FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA0847, 1244 aa 1>>>pF1KA0847 1244 - 1244 aa - 1244 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.5335+/-0.00115; mu= -4.3241+/- 0.069 mean_var=455.5870+/-98.781, 0's: 0 Z-trim(112.8): 128 B-trim: 0 in 0/54 Lambda= 0.060088 statistics sampled from 13392 (13485) to 13392 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.73), E-opt: 0.2 (0.414), width: 16 Scan time: 5.540 The best scores are: opt bits E(32554) CCDS42029.1 TTBK2 gene_id:146057|Hs108|chr15 (1244) 8289 734.5 4e-211 CCDS34455.1 TTBK1 gene_id:84630|Hs108|chr6 (1321) 2119 199.6 4.3e-50 >>CCDS42029.1 TTBK2 gene_id:146057|Hs108|chr15 (1244 aa) initn: 8289 init1: 8289 opt: 8289 Z-score: 3903.8 bits: 734.5 E(32554): 4e-211 Smith-Waterman score: 8289; 99.9% identity (99.9% similar) in 1244 aa overlap (1-1244:1-1244) 10 20 30 40 50 60 pF1KA0 MSGGGEQPDILSVGILVKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQV ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MSGGGEQLDILSVGILVKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 LKMEVAVLKKLQGKDHVCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LKMEVAVLKKLQGKDHVCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 LGRQILESIESIHSVGFLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVRPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 LGRQILESIESIHSVGFLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVRPP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA0 RAVAGFRGTVRYASINAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIKDKEQVGSIKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RAVAGFRGTVRYASINAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIKDKEQVGSIKE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA0 RYDHRLMLKHLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDWEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RYDHRLMLKHLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDWEKT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA0 GNDGSLTTTTTSTTPQLHTRLTPAAIGIANATPIPGDLLRENTDEVFPDEQLSDGENGIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GNDGSLTTTTTSTTPQLHTRLTPAAIGIANATPIPGDLLRENTDEVFPDEQLSDGENGIP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA0 VGVSPDKLPGSLGHPRPQEKDVWEEMDANKNKIKLGICKAATEEENSHGQANGLLNAPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 VGVSPDKLPGSLGHPRPQEKDVWEEMDANKNKIKLGICKAATEEENSHGQANGLLNAPSL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA0 GSPIRVRSEITQPDRDIPLVRKLRSIHSFELEKRLTLEPKPDTDKFLETCLEKMQKDTSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GSPIRVRSEITQPDRDIPLVRKLRSIHSFELEKRLTLEPKPDTDKFLETCLEKMQKDTSA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA0 GKESILPALLHKPCVPAVSRTDHIWHYDEEYLPDASKPASANTPEQADGGGSNGFIAVNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GKESILPALLHKPCVPAVSRTDHIWHYDEEYLPDASKPASANTPEQADGGGSNGFIAVNL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA0 SSCKQEIDSKEWVIVDKEQDLQDFRTNEAVGHKTTGSPSDEEPEVLQVLEASPQDEKLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SSCKQEIDSKEWVIVDKEQDLQDFRTNEAVGHKTTGSPSDEEPEVLQVLEASPQDEKLQL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA0 GPWAENDHLKKETSGVVLALSAEGPPTAASEQYTDRLELQPGAASQFIAATPTSLMEAQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 GPWAENDHLKKETSGVVLALSAEGPPTAASEQYTDRLELQPGAASQFIAATPTSLMEAQA 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA0 EGPLTAITIPRPSVASTQSTSGSFHCGQQPEKKDLQPMEPTVELYSPRENFSGLVVTEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EGPLTAITIPRPSVASTQSTSGSFHCGQQPEKKDLQPMEPTVELYSPRENFSGLVVTEGE 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA0 PPSGGSRTDLGLQIDHIGHDMLPNIRESNKSQDLGPKELPDHNRLVVREFENLPGETEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PPSGGSRTDLGLQIDHIGHDMLPNIRESNKSQDLGPKELPDHNRLVVREFENLPGETEEK 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA0 SILLESDNEDEKLSRGQHCIEISSLPGDLVIVEKDHSATTEPLDVTKTQTFSVVPNQDKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SILLESDNEDEKLSRGQHCIEISSLPGDLVIVEKDHSATTEPLDVTKTQTFSVVPNQDKN 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA0 NEIMKLLTVGTSEISSRDIDPHVEGQIGQVAEMQKNKISKDDDIMSEDLPGHQGDLSTFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 NEIMKLLTVGTSEISSRDIDPHVEGQIGQVAEMQKNKISKDDDIMSEDLPGHQGDLSTFL 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA0 HQEGKREKITPRNGELFHCVSENEHGAPTRKDMVRSSFVTRHSRIPVLAQEIDSTLESSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 HQEGKREKITPRNGELFHCVSENEHGAPTRKDMVRSSFVTRHSRIPVLAQEIDSTLESSS 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KA0 PVSAKEKLLQKKAYQPDLVKLLVEKRQFKSFLGDLSSASDKLLEEKLATVPAPFCEEEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PVSAKEKLLQKKAYQPDLVKLLVEKRQFKSFLGDLSSASDKLLEEKLATVPAPFCEEEVL 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KA0 TPFSRLTVDSHLSRSAEDSFLSPIISQSRKSKIPRPVSWVNTDQVNSSTSSQFFPRPPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 TPFSRLTVDSHLSRSAEDSFLSPIISQSRKSKIPRPVSWVNTDQVNSSTSSQFFPRPPPG 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KA0 KPPTRPGVEARLRRYKVLGSSNSDSDLFSRLAQILQNGSQKPRSTTQCKSPGSPHNPKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 KPPTRPGVEARLRRYKVLGSSNSDSDLFSRLAQILQNGSQKPRSTTQCKSPGSPHNPKTP 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KA0 PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSS 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 pF1KA0 RRSCQQEHCKPSKNGLKGSGSLHHHSASTKTPQGKSKPASKLSR :::::::::::::::::::::::::::::::::::::::::::: CCDS42 RRSCQQEHCKPSKNGLKGSGSLHHHSASTKTPQGKSKPASKLSR 1210 1220 1230 1240 >>CCDS34455.1 TTBK1 gene_id:84630|Hs108|chr6 (1321 aa) initn: 2390 init1: 1809 opt: 2119 Z-score: 1012.8 bits: 199.6 E(32554): 4.3e-50 Smith-Waterman score: 2364; 39.6% identity (60.0% similar) in 1336 aa overlap (1-1193:14-1288) 10 20 30 40 pF1KA0 MSGGGEQPDILSVGILVKERWKVLRKIGGGGFGEIYDALDMLTRENV ::::::: ::: .. .::.:::::.:::::::::::.:.:.:::::: CCDS34 MQCLAAALKDETNMSGGGEQADILPANYVVKDRWKVLKKIGGGGFGEIYEAMDLLTRENV 10 20 30 40 50 60 50 60 70 80 90 100 pF1KA0 ALKVESAQQPKQVLKMEVAVLKKLQGKDHVCRFIGCGRNDRFNYVVMQLQGRNLADLRRS :::::::::::::::::::::::::::::::::::::::..::::::::::::::::::: CCDS34 ALKVESAQQPKQVLKMEVAVLKKLQGKDHVCRFIGCGRNEKFNYVVMQLQGRNLADLRRS 70 80 90 100 110 120 110 120 130 140 150 160 pF1KA0 QSRGTFTISTTLRLGRQILESIESIHSVGFLHRDIKPSNFAMGRFPSTCRKCYMLDFGLA : :::::.:::::::.:::::::.::::::::::::::::::::.::: ::::::::::: CCDS34 QPRGTFTLSTTLRLGKQILESIEAIHSVGFLHRDIKPSNFAMGRLPSTYRKCYMLDFGLA 130 140 150 160 170 180 170 180 190 200 210 220 pF1KA0 RQFTNSCGDVRPPRAVAGFRGTVRYASINAHRNREMGRHDDLWSLFYMLVEFVVGQLPWR ::.::. ::::::: ::::::::::::.:::.::::::::::::::::::::.::::::: CCDS34 RQYTNTTGDVRPPRNVAGFRGTVRYASVNAHKNREMGRHDDLWSLFYMLVEFAVGQLPWR 190 200 210 220 230 240 230 240 250 260 270 280 pF1KA0 KIKDKEQVGSIKERYDHRLMLKHLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTF ::::::::: :::.:.::..:::.: :: .:::::.::::::::::::. :::.::.: CCDS34 KIKDKEQVGMIKEKYEHRMLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKER 250 260 270 280 290 300 290 300 310 320 330 340 pF1KA0 GVIESDPFDWEKTGNDGSLTTTTTSTTPQLHTRLTPAAIGIANATPIPGDLLRENTDEVF :. :.. :::::.:.: .: .:.::: :: .:: : : .:..:.::.:::::::::..:. CCDS34 GIAENEAFDWEKAGTD-ALLSTSTSTPPQQNTRQTAAMFGVVNVTPVPGDLLRENTEDVL 310 320 330 340 350 350 360 370 380 390 400 pF1KA0 PDEQLSDGENGIPV-------GVSPDKLPGSLGHPRPQEKDVWEEMDANKNKIKLGICKA :.::: ::. :. :..:. : . :: : .:::: :.:.::....: :. CCDS34 QGEHLSDQENAPPILPGRPSEGLGPS--PHLVPHPGGPEAEVWEETDVNRNKLRINIGKS 360 370 380 390 400 410 410 420 430 440 450 pF1KA0 A-TEEENSHGQANGLLNAPSLGSPIRVRSEITQPDRDIPLVRKLR--SIHSFELEKRLTL .:::.:.: ...:: ::.:. :: ::.:: ..: : : ::. CCDS34 PCVEEEQSRG-----MGVPS--SPVRA-----PPDSPTTPVRSLRYRRVNSPESE-RLST 420 430 440 450 460 460 470 480 490 500 510 pF1KA0 EPKPDTDKFLETCLEKMQKDTSAGKESILPALLHKPCV--PAVSRTDHIWHYDEEYLPDA .: .: .. . : :. : .. : :: . : :.. .. CCDS34 -----ADGRVELPERRSRMDLP-GSPS------RQACSSQPAQMLSVDTGHADRQ--ASG 470 480 490 500 510 520 530 540 550 560 570 pF1KA0 SKPASANTPEQADGGGSNGFIAVNLSSCKQEIDSKEWVIVDKEQDLQDFRTNEAVGHKTT .::.. ..: ::.: .: :. ....:::::::.::: .:.:: . .. .: CCDS34 RMDVSASVEQEA---LSNAFRSVPLAE-EEDFDSKEWVIIDKETELKDFPPG---AEPST 520 530 540 550 560 580 590 600 610 620 pF1KA0 GSPSDEEPEVLQVL-EASPQDEKLQLGP-----------WAEND--HLKKETSGVVLALS .. .::::: :. : : . . ..: : ::.: :: . :. . CCDS34 SGTTDEEPEELRPLPEEGEERRRLGAEPTVRPRGRSMQALAEEDLQHLPPQPLPPQLS-Q 570 580 590 600 610 620 630 640 650 660 pF1KA0 AEG------PPTAASEQYTD--------RLELQP-GAASQ-FIAATPTSLMEAQAEGPLT ..: ::: .: ... : : .: : : : .: : . ::. CCDS34 GDGRSETSQPPTPGSPSHSPLHSGPRPRRRESDPTGPQRQVFSVAPPFEVNGLPRAVPLS 630 640 650 660 670 680 670 680 690 pF1KA0 A-------------------------------ITIPRPSVASTQSTSGSFHCGQQPEKKD .: :. .: .: ... . .. :. . CCDS34 LPYQDFKRDLSDYRERARLLNRVRRVGFSHMLLTTPQVPLAPVQPQANGKEEEEEEEEDE 690 700 710 720 730 740 700 710 720 730 740 750 pF1KA0 LQPMEPTVELYSPRENFSGLVVTEGEPPSGGSRTDLGLQID-HIGHDMLPNIRESNKSQD . : : .:. : : ... . :: . . : . . : ...::. CCDS34 EEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSEGSERSTDRSQE 750 760 770 780 790 800 760 770 780 790 800 pF1KA0 LGPKELPDHNRLVVREFENLPG---ETEE--KSILLESDNEDEKLSRGQHCIEISSLP-- .:. : .. : .. : :: :...: : .. .... :.. : CCDS34 GAPSTLLADDQKESRGRASMADGDLEPEEGSKTLVLVSPGD---MKKSPVTAELAPDPDL 810 820 830 840 850 810 820 830 840 850 pF1KA0 GDLVIVEKDH---SATTEPLDVTKTQTFS-VVPNQDKNNEIMKLLTVGTSEISSRDI--- : :. . .: . : :::.. :.: :. .. : : .:: . . CCDS34 GTLAALTPQHERPQPTGSQLDVSEPGTLSSVLKSEPKPPGPGAGLGAGTVTTGVGGVAVT 860 870 880 890 900 910 860 870 880 890 900 910 pF1KA0 -DP--HVEGQIGQVAEMQK-NKISKDDDIMSEDLPGHQGDLSTFLHQEGKREKITPR--- .: .:: . ..:: . : .:. . . . . :.:. : ..: . : CCDS34 SSPFTKVERTFVHIAEKTHLNVMSSGGQALRSEEFSAGGELGLELASDGGAVEEGARAPL 920 930 940 950 960 970 920 930 940 pF1KA0 -NGELFHCVSENE------HGAP--TRKDMVRSSFVT----------------------- :: . .. : ::: : ..:. .:. . CCDS34 ENGLALSGLNGAEIEGSALSGAPRETPSEMATNSLPNGPALADGPAPVSPLEPSPEKVAT 980 990 1000 1010 1020 1030 950 960 970 980 pF1KA0 ----RH--------SRIPVLAQEIDSTLESSSPVSAKEKLLQKKAYQPDLVKLLVEKRQF :: :::::: .: :. : :. .::::. .. : ::..:..:::: CCDS34 ISPRRHAMPGSRPRSRIPVLLSEEDTGSEPSGSLSAKERWSKRARPQQDLARLVMEKRQG 1040 1050 1060 1070 1080 1090 990 1000 1010 1020 1030 1040 pF1KA0 KSFLGDLSSASDKLLEEKL---ATVPAPFCEEEVLTPFSRLTVDSHLSRSAEDSFLSPII . .: :.::.. ::. :. . ::. :: :. . . : :.. . CCDS34 RLLLRLASGASSSSSEEQRRASETLSGTGSEED--TPASEPA--AALPRKSGRA------ 1100 1110 1120 1130 1140 1050 1060 1070 1080 1090 1100 pF1KA0 SQSRKSKIPRPVSWVNTDQVNSSTSSQFFPRPPPGKPPTRPGVEARLRRYKVLGSSNSDS . .:.::::.. : ...: : . : .. .::. ::... . CCDS34 -AATRSRIPRPIGLRMPMPV---AAQQPASRSHGAAPALDTAITSRLQLQTPPGSATA-A 1150 1160 1170 1180 1190 1200 1110 1120 1130 1140 1150 1160 pF1KA0 DLFSRLAQILQNGSQKPRSTTQCKSPGSPHNPKTPPKSPVVPRRSPSASPRSSSLPRTSS :: : : : :. . . : .:..:. : .. .. :. ::::::.:: : : CCDS34 DL--RPKQPPGRGLGPGRAQAGARPP-APRSPRLPASTSAA--RNASASPRSQSLSRRES 1210 1220 1230 1240 1250 1170 1180 1190 1200 1210 1220 pF1KA0 SSPSRAGRPH-HDQRSSSPHLGRSKSPPSHSGSSSSRRSCQQEHCKPSKNGLKGSGSLHH :::. .:: :. : .. . :: CCDS34 PSPSHQARPGVPPPRGVPPARAQPDGTPSPGGSKKGPRGKLQAQRATTKGRAGGAEGRAG 1260 1270 1280 1290 1300 1310 1244 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 19:49:56 2016 done: Thu Nov 3 19:49:57 2016 Total Scan time: 5.540 Total Display time: 0.140 Function used was FASTA [36.3.4 Apr, 2011]