Result of FASTA (omim) for
pF1KA0756
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0756, 1169 aa
1>>>pF1KA0756 1169 - 1169 aa - 1169 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3433+/-0.000613; mu= 13.5336+/- 0.038
mean_var=332.3979+/-70.723, 0's: 0 Z-trim(115.0): 689 B-trim: 10 in 1/49
Lambda= 0.070347
statistics sampled from 24390 (25252) to 24390 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.296), width: 16
Scan time: 16.350
The best scores are: opt bits E(85289)
NP_055905 (OMIM: 609145) neurofascin isoform 4 pre (1169) 7972 825.4 0
XP_005245049 (OMIM: 609145) PREDICTED: neurofascin (1246) 7972 825.4 0
XP_016856228 (OMIM: 609145) PREDICTED: neurofascin (1271) 7972 825.5 0
NP_001153804 (OMIM: 609145) neurofascin isoform 3 (1174) 7952 823.4 0
XP_005245048 (OMIM: 609145) PREDICTED: neurofascin (1251) 7952 823.4 0
XP_016856227 (OMIM: 609145) PREDICTED: neurofascin (1276) 7952 823.4 0
XP_016856225 (OMIM: 609145) PREDICTED: neurofascin (1180) 7930 821.1 0
XP_016856222 (OMIM: 609145) PREDICTED: neurofascin (1420) 7024 729.3 4e-209
XP_011507615 (OMIM: 609145) PREDICTED: neurofascin (1349) 7002 727.1 1.8e-208
XP_005245050 (OMIM: 609145) PREDICTED: neurofascin (1234) 6236 649.3 4.4e-185
XP_016856229 (OMIM: 609145) PREDICTED: neurofascin (1164) 5698 594.6 1.2e-168
XP_011507617 (OMIM: 609145) PREDICTED: neurofascin (1332) 5308 555.1 1e-156
XP_016856223 (OMIM: 609145) PREDICTED: neurofascin (1403) 5308 555.2 1.1e-156
NP_001153803 (OMIM: 609145) neurofascin isoform 2 (1189) 4265 449.2 7.1e-125
XP_005245046 (OMIM: 609145) PREDICTED: neurofascin (1266) 4265 449.2 7.4e-125
XP_011507614 (OMIM: 609145) PREDICTED: neurofascin (1435) 4265 449.3 7.8e-125
XP_011507620 (OMIM: 609145) PREDICTED: neurofascin (1460) 4265 449.3 7.9e-125
XP_011507629 (OMIM: 609145) PREDICTED: neurofascin (1083) 4243 446.9 3.2e-124
XP_011507628 (OMIM: 609145) PREDICTED: neurofascin (1088) 4243 446.9 3.2e-124
XP_016856226 (OMIM: 609145) PREDICTED: neurofascin (1133) 4243 446.9 3.3e-124
XP_011507627 (OMIM: 609145) PREDICTED: neurofascin (1190) 4243 447.0 3.3e-124
XP_011507626 (OMIM: 609145) PREDICTED: neurofascin (1195) 4243 447.0 3.4e-124
XP_011507625 (OMIM: 609145) PREDICTED: neurofascin (1257) 4243 447.0 3.4e-124
XP_011507624 (OMIM: 609145) PREDICTED: neurofascin (1274) 4243 447.0 3.5e-124
XP_016856224 (OMIM: 609145) PREDICTED: neurofascin (1280) 4243 447.0 3.5e-124
XP_011507623 (OMIM: 609145) PREDICTED: neurofascin (1285) 4243 447.0 3.5e-124
XP_011507619 (OMIM: 609145) PREDICTED: neurofascin (1313) 4243 447.0 3.5e-124
XP_011507613 (OMIM: 609145) PREDICTED: neurofascin (1359) 4243 447.1 3.6e-124
XP_011507618 (OMIM: 609145) PREDICTED: neurofascin (1364) 4243 447.1 3.6e-124
XP_011507616 (OMIM: 609145) PREDICTED: neurofascin (1418) 4237 446.5 5.6e-124
XP_011507622 (OMIM: 609145) PREDICTED: neurofascin (1443) 4237 446.5 5.6e-124
XP_011507621 (OMIM: 609145) PREDICTED: neurofascin (1347) 4215 444.2 2.6e-123
NP_005001 (OMIM: 601581) neuronal cell adhesion mo (1183) 4185 441.1 2e-122
XP_016867743 (OMIM: 601581) PREDICTED: neuronal ce (1189) 4163 438.8 9.3e-122
XP_011514573 (OMIM: 601581) PREDICTED: neuronal ce (1186) 3858 407.9 1.9e-112
XP_016867748 (OMIM: 601581) PREDICTED: neuronal ce (1115) 3848 406.8 3.8e-112
XP_016867741 (OMIM: 601581) PREDICTED: neuronal ce (1192) 3836 405.7 9.1e-112
XP_016867740 (OMIM: 601581) PREDICTED: neuronal ce (1193) 3832 405.3 1.2e-111
XP_016867747 (OMIM: 601581) PREDICTED: neuronal ce (1121) 3826 404.6 1.8e-111
XP_016867737 (OMIM: 601581) PREDICTED: neuronal ce (1196) 3810 403.0 5.7e-111
XP_011514563 (OMIM: 601581) PREDICTED: neuronal ce (1295) 3533 375.0 1.7e-102
XP_016867735 (OMIM: 601581) PREDICTED: neuronal ce (1205) 3516 373.2 5.5e-102
XP_016867725 (OMIM: 601581) PREDICTED: neuronal ce (1298) 3516 373.2 5.7e-102
XP_011514561 (OMIM: 601581) PREDICTED: neuronal ce (1301) 3511 372.7 8.1e-102
NP_001240317 (OMIM: 607416) neural cell adhesion m (1171) 2947 315.4 1.3e-84
XP_016861061 (OMIM: 607416) PREDICTED: neural cell (1171) 2947 315.4 1.3e-84
XP_011531598 (OMIM: 607416) PREDICTED: neural cell (1171) 2947 315.4 1.3e-84
XP_016861062 (OMIM: 607416) PREDICTED: neural cell (1171) 2947 315.4 1.3e-84
XP_016856230 (OMIM: 609145) PREDICTED: neurofascin ( 977) 2805 300.9 2.6e-80
NP_001153805 (OMIM: 609145) neurofascin isoform 6 ( 613) 2554 275.1 9.5e-73
>>NP_055905 (OMIM: 609145) neurofascin isoform 4 precurs (1169 aa)
initn: 7972 init1: 7972 opt: 7972 Z-score: 4396.2 bits: 825.4 E(85289): 0
Smith-Waterman score: 7972; 100.0% identity (100.0% similar) in 1169 aa overlap (1-1169:1-1169)
10 20 30 40 50 60
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMDLTQPPTITKQSAKDHIVDPRDNILIECEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MARQPPPPWVHAAFLLCLLSLGGAIEIPMDLTQPPTITKQSAKDHIVDPRDNILIECEAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 ALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 HPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 TSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 YTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 YTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 FEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 APPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 APPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 QWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNY
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 KLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 YTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 YTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 APPNEAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 APPNEAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGP
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 EDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQ
1090 1100 1110 1120 1130 1140
1150 1160
pF1KA0 YTVKKDKEETEGNESSEATSPVNAIYSLA
:::::::::::::::::::::::::::::
NP_055 YTVKKDKEETEGNESSEATSPVNAIYSLA
1150 1160
>>XP_005245049 (OMIM: 609145) PREDICTED: neurofascin iso (1246 aa)
initn: 7972 init1: 7972 opt: 7972 Z-score: 4395.9 bits: 825.4 E(85289): 0
Smith-Waterman score: 7972; 100.0% identity (100.0% similar) in 1169 aa overlap (1-1169:78-1246)
10 20 30
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMD
::::::::::::::::::::::::::::::
XP_005 LSAVQEAQLKRLEVTRPRVLGSREQGQVPRMARQPPPPWVHAAFLLCLLSLGGAIEIPMD
50 60 70 80 90 100
40 50 60 70 80 90
pF1KA0 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
110 120 130 140 150 160
100 110 120 130 140 150
pF1KA0 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
170 180 190 200 210 220
160 170 180 190 200 210
pF1KA0 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
230 240 250 260 270 280
220 230 240 250 260 270
pF1KA0 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
290 300 310 320 330 340
280 290 300 310 320 330
pF1KA0 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
350 360 370 380 390 400
340 350 360 370 380 390
pF1KA0 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
410 420 430 440 450 460
400 410 420 430 440 450
pF1KA0 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
470 480 490 500 510 520
460 470 480 490 500 510
pF1KA0 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
530 540 550 560 570 580
520 530 540 550 560 570
pF1KA0 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
590 600 610 620 630 640
580 590 600 610 620 630
pF1KA0 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
650 660 670 680 690 700
640 650 660 670 680 690
pF1KA0 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
710 720 730 740 750 760
700 710 720 730 740 750
pF1KA0 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
770 780 790 800 810 820
760 770 780 790 800 810
pF1KA0 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
830 840 850 860 870 880
820 830 840 850 860 870
pF1KA0 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
890 900 910 920 930 940
880 890 900 910 920 930
pF1KA0 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
950 960 970 980 990 1000
940 950 960 970 980 990
pF1KA0 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
1010 1020 1030 1040 1050 1060
1000 1010 1020 1030 1040 1050
pF1KA0 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEAYTNNQADIATQGWFIGLMCAIALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEAYTNNQADIATQGWFIGLMCAIALL
1070 1080 1090 1100 1110 1120
1060 1070 1080 1090 1100 1110
pF1KA0 VLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGT
1130 1140 1150 1160 1170 1180
1120 1130 1140 1150 1160
pF1KA0 IKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
1190 1200 1210 1220 1230 1240
>>XP_016856228 (OMIM: 609145) PREDICTED: neurofascin iso (1271 aa)
initn: 7972 init1: 7972 opt: 7972 Z-score: 4395.9 bits: 825.5 E(85289): 0
Smith-Waterman score: 7972; 100.0% identity (100.0% similar) in 1169 aa overlap (1-1169:103-1271)
10 20 30
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMD
::::::::::::::::::::::::::::::
XP_016 LSAVQEAQLKRLEVTRPRVLGSREQGQVPRMARQPPPPWVHAAFLLCLLSLGGAIEIPMD
80 90 100 110 120 130
40 50 60 70 80 90
pF1KA0 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
140 150 160 170 180 190
100 110 120 130 140 150
pF1KA0 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
200 210 220 230 240 250
160 170 180 190 200 210
pF1KA0 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
260 270 280 290 300 310
220 230 240 250 260 270
pF1KA0 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
320 330 340 350 360 370
280 290 300 310 320 330
pF1KA0 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
380 390 400 410 420 430
340 350 360 370 380 390
pF1KA0 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
440 450 460 470 480 490
400 410 420 430 440 450
pF1KA0 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
500 510 520 530 540 550
460 470 480 490 500 510
pF1KA0 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
560 570 580 590 600 610
520 530 540 550 560 570
pF1KA0 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
620 630 640 650 660 670
580 590 600 610 620 630
pF1KA0 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
680 690 700 710 720 730
640 650 660 670 680 690
pF1KA0 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
740 750 760 770 780 790
700 710 720 730 740 750
pF1KA0 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
800 810 820 830 840 850
760 770 780 790 800 810
pF1KA0 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
860 870 880 890 900 910
820 830 840 850 860 870
pF1KA0 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
920 930 940 950 960 970
880 890 900 910 920 930
pF1KA0 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
980 990 1000 1010 1020 1030
940 950 960 970 980 990
pF1KA0 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
1040 1050 1060 1070 1080 1090
1000 1010 1020 1030 1040 1050
pF1KA0 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEAYTNNQADIATQGWFIGLMCAIALL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEAYTNNQADIATQGWFIGLMCAIALL
1100 1110 1120 1130 1140 1150
1060 1070 1080 1090 1100 1110
pF1KA0 VLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGT
1160 1170 1180 1190 1200 1210
1120 1130 1140 1150 1160
pF1KA0 IKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
1220 1230 1240 1250 1260 1270
>>NP_001153804 (OMIM: 609145) neurofascin isoform 3 prec (1174 aa)
initn: 7024 init1: 7024 opt: 7952 Z-score: 4385.2 bits: 823.4 E(85289): 0
Smith-Waterman score: 7952; 99.6% identity (99.6% similar) in 1174 aa overlap (1-1169:1-1174)
10 20 30 40 50 60
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMDLTQPPTITKQSAKDHIVDPRDNILIECEAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARQPPPPWVHAAFLLCLLSLGGAIEIPMDLTQPPTITKQSAKDHIVDPRDNILIECEAK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 ALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 HPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 TSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 YTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVVQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 FEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSG
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 APPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNNVTVWGS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 QWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNY
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 KLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIMIG
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 YTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070
pF1KA0 APPNEA-----YTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKD
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APPNEATPTAAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKD
1030 1040 1050 1060 1070 1080
1080 1090 1100 1110 1120 1130
pF1KA0 VPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDG
1090 1100 1110 1120 1130 1140
1140 1150 1160
pF1KA0 SFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
::::::::::::::::::::::::::::::::::
NP_001 SFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
1150 1160 1170
>>XP_005245048 (OMIM: 609145) PREDICTED: neurofascin iso (1251 aa)
initn: 7024 init1: 7024 opt: 7952 Z-score: 4385.0 bits: 823.4 E(85289): 0
Smith-Waterman score: 7952; 99.6% identity (99.6% similar) in 1174 aa overlap (1-1169:78-1251)
10 20 30
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMD
::::::::::::::::::::::::::::::
XP_005 LSAVQEAQLKRLEVTRPRVLGSREQGQVPRMARQPPPPWVHAAFLLCLLSLGGAIEIPMD
50 60 70 80 90 100
40 50 60 70 80 90
pF1KA0 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
110 120 130 140 150 160
100 110 120 130 140 150
pF1KA0 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
170 180 190 200 210 220
160 170 180 190 200 210
pF1KA0 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
230 240 250 260 270 280
220 230 240 250 260 270
pF1KA0 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
290 300 310 320 330 340
280 290 300 310 320 330
pF1KA0 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
350 360 370 380 390 400
340 350 360 370 380 390
pF1KA0 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
410 420 430 440 450 460
400 410 420 430 440 450
pF1KA0 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
470 480 490 500 510 520
460 470 480 490 500 510
pF1KA0 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
530 540 550 560 570 580
520 530 540 550 560 570
pF1KA0 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
590 600 610 620 630 640
580 590 600 610 620 630
pF1KA0 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
650 660 670 680 690 700
640 650 660 670 680 690
pF1KA0 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
710 720 730 740 750 760
700 710 720 730 740 750
pF1KA0 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
770 780 790 800 810 820
760 770 780 790 800 810
pF1KA0 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
830 840 850 860 870 880
820 830 840 850 860 870
pF1KA0 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
890 900 910 920 930 940
880 890 900 910 920 930
pF1KA0 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
950 960 970 980 990 1000
940 950 960 970 980 990
pF1KA0 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
1010 1020 1030 1040 1050 1060
1000 1010 1020 1030 1040
pF1KA0 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEA-----YTNNQADIATQGWFIGLMC
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::
XP_005 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAYTNNQADIATQGWFIGLMC
1070 1080 1090 1100 1110 1120
1050 1060 1070 1080 1090 1100
pF1KA0 AIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQT
1130 1140 1150 1160 1170 1180
1110 1120 1130 1140 1150 1160
pF1KA0 SLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAI
1190 1200 1210 1220 1230 1240
pF1KA0 YSLA
::::
XP_005 YSLA
1250
>>XP_016856227 (OMIM: 609145) PREDICTED: neurofascin iso (1276 aa)
initn: 7024 init1: 7024 opt: 7952 Z-score: 4384.9 bits: 823.4 E(85289): 0
Smith-Waterman score: 7952; 99.6% identity (99.6% similar) in 1174 aa overlap (1-1169:103-1276)
10 20 30
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMD
::::::::::::::::::::::::::::::
XP_016 LSAVQEAQLKRLEVTRPRVLGSREQGQVPRMARQPPPPWVHAAFLLCLLSLGGAIEIPMD
80 90 100 110 120 130
40 50 60 70 80 90
pF1KA0 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
140 150 160 170 180 190
100 110 120 130 140 150
pF1KA0 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
200 210 220 230 240 250
160 170 180 190 200 210
pF1KA0 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
260 270 280 290 300 310
220 230 240 250 260 270
pF1KA0 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
320 330 340 350 360 370
280 290 300 310 320 330
pF1KA0 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
380 390 400 410 420 430
340 350 360 370 380 390
pF1KA0 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
440 450 460 470 480 490
400 410 420 430 440 450
pF1KA0 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
500 510 520 530 540 550
460 470 480 490 500 510
pF1KA0 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
560 570 580 590 600 610
520 530 540 550 560 570
pF1KA0 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
620 630 640 650 660 670
580 590 600 610 620 630
pF1KA0 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
680 690 700 710 720 730
640 650 660 670 680 690
pF1KA0 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
740 750 760 770 780 790
700 710 720 730 740 750
pF1KA0 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
800 810 820 830 840 850
760 770 780 790 800 810
pF1KA0 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
860 870 880 890 900 910
820 830 840 850 860 870
pF1KA0 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
920 930 940 950 960 970
880 890 900 910 920 930
pF1KA0 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
980 990 1000 1010 1020 1030
940 950 960 970 980 990
pF1KA0 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
1040 1050 1060 1070 1080 1090
1000 1010 1020 1030 1040
pF1KA0 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEA-----YTNNQADIATQGWFIGLMC
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::
XP_016 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAYTNNQADIATQGWFIGLMC
1100 1110 1120 1130 1140 1150
1050 1060 1070 1080 1090 1100
pF1KA0 AIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQT
1160 1170 1180 1190 1200 1210
1110 1120 1130 1140 1150 1160
pF1KA0 SLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAI
1220 1230 1240 1250 1260 1270
pF1KA0 YSLA
::::
XP_016 YSLA
>>XP_016856225 (OMIM: 609145) PREDICTED: neurofascin iso (1180 aa)
initn: 6809 init1: 6809 opt: 7930 Z-score: 4373.1 bits: 821.1 E(85289): 0
Smith-Waterman score: 7930; 99.1% identity (99.1% similar) in 1180 aa overlap (1-1169:1-1180)
10 20 30 40 50
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMD------LTQPPTITKQSAKDHIVDPRDNIL
:::::::::::::::::::::::::::::: ::::::::::::::::::::::::
XP_016 MARQPPPPWVHAAFLLCLLSLGGAIEIPMDPSIQNELTQPPTITKQSAKDHIVDPRDNIL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA0 DSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA0 GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA0 KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA0 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLR
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA0 WFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTR
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA0 IYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVA
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA0 ERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA0 TDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSE
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA0 RYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNN
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA0 VTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMN
790 800 810 820 830 840
840 850 860 870 880 890
pF1KA0 STAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRL
850 860 870 880 890 900
900 910 920 930 940 950
pF1KA0 FPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHP
910 920 930 940 950 960
960 970 980 990 1000 1010
pF1KA0 NGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEA
970 980 990 1000 1010 1020
1020 1030 1040 1050 1060
pF1KA0 VTEESPAPPNEA-----YTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYP
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::
XP_016 VTEESPAPPNEATPTAAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYP
1030 1040 1050 1060 1070 1080
1070 1080 1090 1100 1110 1120
pF1KA0 VREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEG
1090 1100 1110 1120 1130 1140
1130 1140 1150 1160
pF1KA0 QFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
::::::::::::::::::::::::::::::::::::::::
XP_016 QFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
1150 1160 1170 1180
>>XP_016856222 (OMIM: 609145) PREDICTED: neurofascin iso (1420 aa)
initn: 7024 init1: 7024 opt: 7024 Z-score: 3875.4 bits: 729.3 E(85289): 4e-209
Smith-Waterman score: 7024; 100.0% identity (100.0% similar) in 1026 aa overlap (1-1026:78-1103)
10 20 30
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMD
::::::::::::::::::::::::::::::
XP_016 LSAVQEAQLKRLEVTRPRVLGSREQGQVPRMARQPPPPWVHAAFLLCLLSLGGAIEIPMD
50 60 70 80 90 100
40 50 60 70 80 90
pF1KA0 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
110 120 130 140 150 160
100 110 120 130 140 150
pF1KA0 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
170 180 190 200 210 220
160 170 180 190 200 210
pF1KA0 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
230 240 250 260 270 280
220 230 240 250 260 270
pF1KA0 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
290 300 310 320 330 340
280 290 300 310 320 330
pF1KA0 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
350 360 370 380 390 400
340 350 360 370 380 390
pF1KA0 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
410 420 430 440 450 460
400 410 420 430 440 450
pF1KA0 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
470 480 490 500 510 520
460 470 480 490 500 510
pF1KA0 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
530 540 550 560 570 580
520 530 540 550 560 570
pF1KA0 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
590 600 610 620 630 640
580 590 600 610 620 630
pF1KA0 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
650 660 670 680 690 700
640 650 660 670 680 690
pF1KA0 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
710 720 730 740 750 760
700 710 720 730 740 750
pF1KA0 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
770 780 790 800 810 820
760 770 780 790 800 810
pF1KA0 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
830 840 850 860 870 880
820 830 840 850 860 870
pF1KA0 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
890 900 910 920 930 940
880 890 900 910 920 930
pF1KA0 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
950 960 970 980 990 1000
940 950 960 970 980 990
pF1KA0 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
1010 1020 1030 1040 1050 1060
1000 1010 1020 1030 1040 1050
pF1KA0 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEAYTNNQADIATQGWFIGLMCAIALL
::::::::::::::::::::::::::::::::::::
XP_016 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAPPTLPPTTVGATGAVSSTD
1070 1080 1090 1100 1110 1120
1060 1070 1080 1090 1100 1110
pF1KA0 VLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGT
XP_016 ATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGTKIHESA
1130 1140 1150 1160 1170 1180
>--
initn: 1001 init1: 953 opt: 999 Z-score: 570.8 bits: 117.9 E(85289): 4.7e-25
Smith-Waterman score: 999; 64.5% identity (75.6% similar) in 262 aa overlap (912-1169:1172-1420)
890 900 910 920 930 940
pF1KA0 FPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVR-QPN
..: . :. :..:. . : ::
XP_016 IIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGTKIHESAPDEQSIWNVTVLPN
1150 1160 1170 1180 1190 1200
950 960 970 980 990
pF1KA0 LETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTD--PVSR
. :. : : :. ....:. : :: . . .: .: :: :
XP_016 SKWANITWKHNFGPG---TDFVVEYIDSNHTKKTVPVKAQAQP------IQLTDLYPGMT
1210 1220 1230 1240 1250
1000 1010 1020 1030 1040 1050
pF1KA0 YRFTLSARTQVG-SGEAVTEESPAPPNEAYTNNQADIATQGWFIGLMCAIALLVLILLIV
: . . .: . : :. ..: . . ::::::::::::::::::::::::::::::::
XP_016 YTLRVYSRDNEGISSTVITFMT----STAYTNNQADIATQGWFIGLMCAIALLVLILLIV
1260 1270 1280 1290 1300
1060 1070 1080 1090 1100 1110
pF1KA0 CFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESD
1310 1320 1330 1340 1350 1360
1120 1130 1140 1150 1160
pF1KA0 DSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
1370 1380 1390 1400 1410 1420
>>XP_011507615 (OMIM: 609145) PREDICTED: neurofascin iso (1349 aa)
initn: 6809 init1: 6809 opt: 7002 Z-score: 3863.6 bits: 727.1 E(85289): 1.8e-208
Smith-Waterman score: 7002; 99.4% identity (99.4% similar) in 1032 aa overlap (1-1026:1-1032)
10 20 30 40 50
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMD------LTQPPTITKQSAKDHIVDPRDNIL
:::::::::::::::::::::::::::::: ::::::::::::::::::::::::
XP_011 MARQPPPPWVHAAFLLCLLSLGGAIEIPMDPSIQNELTQPPTITKQSAKDHIVDPRDNIL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA0 DSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA0 GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA0 KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA0 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLR
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA0 WFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTR
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA0 IYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVA
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA0 ERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDLELTDLAERSVRLTWIPGDANNSPI
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA0 TDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSE
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA0 RYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETREAWNN
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA0 VTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMN
790 800 810 820 830 840
840 850 860 870 880 890
pF1KA0 STAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRL
850 860 870 880 890 900
900 910 920 930 940 950
pF1KA0 FPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHP
910 920 930 940 950 960
960 970 980 990 1000 1010
pF1KA0 NGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTDPVSRYRFTLSARTQVGSGEA
970 980 990 1000 1010 1020
1020 1030 1040 1050 1060 1070
pF1KA0 VTEESPAPPNEAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKK
::::::::::::
XP_011 VTEESPAPPNEATPTAAPPTLPPTTVGATGAVSSTDATAIAATTEATTVPIIPTVAPTTI
1030 1040 1050 1060 1070 1080
>--
initn: 1001 init1: 953 opt: 999 Z-score: 571.0 bits: 117.8 E(85289): 4.6e-25
Smith-Waterman score: 999; 64.5% identity (75.6% similar) in 262 aa overlap (912-1169:1101-1349)
890 900 910 920 930 940
pF1KA0 FPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVR-QPN
..: . :. :..:. . : ::
XP_011 IIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGTKIHESAPDEQSIWNVTVLPN
1080 1090 1100 1110 1120 1130
950 960 970 980 990
pF1KA0 LETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTVQRTD--PVSR
. :. : : :. ....:. : :: . . .: .: :: :
XP_011 SKWANITWKHNFGPG---TDFVVEYIDSNHTKKTVPVKAQAQP------IQLTDLYPGMT
1140 1150 1160 1170 1180
1000 1010 1020 1030 1040 1050
pF1KA0 YRFTLSARTQVG-SGEAVTEESPAPPNEAYTNNQADIATQGWFIGLMCAIALLVLILLIV
: . . .: . : :. ..: . . ::::::::::::::::::::::::::::::::
XP_011 YTLRVYSRDNEGISSTVITFMT----STAYTNNQADIATQGWFIGLMCAIALLVLILLIV
1190 1200 1210 1220 1230
1060 1070 1080 1090 1100 1110
pF1KA0 CFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESD
1240 1250 1260 1270 1280 1290
1120 1130 1140 1150 1160
pF1KA0 DSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
1300 1310 1320 1330 1340
>>XP_005245050 (OMIM: 609145) PREDICTED: neurofascin iso (1234 aa)
initn: 5293 init1: 5293 opt: 6236 Z-score: 3443.8 bits: 649.3 E(85289): 4.4e-185
Smith-Waterman score: 7776; 98.0% identity (98.1% similar) in 1174 aa overlap (1-1169:78-1234)
10 20 30
pF1KA0 MARQPPPPWVHAAFLLCLLSLGGAIEIPMD
::::::::::::::::::::::::::::::
XP_005 LSAVQEAQLKRLEVTRPRVLGSREQGQVPRMARQPPPPWVHAAFLLCLLSLGGAIEIPMD
50 60 70 80 90 100
40 50 60 70 80 90
pF1KA0 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS
110 120 130 140 150 160
100 110 120 130 140 150
pF1KA0 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGA
170 180 190 200 210 220
160 170 180 190 200 210
pF1KA0 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNAR
230 240 250 260 270 280
220 230 240 250 260 270
pF1KA0 FHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVL
:::::::::::::::::::. :::::::::::::::::::::::
XP_005 FHFTHTIQQKNPFTLKVLTT-----------------RGVAERTPSFMYPQGTASSQMVL
290 300 310 320 330
280 290 300 310 320 330
pF1KA0 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
340 350 360 370 380 390
340 350 360 370 380 390
pF1KA0 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQS
400 410 420 430 440 450
400 410 420 430 440 450
pF1KA0 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
460 470 480 490 500 510
460 470 480 490 500 510
pF1KA0 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
520 530 540 550 560 570
520 530 540 550 560 570
pF1KA0 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TCVATNILGKAENQVRLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLK
580 590 600 610 620 630
580 590 600 610 620 630
pF1KA0 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL
640 650 660 670 680 690
640 650 660 670 680 690
pF1KA0 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELTDLAERSVRLTWIPGDANNSPITDYVVQFEEDQFQPGVWHDHSKYPGSVNSAVLRLSP
700 710 720 730 740 750
700 710 720 730 740 750
pF1KA0 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEITWTPMNAT
760 770 780 790 800 810
760 770 780 790 800 810
pF1KA0 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPE
820 830 840 850 860 870
820 830 840 850 860 870
pF1KA0 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKN
880 890 900 910 920 930
880 890 900 910 920 930
pF1KA0 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA
940 950 960 970 980 990
940 950 960 970 980 990
pF1KA0 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRRFRVRQPNLETINLEWDHPEHPNGIMIGYTLKYVAFNGTKVGKQIVENFSPNQTKFTV
1000 1010 1020 1030 1040 1050
1000 1010 1020 1030 1040
pF1KA0 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEA-----YTNNQADIATQGWFIGLMC
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::
XP_005 QRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAYTNNQADIATQGWFIGLMC
1060 1070 1080 1090 1100 1110
1050 1060 1070 1080 1090 1100
pF1KA0 AIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQT
1120 1130 1140 1150 1160 1170
1110 1120 1130 1140 1150 1160
pF1KA0 SLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAI
1180 1190 1200 1210 1220 1230
pF1KA0 YSLA
::::
XP_005 YSLA
1169 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:17:51 2016 done: Thu Nov 3 10:17:53 2016
Total Scan time: 16.350 Total Display time: 0.560
Function used was FASTA [36.3.4 Apr, 2011]