Result of FASTA (ccds) for
pF1KA0947
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0947, 2266 aa
1>>>pF1KA0947 2266 - 2266 aa - 2266 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.3781+/-0.00132; mu= -6.5373+/- 0.079
mean_var=357.0310+/-74.739, 0's: 0 Z-trim(111.9): 21 B-trim: 399 in 1/50
Lambda= 0.067877
statistics sampled from 12769 (12782) to 12769 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.393), width: 16
Scan time: 7.970
The best scores are: opt bits E(32554)
CCDS47187.1 ICE1 gene_id:23379|Hs108|chr5 (2266) 14932 1478.0 0
>>CCDS47187.1 ICE1 gene_id:23379|Hs108|chr5 (2266 aa)
initn: 14932 init1: 14932 opt: 14932 Z-score: 7912.6 bits: 1478.0 E(32554): 0
Smith-Waterman score: 14932; 99.9% identity (100.0% similar) in 2266 aa overlap (1-2266:1-2266)
10 20 30 40 50 60
pF1KA0 MMPGETHSAAPGTAADLSRCQGCASLQQNLNEYVEALITLKQKIINTDNLLTEYQKKCDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MMPGETHSAAPGTAADLSRCQGCASLQQNLNEYVEALITLKQKIINTDNLLTEYQKKCDE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 LQFARRENSNLHHQVEEMLQKISPLQKCQEELGSLKAELEEKKSSLKLYQDTHQEYARVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LQFARRENSNLHHQVEEMLQKISPLQKCQEELGSLKAELEEKKSSLKLYQDTHQEYARVK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EECLKSDAQKKKLEAKVKKLQEAAVKQTQDFKQLRNEKKILEKEFKKTQERLDEFSKQKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EECLKSDAQKKKLEAKVKKLQEAAVKQTQDFKQLRNEKKILEKEFKKTQERLDEFSKQKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EKELRHIGTQISSDSYGSIDKRKVKLLLKELWLCVNTTHRLPGEGSRCVPEKPAKAITSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EKELRHIGTQISSDSYGSIDKRKVKLLLKELWLCVNTTHRLPGEGSRCVPEKPAKAITSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 RVPGEDGTLPPTQGSPLRTSNVQTCLTKLSMEIKEDFLCQNVEKQSSSGTNCSSDHVFNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RVPGEDGTLPPTQGSPLRTSNVQTCLTKLSMEIKEDFLCQNVEKQSSSGTNCSSDHVFNE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NGNLEVLVQSHRDGGSTEFVDHDHFFDEDLQAAIDFFKLPPPLLSPVPSPPPMSSPHPGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NGNLEVLVQSHRDGGSTEFVDHDHFFDEDLQAAIDFFKLPPPLLSPVPSPPPMSSPHPGS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 LPSSFAPETYFGEYTDSSDNDSVQLRNSAESVSEDDTTESQNYFGSLRKNKGSGTWEEKP
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
CCDS47 LPSSFAPETYFGEYTDSSDNDSVQLRNSAECVSEDDTTESQNYFGSLRKNKGSGTWEEKP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 KSHEAIQALNTWEVNKVTTSGLETFTATLRESSATHSLVGEKHWTTASRSMSDRKRDILH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KSHEAIQALNTWEVNKVTTSGLETFTATLRESSATHSLVGEKHWTTASRSMSDRKRDILH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 ETKTQMEVREMDKSVQTEKTIHKLTRGLCIERLSASPAQEKEAAPGKSELCSSPLGKRPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ETKTQMEVREMDKSVQTEKTIHKLTRGLCIERLSASPAQEKEAAPGKSELCSSPLGKRPL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 NELMESEGKTVLSKMMGSPKSEFTKWTRINEITSEPDRITVSGHFHRLSRELEKEKEDTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NELMESEGKTVLSKMMGSPKSEFTKWTRINEITSEPDRITVSGHFHRLSRELEKEKEDTQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 GFTLGESPESEDDDSGDGMDVAGLDIETSFSSSSTLVALSVGSNPQSSSGLDCGNDTDIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GFTLGESPESEDDDSGDGMDVAGLDIETSFSSSSTLVALSVGSNPQSSSGLDCGNDTDIT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 TKVFSTEPHHSEHKLQTKTLNTLHLQSEPPECSIGGNNLENSLCALSPELGASNFNDQKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TKVFSTEPHHSEHKLQTKTLNTLHLQSEPPECSIGGNNLENSLCALSPELGASNFNDQKS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 SGIEYTKVVKGLTKIHSLPRSVFMKATKDGQCESQDPRIELTLNKPDFTSLIGSQAALIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SGIEYTKVVKGLTKIHSLPRSVFMKATKDGQCESQDPRIELTLNKPDFTSLIGSQAALIK
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 SGLGFVKSTSWHHSDLLRKGGEESLRAKSEHEQKTSHQLQKAMPFLQNRGPTPKPDLLRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SGLGFVKSTSWHHSDLLRKGGEESLRAKSEHEQKTSHQLQKAMPFLQNRGPTPKPDLLRE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 NNNPVEFKTTASVLPNQVSVITKQTRPEKVQSAKLEHLRPHRVEPTLVTENSGNKTGMST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NNNPVEFKTTASVLPNQVSVITKQTRPEKVQSAKLEHLRPHRVEPTLVTENSGNKTGMST
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 IAKCDGERDDTTQNITEVAAVKSISPEVSASRRKLDFNSPGGSSPVENSDCSTNSRLSFS
.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VAKCDGERDDTTQNITEVAAVKSISPEVSASRRKLDFNSPGGSSPVENSDCSTNSRLSFS
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 PENILIQNQDIVREAAVQGDGQKQRQPQATDLDSSGTHGSEMLPATEVTVSGGFSVEETS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PENILIQNQDIVREAAVQGDGQKQRQPQATDLDSSGTHGSEMLPATEVTVSGGFSVEETS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 CGDTGRSGGEALAVANDSTSTPQNANGLWKLKSTTPGGALPECFGTTDTTFSSAFCRKHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CGDTGRSGGEALAVANDSTSTPQNANGLWKLKSTTPGGALPECFGTTDTTFSSAFCRKHG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 ETQDTSQSSLPGTLHCYTGIREGGDDTEVESEAFSCSEGSEQQDAPDDSQKNLGDTDAAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ETQDTSQSSLPGTLHCYTGIREGGDDTEVESEAFSCSEGSEQQDAPDDSQKNLGDTDAAV
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 AEVRPSLEVGYLTSALQDFNISTFSELDRLSTSEVVMFLESCQLGDYSSGDSVSECSSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AEVRPSLEVGYLTSALQDFNISTFSELDRLSTSEVVMFLESCQLGDYSSGDSVSECSSKG
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 TLSKEMNKELKASEIGEKYRKQPCEEETLGTCEEWIESEEDDYSLKNTSQLTQCSLETLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TLSKEMNKELKASEIGEKYRKQPCEEETLGTCEEWIESEEDDYSLKNTSQLTQCSLETLS
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 EVLTKIRQELQTNSEDCNGKDTGSLLLLNVNNNMTTENLKEKSPFRETTGSSSHASEPTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EVLTKIRQELQTNSEDCNGKDTGSLLLLNVNNNMTTENLKEKSPFRETTGSSSHASEPTP
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 QAAALDTEGSSPISGMPQNENPQSRPEARSDAGRQTDGGEEDLPEPVEPSALCSDSVMEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QAAALDTEGSSPISGMPQNENPQSRPEARSDAGRQTDGGEEDLPEPVEPSALCSDSVMEP
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 SIEQSSNCEAETTFQCQIATVTSEVINVLINKDQNLVIEKGDNWTIISGVAVLPHVDQVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SIEQSSNCEAETTFQCQIATVTSEVINVLINKDQNLVIEKGDNWTIISGVAVLPHVDQVT
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 LCDIPGDIPISQDQGELEAGCIPVTSAEKSPEASHTGPAFQEAPCGNNLSCPQEDVSSSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LCDIPGDIPISQDQGELEAGCIPVTSAEKSPEASHTGPAFQEAPCGNNLSCPQEDVSSSG
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 QSTNFDKSRLRNRPVKPSIWISSQIYDQNFETQIVASDHTYYNSKLEPSGKNKNRSKISN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QSTNFDKSRLRNRPVKPSIWISSQIYDQNFETQIVASDHTYYNSKLEPSGKNKNRSKISN
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 KDQSNKPVKTSASSRVETHQSEVAQSFSGEKANTKTQRSQTQTILANADTSTPTDCSPDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KDQSNKPVKTSASSRVETHQSEVAQSFSGEKANTKTQRSQTQTILANADTSTPTDCSPDT
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 LSKIRQEVGPPLPPLLAPLIATPPRTSQPLSPLISSSSPSSPASPVGQVSPFRETPVPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LSKIRQEVGPPLPPLLAPLIATPPRTSQPLSPLISSSSPSSPASPVGQVSPFRETPVPPA
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA0 MSPWPEDPRRASPPDPSPSPSAASASERVVPSPLQFCAATPKHALPVPGRLPPCASGHAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MSPWPEDPRRASPPDPSPSPSAASASERVVPSPLQFCAATPKHALPVPGRLPPCASGHAA
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA0 VGGPQENSVKILDTMYPELSARARTLNILKGNIQLTRGPPADCKNLPGPASAMIGFKTIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VGGPQENSVKILDTMYPELSARARTLNILKGNIQLTRGPPADCKNLPGPASAMIGFKTIT
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA0 SAATAFVKTGSSSGGDCNQDKSRDLGTQQDSSGKRTLSTSTLRSAKRLRLDTGSPEPETR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SAATAFVKTGSSSGGDCNQDKSRDLGTQQDSSGKRTLSTSTLRSAKRLRLDTGSPEPETR
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KA0 GVTAEGIHKNLPGNLPPAEVATTNEERSCSSPAVSAVSQLPLSPKETVESHDKAIANALK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GVTAEGIHKNLPGNLPPAEVATTNEERSCSSPAVSAVSQLPLSPKETVESHDKAIANALK
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KA0 KIAEFSFDLLPVIRSHVYVGNISKKPVMRDQEKEVVYEFSTTKKHLAECLLHSILSELKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KIAEFSFDLLPVIRSHVYVGNISKKPVMRDQEKEVVYEFSTTKKHLAECLLHSILSELKI
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KA0 QKISMDHNYIHALCRVYVGICRQLGDLERARLFCYSLLKEDFPESEKLTLFIANMWHDIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QKISMDHNYIHALCRVYVGICRQLGDLERARLFCYSLLKEDFPESEKLTLFIANMWHDIF
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KA0 LSQSVINKAMQLVARQRAKGEVLNCLRAFLNWEKNAPVDVGFMVSKLLLTIQLCPKTEFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LSQSVINKAMQLVARQRAKGEVLNCLRAFLNWEKNAPVDVGFMVSKLLLTIQLCPKTEFQ
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KA0 PSEKFGEDLSDNTWEYIFAIDLLCCHQKWIWTHDNIISKELWPVMDKWIKYRKGHANIAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PSEKFGEDLSDNTWEYIFAIDLLCCHQKWIWTHDNIISKELWPVMDKWIKYRKGHANIAY
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KA0 TPDIIIASILRLIGRLGQLGLKEGFPSAVKNISSVIGMFIQHAHDEDIPWGIQLAAVYAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TPDIIIASILRLIGRLGQLGLKEGFPSAVKNISSVIGMFIQHAHDEDIPWGIQLAAVYAL
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260
pF1KA0 CDLSPSNPAEISKILEAWRREASKSVPSAIVSCLEEVSALSTEELG
::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CDLSPSNPAEISKILEAWRREASKSVPSAIVSCLEEVSALSTEELG
2230 2240 2250 2260
2266 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:34:30 2016 done: Thu Nov 3 10:34:31 2016
Total Scan time: 7.970 Total Display time: 0.240
Function used was FASTA [36.3.4 Apr, 2011]