Result of FASTA (ccds) for
pF1KA0946
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0946, 632 aa
1>>>pF1KA0946 632 - 632 aa - 632 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7821+/-0.00149; mu= 11.5813+/- 0.087
mean_var=149.4921+/-31.848, 0's: 0 Z-trim(103.3): 237 B-trim: 135 in 1/49
Lambda= 0.104898
statistics sampled from 7071 (7363) to 7071 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.574), E-opt: 0.2 (0.226), width: 16
Scan time: 2.320
The best scores are: opt bits E(32554)
CCDS44946.1 ZDHHC17 gene_id:23390|Hs108|chr12 ( 632) 4444 685.7 4.8e-197
CCDS44550.1 ZDHHC13 gene_id:54503|Hs108|chr11 ( 622) 2096 330.4 4.4e-90
CCDS44551.1 ZDHHC13 gene_id:54503|Hs108|chr11 ( 492) 1581 252.4 1.1e-66
>>CCDS44946.1 ZDHHC17 gene_id:23390|Hs108|chr12 (632 aa)
initn: 4444 init1: 4444 opt: 4444 Z-score: 3651.0 bits: 685.7 E(32554): 4.8e-197
Smith-Waterman score: 4444; 100.0% identity (100.0% similar) in 632 aa overlap (1-632:1-632)
10 20 30 40 50 60
pF1KA0 MQREEGFNTKMADGPDEYDTEAGCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MQREEGFNTKMADGPDEYDTEAGCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 ISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 FRQKVMLGTPFLVIWLVGFIADLNIDSWLIKGLMYGGVWATVQFLSKSFFDHSMHSALPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FRQKVMLGTPFLVIWLVGFIADLNIDSWLIKGLMYGGVWATVQFLSKSFFDHSMHSALPL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 GIYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFYNFGKSWKSDPGIIKATEEQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GIYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFYNFGKSWKSDPGIIKATEEQK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 KKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 YFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWTYITQIATCSPWMFWMFLNSVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YFMGYLFFLLFMICWMIYGCISYWGLHCETTYTKDGFWTYITQIATCSPWMFWMFLNSVF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 HFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKVTTTSIESPFNHGCVRNIIDFFEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HFMWVAVLLMCQMYQISCLGITTNERMNARRYKHFKVTTTSIESPFNHGCVRNIIDFFEF
550 560 570 580 590 600
610 620 630
pF1KA0 RCCGLFRPVIVDWTRQYTIEYDQISGSGYQLV
::::::::::::::::::::::::::::::::
CCDS44 RCCGLFRPVIVDWTRQYTIEYDQISGSGYQLV
610 620 630
>>CCDS44550.1 ZDHHC13 gene_id:54503|Hs108|chr11 (622 aa)
initn: 2070 init1: 1025 opt: 2096 Z-score: 1730.7 bits: 330.4 E(32554): 4.4e-90
Smith-Waterman score: 2096; 51.3% identity (77.9% similar) in 571 aa overlap (53-621:45-611)
30 40 50 60 70 80
pF1KA0 GCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYD
:.: :. ::::::::::.:::.::::::::
CCDS44 HGPHPPGFGRYGICAHENKELANAREALPLIEDSSNCDIVKATQYGIFERCKELVEAGYD
20 30 40 50 60 70
90 100 110 120 130 140
pF1KA0 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQ
:::::::::.::::::::::.::::.::::::.:::::::::::::::: ::::: ::.
CCDS44 VRQPDKENVSLLHWAAINNRLDLVKFYISKGAVVDQLGGDLNSTPLHWAIRQGHLPMVIL
80 90 100 110 120 130
150 160 170 180 190 200
pF1KA0 LMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH
:...::::.:::::: : ::::. : : :.::::.:::.:.: : ::.:::: .:...
CCDS44 LLQHGADPTLIDGEGFSSIHLAVLFQHMPIIAYLISKGQSVNMTDVNGQTPLMLSAHKVI
140 150 160 170 180 190
210 220 230 240 250 260
pF1KA0 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESAL
. .:: .:: :: :.:. :: :.:: ::::: :::..... :::::...: ::.:::. :
CCDS44 GPEPTGFLLKFNPSLNVVDKIHQNTPLHWAVAAGNVNAVDKLLEAGSSLDIQNVKGETPL
200 210 220 230 240 250
270 280 290 300 310 320
pF1KA0 DLAKQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIAD
:.: : :: .:. :. . .. .. . : :. . : ..: ...: .:.: :
CCDS44 DMALQNKNQLIIHMLKTEAKMRANQKFRLWRWLQKCELF---LLLMLSVITMWAIGYILD
260 270 280 290 300 310
330 340 350 360 370 380
pF1KA0 LNIDSWLIKGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDL
.: ::::.:: . .. .... . . .. :: .. :.. ::...:::. :. ::
CCDS44 FNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMTWFILFFPDL
320 330 340 350 360 370
390 400 410 420 430 440
pF1KA0 NFLFIHLPFLANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTC
... :. . ::..: : :.: .:::. ::.::.:: .:. ::::::::. ::..:
CCDS44 AGAPFYFSFIFSIVAFLYFFYKTWATDPGFTKASEEEKKVNIITLAETGSLDFRTFCTSC
380 390 400 410 420 430
450 460 470 480 490 500
pF1KA0 LIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMIC-WMIYGCI
:::::.:: :: ::: :.:..:.:: :.: :.: :::.:.. .:::: :.: :.::: .
CCDS44 LIRKPLRSLHCHVCNCCVARYDQHCLWTGRCIGFGNHHYYIFFLFFLS-MVCGWIIYGSF
440 450 460 470 480 490
510 520 530 540 550 560
pF1KA0 SYWGLHCETTYTKDGFWTYITQIATCSPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGI
: . :: ::. .::.:::..::..::::...... ..::: : . ::. :..::. ::.
CCDS44 IYLSSHCATTFKEDGLWTYLNQIVACSPWVLYILMLATFHFSWSTFLLLNQLFQIAFLGL
500 510 520 530 540 550
570 580 590 600 610 620
pF1KA0 TTNERMNARRY-KHFKVTTTSIESPFNHGCVRNIIDFFEFRCCGLFRPVIVDWTRQYTIE
:..::.. .. ::.: : . ..:.: : ..:. :::. : :: .: .:::: :::.
CCDS44 TSHERISLQKQSKHMKQTLSLRKTPYNLGFMQNLADFFQCGCFGLVKPCVVDWTSQYTMV
560 570 580 590 600 610
630
pF1KA0 YDQISGSGYQLV
.
CCDS44 FHPAREKVLRSV
620
>>CCDS44551.1 ZDHHC13 gene_id:54503|Hs108|chr11 (492 aa)
initn: 1568 init1: 861 opt: 1581 Z-score: 1310.8 bits: 252.4 E(32554): 1.1e-66
Smith-Waterman score: 1581; 45.2% identity (74.8% similar) in 485 aa overlap (139-621:1-481)
110 120 130 140 150 160
pF1KA0 YISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG
::. :...::::.:::::: : ::::. :
CCDS44 MVILLLQHGADPTLIDGEGFSSIHLAVLFQ
10 20 30
170 180 190 200 210 220
pF1KA0 HTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTA
: :.::::.:::.:.: : ::.:::: .:... . .:: .:: :: :.:. :: :.::
CCDS44 HMPIIAYLISKGQSVNMTDVNGQTPLMLSAHKVIGPEPTGFLLKFNPSLNVVDKIHQNTP
40 50 60 70 80 90
230 240 250 260 270 280
pF1KA0 LHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGYDN
::::: :::..... :::::...: ::.:::. ::.: : :: .:. :. . .. ..
CCDS44 LHWAVAAGNVNAVDKLLEAGSSLDIQNVKGETPLDMALQNKNQLIIHMLKTEAKMRANQK
100 110 120 130 140 150
290 300 310 320 330 340
pF1KA0 PSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIADLNIDSWLIKGLMYGGVWATVQFLSKS
. : :. . : ..: ...: .:.: :.: ::::.:: . .. .... .
CCDS44 FRLWRWLQKCELF---LLLMLSVITMWAIGYILDFNSDSWLLKGCLLVTLFFLTSLFPRF
160 170 180 190 200
350 360 370 380 390 400
pF1KA0 FFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDLNFLFIHLPFLANSVALFYNFGKSWKS
. .. :: .. :.. ::...:::. :. :: ... :. . ::..: : :.: .
CCDS44 LVGYKNLVYLPTAFLLSSVFWIFMTWFILFFPDLAGAPFYFSFIFSIVAFLYFFYKTWAT
210 220 230 240 250 260
410 420 430 440 450 460
pF1KA0 DPGIIKATEEQKKKTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCP
:::. ::.::.:: .:. ::::::::. ::..::::::.:: :: ::: :.:..:.::
CCDS44 DPGFTKASEEEKKVNIITLAETGSLDFRTFCTSCLIRKPLRSLHCHVCNCCVARYDQHCL
270 280 290 300 310 320
470 480 490 500 510 520
pF1KA0 WVGNCVGAGNHRYFMGYLFFLLFMIC-WMIYGCISYWGLHCETTYTKDGFWTYITQIATC
:.: :.: :::.:.. .:::: :.: :.::: . : . :: ::. .::.:::..::..:
CCDS44 WTGRCIGFGNHHYYIFFLFFLS-MVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVAC
330 340 350 360 370 380
530 540 550 560 570 580
pF1KA0 SPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGITTNERMNARRY-KHFKVTTTSIESPF
:::...... ..::: : . ::. :..::. ::.:..::.. .. ::.: : . ..:.
CCDS44 SPWVLYILMLATFHFSWSTFLLLNQLFQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPY
390 400 410 420 430 440
590 600 610 620 630
pF1KA0 NHGCVRNIIDFFEFRCCGLFRPVIVDWTRQYTIEYDQISGSGYQLV
: : ..:. :::. : :: .: .:::: :::. .
CCDS44 NLGFMQNLADFFQCGCFGLVKPCVVDWTSQYTMVFHPAREKVLRSV
450 460 470 480 490
632 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 20:06:15 2016 done: Wed Nov 2 20:06:16 2016
Total Scan time: 2.320 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]