNAITALLSQEGDVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 FLATPPNGNFADAVFRFNANISYSGVLHAVTQDGLFSENKEKLINNAITALLSQEGDVVA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA0 SNAELESQFQAVRRLVASKAGFLAFTQLPKFRERLGVKVVKALKRSNNGIIHAAVEMLCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: CCDS33 SNAELESQFQAVRRLVASKAGFLAFTQLPKFRERLGVKVVKALKRSNNGIIHAAVDMLCA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA0 LMCPMHDDYDLRQEQLNKASLLSSKKFLENLLEKFNSHVDHGTGALVISSLLDFLTFALC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LMCPMHDDYDLRQEQLNKASLLSSKKFLENLLEKFNSHVDHGTGALVISSLLDFLTFALC 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA0 APYSETTEGQQFDMLLEMVASNGRTLFKLFQHPSMAIIKGAGLVMKAIIEEGDKEIATKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 APYSETTEGQQFDMLLEMVASNGRTLFKLFQHPSMAIIKGAGLVMKAIIEEGDKEIATKM 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA0 QELALSEGALPRHLHTAMFTISSDQRMLTNRQLSRHLVGLWTADNATATNLLKRILPPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 QELALSEGALPRHLHTAMFTISSDQRMLTNRQLSRHLVGLWTADNATATNLLKRILPPGL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA0 LAYLESSDLVPEKDADRMHVRDNVKIAMDQYGKFNKVPEWQRLAGKAAKEVEKFAKEKVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LAYLESSDLVPEKDADRMHVRDNVKIAMDQYGKFNKVPEWQRLAGKAAKEVEKFAKEKVD 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA0 LVLMHWRDRMGIAQKENINQKPVVLRKRRQRIKIEANWDLFYYRFGQDHARSNLIWNFKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LVLMHWRDRMGIAQKENINQKPVVLRKRRQRIKIEANWDLFYYRFGQDHARSNLIWNFKT 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA0 REELKDTLESEMRAFNIDRELGSANVISWNHHEFEVKYECLAEEIKIGDYYLRLLLEEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 REELKDTLESEMRAFNIDRELGSANVISWNHHEFEVKYECLAEEIKIGDYYLRLLLEEDE 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA0 NEESGSIKRSYEFFNELYHRFLLTPKVNMKCLCLQALAIVYGRCHEEIGPFTDTRYIIGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 NEESGSIKRSYEFFNELYHRFLLTPKVNMKCLCLQALAIVYGRCHEEIGPFTDTRYIIGM 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA0 LERCTDKLERDRLILFLNKLILNKKNVKDLMDSNGIRILVDLLTLAHLHVSRATVPLQSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LERCTDKLERDRLILFLNKLILNKKNVKDLMDSNGIRILVDLLTLAHLHVSRATVPLQSN 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KA0 VIEAAPDMKRESEKEWYFGNADKERSGPYGFHEMQELWTKGMLNAKTRCWAQGMDGWRPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 VIEAAPDMKRESEKEWYFGNADKERSGPYGFHEMQELWTKGMLNAKTRCWAQGMDGWRPL 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KA0 QSIPQLKWCLLASGQAVLNETDLATLILNMLITMCGYFPSRDQDNAIIRPLPKVKRLLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 QSIPQLKWCLLASGQAVLNETDLATLILNMLITMCGYFPSRDQDNAIIRPLPKVKRLLSD 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KA0 STCLPHIIQLLLTFDPILVEKVAILLYHIMQDNPQLPRLYLSGVFFFIMMYTGSNVLPVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 STCLPHIIQLLLTFDPILVEKVAILLYHIMQDNPQLPRLYLSGVFFFIMMYTGSNVLPVA 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KA0 RFLKYTHTKQAFKSEETKGQDIFQRSILGHILPEAMVCYLENYEPEKFSEIFLGEFDTPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 RFLKYTHTKQAFKSEETKGQDIFQRSILGHILPEAMVCYLENYEPEKFSEIFLGEFDTPE 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KA0 AIWSSEMRRLMIEKIAAHLADFTPRLHSNTRALYQYCPIPIINYPQLENELFCNIYYLKQ ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: CCDS33 AIWSSEMRRLMIEKIAAHLADFTPRLQSNTRALYQYCPIPIINYPQLENELFCNIYYLKQ 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KA0 LCDTLRFPDWPIKDPVKLLKDTLDAWKKEVEKKPPMMSIDDAYEVLNLPQGQGPHDESKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LCDTLRFPDWPIKDPVKLLKDTLDAWKKEVEKKPPMMSIDDAYEVLNLPQGQGPHDESKI 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KA0 RKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFLCTKSAKIVDGPDPENIILILKTQSILF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 RKAYFRLAQKYHPDKNPEGRDMFEKVNKAYEFLCTKSAKIVDGPDPENIILILKTQSILF 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KA0 NRHKEDLQPYKYAGYPMLIRTITMETSDDLLFSKESPLLPAATELAFHTVNCSALNAEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 NRHKEDLQPYKYAGYPMLIRTITMETSDDLLFSKESPLLPAATELAFHTVNCSALNAEEL 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 pF1KA0 RRENGLEVLQEAFSRCVAVLTRSSKPSDMSVQVCGYISKCYSVAAQFEECREKITEMPSI ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: CCDS33 RRENGLEVLQEAFSRCVAVLTRASKPSDMSVQVCGYISKCYSVAAQFEECREKITEMPSI 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 pF1KA0 IKDLCRVLYFGKSIPRVAALGVECVSSFAVDFWLQTHLFQAGILWYLLGFLFNYDYTLEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 IKDLCRVLYFGKSIPRVAALGVECVSSFAVDFWLQTHLFQAGILWYLLGFLFNYDYTLEE 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 pF1KA0 SGIQKSEETNQQEVANSLAKLSVHALSRLGGYLAEEQATPENPTIRKSLAGMLTPYVARK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 SGIQKSEETNQQEVANSLAKLSVHALSRLGGYLAEEQATPENPTIRKSLAGMLTPYVARK 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 pF1KA0 LAVASVTEILKMLNSNTESPYLIWNNSTRAELLEFLESQQENMIKKGDCDKTYGSEFVYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LAVASVTEILKMLNSNTESPYLIWNNSTRAELLEFLESQQENMIKKGDCDKTYGSEFVYS 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 pF1KA0 DHAKELIVGEIFVRVYNEVPTFQLEVPKAFAASLLDYIGSQAQYLHTFMAITHAAKVESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 DHAKELIVGEIFVRVYNEVPTFQLEVPKAFAASLLDYIGSQAQYLHTFMAITHAAKVESE 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 pF1KA0 QHGDRLPRVEMALEALRNVIKYNPGSESECIGHFKLIFSLLRVHGAGQVQQLALEVVNIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 QHGDRLPRVEMALEALRNVIKYNPGSESECIGHFKLIFSLLRVHGAGQVQQLALEVVNIV 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 pF1KA0 TSNQDCVNNIAESMVLSSLLALLHSLPSSRQLVLETLYALTSSTKIIKEAMAKGALIYLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 TSNQDCVNNIAESMVLSSLLALLHSLPSSRQLVLETLYALTSSTKIIKEAMAKGALIYLL 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 pF1KA0 DMFCNSTHPQVRAQTAELFAKMTADKLIGPKVRITLMKFLPSVFMDAMRDNPEAAVHIFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 DMFCNSTHPQVRAQTAELFAKMTADKLIGPKVRITLMKFLPSVFMDAMRDNPEAAVHIFE 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 pF1KA0 GTHENPELIWNDNSRDKVSTTVREMMLEHFKNQQDNPEANWKLPEDFAVVFGEAEGELAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GTHENPELIWNDNSRDKVSTTVREMMLEHFKNQQDNPEANWKLPEDFAVVFGEAEGELAV 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 pF1KA0 GGVFLRIFIAQPAWVLRKPREFLIALLEKLTELLEKNNPHGETLETLTMATVCLFSAQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GGVFLRIFIAQPAWVLRKPREFLIALLEKLTELLEKNNPHGETLETLTMATVCLFSAQPQ 1990 2000 2010 2020 2030 2040 2050 2060 2070 2080 2090 2100 pF1KA0 LADQVPPLGHLPKVIQAMNHRNNAIPKSAIRVIHALSENELCVRAMASLETIGPLMNGMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LADQVPPLGHLPKVIQAMNHRNNAIPKSAIRVIHALSENELCVRAMASLETIGPLMNGMK 2050 2060 2070 2080 2090 2100 2110 2120 2130 2140 2150 2160 pF1KA0 KRADTVGLACEAINRMFQKEQSELVAQALKADLVPYLLKLLEGIGLENLDSPAATKAQIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KRADTVGLACEAINRMFQKEQSELVAQALKADLVPYLLKLLEGIGLENLDSPAATKAQIV 2110 2120 2130 2140 2150 2160 2170 2180 2190 2200 2210 2220 pF1KA0 KALKAMTRSLQYGEQVNEILCRSSVWSAFKDQKHDLFISESQTAGYLTGPGVAGYLTAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KALKAMTRSLQYGEQVNEILCRSSVWSAFKDQKHDLFISESQTAGYLTGPGVAGYLTAGT 2170 2180 2190 2200 2210 2220 2230 2240 pF1KA0 STSVMSNLPPPVDHEAGDLGYQT ::::::::::::::::::::::: CCDS33 STSVMSNLPPPVDHEAGDLGYQT 2230 2240 2243 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 21:08:33 2016 done: Sat Nov 5 21:08:34 2016 Total Scan time: 6.170 Total Display time: 0.250 Function used was FASTA [36.3.4 Apr, 2011]