Result of FASTA (ccds) for
pF1KA0954
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0954, 1151 aa
1>>>pF1KA0954 1151 - 1151 aa - 1151 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.2422+/-0.00119; mu= -11.7403+/- 0.071
mean_var=535.8698+/-111.293, 0's: 0 Z-trim(115.4): 31 B-trim: 413 in 1/53
Lambda= 0.055404
statistics sampled from 15946 (15974) to 15946 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.491), width: 16
Scan time: 6.140
The best scores are: opt bits E(32554)
CCDS44622.1 MYRF gene_id:745|Hs108|chr11 (1151) 7902 647.3 6e-185
CCDS31579.1 MYRF gene_id:745|Hs108|chr11 (1111) 5458 451.9 3.8e-126
CCDS76577.1 MYRFL gene_id:196446|Hs108|chr12 ( 910) 1825 161.5 8.5e-39
>>CCDS44622.1 MYRF gene_id:745|Hs108|chr11 (1151 aa)
initn: 7902 init1: 7902 opt: 7902 Z-score: 3433.9 bits: 647.3 E(32554): 6e-185
Smith-Waterman score: 7902; 100.0% identity (100.0% similar) in 1151 aa overlap (1-1151:1-1151)
10 20 30 40 50 60
pF1KA0 MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 HGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 PPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 WATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 WATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 EGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 FSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 SDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 TEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 KTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 SGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSV
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 VSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLR
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 QSPLTTGLPGIQPSLLLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QSPLTTGLPGIQPSLLLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 GPSFNPGHVLSPSPSPSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GPSFNPGHVLSPSPSPSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLAS
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 PAVPFPGGQGKAKNSPSLGFHGRARRGALQSSVGPAEPTWAQGQSASLLAEPVPSLTSIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PAVPFPGGQGKAKNSPSLGFHGRARRGALQSSVGPAEPTWAQGQSASLLAEPVPSLTSIQ
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 VLENSMSITSQYCAPGDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VLENSMSITSQYCAPGDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSK
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 EEPCEEGSLPQSLHTHQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EEPCEEGSLPQSLHTHQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPAT
1090 1100 1110 1120 1130 1140
1150
pF1KA0 DYHFHFYRLCD
:::::::::::
CCDS44 DYHFHFYRLCD
1150
>>CCDS31579.1 MYRF gene_id:745|Hs108|chr11 (1111 aa)
initn: 6604 init1: 5414 opt: 5458 Z-score: 2378.3 bits: 451.9 E(32554): 3.8e-126
Smith-Waterman score: 7505; 97.2% identity (97.2% similar) in 1136 aa overlap (16-1151:7-1111)
10 20 30 40 50 60
pF1KA0 MEVVDETEALQRFFEGHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYS
:::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MHWLPAGHDINGALEPSNIDTSILEEYISKEDASDLCFPDISAPASSASYS
10 20 30 40 50
70 80 90 100 110 120
pF1KA0 HGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 HGQPAMPGSSGVHHLSPPGGGPSPGRHGPLPPPGYGTPLNCNNNNGMGAAPKPFPGGTGP
60 70 80 90 100 110
130 140 150 160 170 180
pF1KA0 PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PIKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCHVGVPSRLEHPPP
120 130 140 150 160 170
190 200 210 220 230 240
pF1KA0 PPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLHQL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KA0 LQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPTRAPSPPWPPQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KA0 GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GPLSPGPGSLPLSIARVQTPPWHPPGAPSPGLLQDSDSLSGSYLDPNYQSIKWQPHQQNK
300 310 320 330 340 350
370 380 390 400 410 420
pF1KA0 WATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 WATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEPKYVKTP
360 370 380 390 400 410
430 440 450 460 470 480
pF1KA0 EGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKVTVGRLH
420 430 440 450 460 470
490 500 510 520 530 540
pF1KA0 FSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 FSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNPGQFESD
480 490 500 510 520 530
550 560 570 580 590 600
pF1KA0 SDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEHVQEVDT
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA0 TEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGDMVFANG
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA0 KTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDSLKSTGS
660 670 680 690 700 710
730 740 750 760 770 780
pF1KA0 SGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVVPDQACISQRFLQGTIIALVVVMAFSV
720 730 740 750 760 770
790 800 810 820 830 840
pF1KA0 VSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSSQSFGTTQLR
:::::::::::::::::::::: :::::::::::
CCDS31 VSMSTLYVLSLRTEEDLVDTDGR--------------------------SSQSFGTTQLR
780 790 800
850 860 870 880 890 900
pF1KA0 QSPLTTGLPGIQPSLLLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QSPLTTGLPGIQPSLLLVTTSLTSSAPGSAVRTLDMCSSHPCPVICCSSPTTNPTTGPSL
810 820 830 840 850 860
910 920 930 940 950 960
pF1KA0 GPSFNPGHVLSPSPSPSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GPSFNPGHVLSPSPSPSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSKHHKSLEPLAS
870 880 890 900 910 920
970 980 990 1000 1010 1020
pF1KA0 PAVPFPGGQGKAKNSPSLGFHGRARRGALQSSVGPAEPTWAQGQSASLLAEPVPSLTSIQ
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
CCDS31 PAVPFPGGQGKAKNSPSLGFHGRARRGALQSSVGPAEPTWAQGQS-----EPVPSLTSIQ
930 940 950 960 970 980
1030 1040 1050 1060 1070 1080
pF1KA0 VLENSMSITSQYCAPGDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VLENSMSITSQYCAPGDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSK
990 1000 1010 1020 1030 1040
1090 1100 1110 1120 1130 1140
pF1KA0 EEPCEEGSLPQSLHTHQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EEPCEEGSLPQSLHTHQDTQGTSHRWPITILSFREFTYHFRVALLGQANCSSEALAQPAT
1050 1060 1070 1080 1090 1100
1150
pF1KA0 DYHFHFYRLCD
:::::::::::
CCDS31 DYHFHFYRLCD
1110
>>CCDS76577.1 MYRFL gene_id:196446|Hs108|chr12 (910 aa)
initn: 1918 init1: 1306 opt: 1825 Z-score: 810.0 bits: 161.5 E(32554): 8.5e-39
Smith-Waterman score: 2012; 39.3% identity (61.3% similar) in 1019 aa overlap (152-1150:23-909)
130 140 150 160 170
pF1KA0 IKAEPKAPYAPGTLPDSPPDSGSEAYSPQQVNEPHLLRTITPETLCH---VGVPSRLEHP
...: : .. : : . .:. .:
CCDS76 MDVVGENEALQQFFEAQGANGTLENPALDTSLLEEFLGNDFDLGALQRQLPD
10 20 30 40 50
180 190 200 210 220 230
pF1KA0 PPPPAHLPGPPPPPPPPPHYPVLQRDLYMKAEPPIPHYAAMGQGLVPTDLHHTQQSQMLH
:: . . :: ::.: : .. :. : .: . .. : .: :... .
CCDS76 TPPYSASDSCSPPQVKGACYPTL-RPTAGRTPAPFLHPTA-APAMPP--MHPLQSTSGMG
60 70 80 90 100
240 250 260 270 280 290
pF1KA0 QLLQQHGAELPTHPSKKRKHSESPPSTLNAQMLNGMIKQEPGTVTALPLHPT-RAPSPPW
. : ::. : . . : .: :. .... : . : .: ..:.
CCDS76 DSCQIHGGFHSCHSNAS--HLATP--------LDQSVSSHLGIGCSYPQQPLCHSPGASL
110 120 130 140 150
300 310 320 330 340 350
pF1KA0 PPQGPLSPGPGSLPLSIARVQTPPWHPPGAPS-PGLLQDSDSLSGSYL--DPNYQSIKWQ
:: . . . :: . .: . : . .:: :: . . . : ..:::
CCDS76 PPTKKRKCTQALEDSGECRVWACHCRPMTSRSRSSEVQDPDSEGQNRMPTDQCSPALKWQ
160 170 180 190 200 210
360 370 380 390 400 410
pF1KA0 PHQQNKWATLYDANYKELPMLTYRVDADKGFNFSVGDDAFVCQKKNHFQVTVYIGMLGEP
: .. : .: ...:..:: . ::: .::::::: .:.:::::::::::.:..: . : :
CCDS76 PCHSVPWHSLLNSHYEKLPDVGYRVVTDKGFNFSPADEAFVCQKKNHFQITIHIQVWGSP
220 230 240 250 260 270
420 430 440 450 460 470
pF1KA0 KYVKTPEGLKPLDCFYLKLHGVKLEALNQSINIEQSQSDRSKRPFNPVTVNLPPEQVTKV
:.:.: ::::.. ::::. :.:.:: :: : :::::.::::. :::: ..: .:::::
CCDS76 KFVETEMGLKPIEMFYLKVFGTKVEATNQIIAIEQSQADRSKKIFNPVKIDLLADQVTKV
280 290 300 310 320 330
480 490 500 510 520 530
pF1KA0 TVGRLHFSETTANNMRKKGKPNPDQRYFMLVVALQAHAQNQNYTLAAQISERIIVRASNP
:.::::::::::::::::::::::::::::::.: : :.: : :.:.::::::::::::
CCDS76 TLGRLHFSETTANNMRKKGKPNPDQRYFMLVVGLYAANQDQFYLLSAHISERIIVRASNP
340 350 360 370 380 390
540 550 560 570 580 590
pF1KA0 GQFESDSDVLWQRAQVPDTVFHHGRVGINTDRPDEALVVHGNVKVMGSLMHPSDLRAKEH
::::.:::.::::.:::... ::::::::: ::::::: ::.::::..::::: :::..
CCDS76 GQFENDSDALWQRGQVPESIVCHGRVGINTDAPDEALVVCGNMKVMGTIMHPSDSRAKQN
400 410 420 430 440 450
600 610 620 630 640 650
pF1KA0 VQEVDTTEQLKRISRMRLVHYRYKPEFAASAGIEATAPETGVIAQEVKEILPEAVKDTGD
.:::::.::::::..::.:.: ::::::.. ::. :: .::.:::::.::::.::...::
CCDS76 IQEVDTNEQLKRIAQMRIVEYDYKPEFASAMGIN-TAHQTGMIAQEVQEILPRAVREVGD
460 470 480 490 500 510
660 670 680 690 700 710
pF1KA0 MVFANGKTIENFLVVNKERIFMENVGAVKELCKLTDNLETRIDELERWSHKLAKLRRLDS
.. .::.:.::::.:.:..::::::::::.:::::.::: ::.::: :..:::.:.::.:
CCDS76 VTCGNGETLENFLMVDKDQIFMENVGAVKQLCKLTNNLEERIEELEIWNRKLARLKRLSS
520 530 540 550 560 570
720 730 740 750 760 770
pF1KA0 LKSTGSSGAFSHAGSQFSRAGSVPHKKRPPKVASKSSSVV---PDQACISQRFLQGTIIA
::..: .. . :. ::: :. .: : .:...: ::: . : : .:.
CCDS76 WKSSASEAS---TISKSSRAVSASSPRRA--VHKKNNKVYFSGKRQACPNWVF-QTLVIT
580 590 600 610 620 630
780 790 800 810 820 830
pF1KA0 LVVVMAFSVVSMSTLYVLSLRTEEDLVDTDGSFAVSTSCLLALLRPQPPGGSEALCPWSS
:..:::: .... .::.:::. .. : . ...: : : :: : .:
CCDS76 LIAVMAFCALTIVALYILSLKDQDRRVPNLPPSNITSS--------QEP----ALLPTAS
640 650 660 670
840 850 860 870 880 890
pF1KA0 QSFGTTQLRQSPLTTGLPGIQPSLLLVTTSLTSSAPGSAVRTLDMCSSHPCP-VICCSSP
.: .:.: .: . .: : .: :: . ::
CCDS76 SSAPNTSLVTTPASLQVPEIT-----------------------FCEILPCQETYCC---
680 690 700 710
900 910 920 930 940 950
pF1KA0 TTNPTTGPSLGPSFNPGHVLSPSPSPSTNRSGPSQMALLPVTNIRAKSWGLSVNGIGHSK
: : . : :: .: ... . . :.
CCDS76 ---PIRG-----------MKEVSSSPVQRQSEEKEF--------HQRRWS----------
720 730 740
960 970 980 990 1000
pF1KA0 HHKSLEPLASPAVPFPGGQGKAKNSPSLGFHGRARRGALQSSVGPA-EPTWAQGQSASLL
. :: :: :.::. :: : : .
CCDS76 EDKSKSVLA--------------------------RNALS---GPDWESDWID-------
750 760
1010 1020 1030 1040 1050 1060
pF1KA0 AEPVPSLTSIQVLENSMSITSQYCAPGDACRPGNFTYHIPVSSGTPLHLSLTLQMNSSSP
...:::..: .. : ::: . : ::..:.:::.. :: .....:..:.. :
CCDS76 ----TTISSIQIMEIQQIIDHQYCIQSLQCGSGNYNYNIPVNKHTPTNVKFSLEINTTEP
770 780 790 800 810 820
1070 1080 1090 1100 1110 1120
pF1KA0 VSVVLCSLRSKEEPCEEGSL-PQSLHTHQD-----TQGTSHRWPITILSFREFTYHFRVA
. : :.. . . : ... ..:..:.. ::: .: : . . : . .:::::
CCDS76 LIVFQCKF-TLGNICFHSKRGTKGLESHREISQEMTQGYQHIWSLPVAPFSDSMFHFRVA
830 840 850 860 870 880
1130 1140 1150
pF1KA0 LLGQANCSSEALAQPA--TDYHFHFYRLCD
:.::.. ::: :.::: :
CCDS76 APDLADCSTDPYFAGIFFTDYFFYFYRRCA
890 900 910
1151 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:35:13 2016 done: Thu Nov 3 10:35:14 2016
Total Scan time: 6.140 Total Display time: 0.190
Function used was FASTA [36.3.4 Apr, 2011]