Result of FASTA (ccds) for
pF1KA1023
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1023, 630 aa
1>>>pF1KA1023 630 - 630 aa - 630 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.2324+/-0.000945; mu= -1.8633+/- 0.057
mean_var=287.3612+/-57.420, 0's: 0 Z-trim(114.7): 29 B-trim: 11 in 1/53
Lambda= 0.075659
statistics sampled from 15256 (15271) to 15256 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.469), width: 16
Scan time: 3.670
The best scores are: opt bits E(32554)
CCDS75560.1 IQCE gene_id:23288|Hs108|chr7 ( 630) 4125 463.8 3.2e-130
CCDS43542.1 IQCE gene_id:23288|Hs108|chr7 ( 695) 4125 463.8 3.4e-130
CCDS47527.2 IQCE gene_id:23288|Hs108|chr7 ( 686) 3853 434.1 2.9e-121
CCDS75559.1 IQCE gene_id:23288|Hs108|chr7 ( 702) 3853 434.1 3e-121
>>CCDS75560.1 IQCE gene_id:23288|Hs108|chr7 (630 aa)
initn: 4125 init1: 4125 opt: 4125 Z-score: 2451.5 bits: 463.8 E(32554): 3.2e-130
Smith-Waterman score: 4125; 99.7% identity (99.8% similar) in 630 aa overlap (1-630:1-630)
10 20 30 40 50 60
pF1KA1 MPLGGRASLTPQKLWLGTAKPGSLTQALNSPLTWEHAWTGVPGGTPDCLTDTFRVKRPHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MPLGGRASLTPQKLWLGTAKPGSLTQALNSPLTWEHAWTGVPGGTPDCLTDTFRVKRPHL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 RRSASNGHVPGTPVYREKEDMYDEIIELKKSLHVQKSDVDLMRTKLRRLEEENSGKDRQI
:::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
CCDS75 RRSASNGHVPGTPVYREKEDMYDEIIELKKSLHVQKSDVDLMRTKLRRLEEENSRKDRQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 EQLLDPSRGTDLVRTLAEKRPDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNL
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EQLLDPSRGTDFVRTLAEKRPDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EEMRIAMETYYEEVHRLQTLLASSETTGKKPLGEKKTGAKRQKKMGSALLSLSRSVQELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EEMRIAMETYYEEVHRLQTLLASSETTGKKPLGEKKTGAKRQKKMGSALLSLSRSVQELT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 EENQSLKEDLDRVLSTSPTISKTQGYVEWSKPRLLRRIVELEKKLSVMESSKSHAAEPVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EENQSLKEDLDRVLSTSPTISKTQGYVEWSKPRLLRRIVELEKKLSVMESSKSHAAEPVR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 SHPPACLASSSALHRQPRGDRNKDHERLRGAVRDLKEERTALQEQLLQRDLEVKQLLQAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 SHPPACLASSSALHRQPRGDRNKDHERLRGAVRDLKEERTALQEQLLQRDLEVKQLLQAK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 ADLEKELECAREGEEERREREEVLREEIQTLTSKLQELQEMKKEEKEDCPEVPHKAQELP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ADLEKELECAREGEEERREREEVLREEIQTLTSKLQELQEMKKEEKEDCPEVPHKAQELP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 APTPSSRHCEQDWPPDSSEEGLPRPRSPCSDGRRDAAARVLQAQWKVYKHKKKKAVLDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 APTPSSRHCEQDWPPDSSEEGLPRPRSPCSDGRRDAAARVLQAQWKVYKHKKKKAVLDEA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 AVVLQAAFRGHLTRTKLLASKAHGSEPPSVPGLPDQSSPVPRVPSPIAQATGSPVQEEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 AVVLQAAFRGHLTRTKLLASKAHGSEPPSVPGLPDQSSPVPRVPSPIAQATGSPVQEEAI
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 VIIQSALRAHLARARHSATGKRTTTAASTRRRSASATHGDASSPPFLAALPDPSPSGPQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VIIQSALRAHLARARHSATGKRTTTAASTRRRSASATHGDASSPPFLAALPDPSPSGPQA
550 560 570 580 590 600
610 620 630
pF1KA1 LAPLPGDDVNSDDSDDIVIAPSLPTKNFPV
::::::::::::::::::::::::::::::
CCDS75 LAPLPGDDVNSDDSDDIVIAPSLPTKNFPV
610 620 630
>>CCDS43542.1 IQCE gene_id:23288|Hs108|chr7 (695 aa)
initn: 4125 init1: 4125 opt: 4125 Z-score: 2450.9 bits: 463.8 E(32554): 3.4e-130
Smith-Waterman score: 4125; 99.7% identity (99.8% similar) in 630 aa overlap (1-630:66-695)
10 20 30
pF1KA1 MPLGGRASLTPQKLWLGTAKPGSLTQALNS
::::::::::::::::::::::::::::::
CCDS43 HKPPPTSPKSPYLSKPRKVASWRSLRTAGSMPLGGRASLTPQKLWLGTAKPGSLTQALNS
40 50 60 70 80 90
40 50 60 70 80 90
pF1KA1 PLTWEHAWTGVPGGTPDCLTDTFRVKRPHLRRSASNGHVPGTPVYREKEDMYDEIIELKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PLTWEHAWTGVPGGTPDCLTDTFRVKRPHLRRSASNGHVPGTPVYREKEDMYDEIIELKK
100 110 120 130 140 150
100 110 120 130 140 150
pF1KA1 SLHVQKSDVDLMRTKLRRLEEENSGKDRQIEQLLDPSRGTDLVRTLAEKRPDASWVINGL
:::::::::::::::::::::::: ::::::::::::::::.::::::::::::::::::
CCDS43 SLHVQKSDVDLMRTKLRRLEEENSRKDRQIEQLLDPSRGTDFVRTLAEKRPDASWVINGL
160 170 180 190 200 210
160 170 180 190 200 210
pF1KA1 KQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKK
220 230 240 250 260 270
220 230 240 250 260 270
pF1KA1 PLGEKKTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLDRVLSTSPTISKTQGYVEWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PLGEKKTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLDRVLSTSPTISKTQGYVEWS
280 290 300 310 320 330
280 290 300 310 320 330
pF1KA1 KPRLLRRIVELEKKLSVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KPRLLRRIVELEKKLSVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRG
340 350 360 370 380 390
340 350 360 370 380 390
pF1KA1 AVRDLKEERTALQEQLLQRDLEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AVRDLKEERTALQEQLLQRDLEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQT
400 410 420 430 440 450
400 410 420 430 440 450
pF1KA1 LTSKLQELQEMKKEEKEDCPEVPHKAQELPAPTPSSRHCEQDWPPDSSEEGLPRPRSPCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LTSKLQELQEMKKEEKEDCPEVPHKAQELPAPTPSSRHCEQDWPPDSSEEGLPRPRSPCS
460 470 480 490 500 510
460 470 480 490 500 510
pF1KA1 DGRRDAAARVLQAQWKVYKHKKKKAVLDEAAVVLQAAFRGHLTRTKLLASKAHGSEPPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 DGRRDAAARVLQAQWKVYKHKKKKAVLDEAAVVLQAAFRGHLTRTKLLASKAHGSEPPSV
520 530 540 550 560 570
520 530 540 550 560 570
pF1KA1 PGLPDQSSPVPRVPSPIAQATGSPVQEEAIVIIQSALRAHLARARHSATGKRTTTAASTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PGLPDQSSPVPRVPSPIAQATGSPVQEEAIVIIQSALRAHLARARHSATGKRTTTAASTR
580 590 600 610 620 630
580 590 600 610 620 630
pF1KA1 RRSASATHGDASSPPFLAALPDPSPSGPQALAPLPGDDVNSDDSDDIVIAPSLPTKNFPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RRSASATHGDASSPPFLAALPDPSPSGPQALAPLPGDDVNSDDSDDIVIAPSLPTKNFPV
640 650 660 670 680 690
>>CCDS47527.2 IQCE gene_id:23288|Hs108|chr7 (686 aa)
initn: 3853 init1: 3853 opt: 3853 Z-score: 2290.5 bits: 434.1 E(32554): 2.9e-121
Smith-Waterman score: 3853; 99.7% identity (99.8% similar) in 591 aa overlap (1-591:50-640)
10 20 30
pF1KA1 MPLGGRASLTPQKLWLGTAKPGSLTQALNS
::::::::::::::::::::::::::::::
CCDS47 HKPPPTSPKSPYLSKPRKVASWRSLRTAGSMPLGGRASLTPQKLWLGTAKPGSLTQALNS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KA1 PLTWEHAWTGVPGGTPDCLTDTFRVKRPHLRRSASNGHVPGTPVYREKEDMYDEIIELKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PLTWEHAWTGVPGGTPDCLTDTFRVKRPHLRRSASNGHVPGTPVYREKEDMYDEIIELKK
80 90 100 110 120 130
100 110 120 130 140 150
pF1KA1 SLHVQKSDVDLMRTKLRRLEEENSGKDRQIEQLLDPSRGTDLVRTLAEKRPDASWVINGL
:::::::::::::::::::::::: ::::::::::::::::.::::::::::::::::::
CCDS47 SLHVQKSDVDLMRTKLRRLEEENSRKDRQIEQLLDPSRGTDFVRTLAEKRPDASWVINGL
140 150 160 170 180 190
160 170 180 190 200 210
pF1KA1 KQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKK
200 210 220 230 240 250
220 230 240 250 260 270
pF1KA1 PLGEKKTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLDRVLSTSPTISKTQGYVEWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PLGEKKTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLDRVLSTSPTISKTQGYVEWS
260 270 280 290 300 310
280 290 300 310 320 330
pF1KA1 KPRLLRRIVELEKKLSVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KPRLLRRIVELEKKLSVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRG
320 330 340 350 360 370
340 350 360 370 380 390
pF1KA1 AVRDLKEERTALQEQLLQRDLEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AVRDLKEERTALQEQLLQRDLEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQT
380 390 400 410 420 430
400 410 420 430 440 450
pF1KA1 LTSKLQELQEMKKEEKEDCPEVPHKAQELPAPTPSSRHCEQDWPPDSSEEGLPRPRSPCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LTSKLQELQEMKKEEKEDCPEVPHKAQELPAPTPSSRHCEQDWPPDSSEEGLPRPRSPCS
440 450 460 470 480 490
460 470 480 490 500 510
pF1KA1 DGRRDAAARVLQAQWKVYKHKKKKAVLDEAAVVLQAAFRGHLTRTKLLASKAHGSEPPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DGRRDAAARVLQAQWKVYKHKKKKAVLDEAAVVLQAAFRGHLTRTKLLASKAHGSEPPSV
500 510 520 530 540 550
520 530 540 550 560 570
pF1KA1 PGLPDQSSPVPRVPSPIAQATGSPVQEEAIVIIQSALRAHLARARHSATGKRTTTAASTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PGLPDQSSPVPRVPSPIAQATGSPVQEEAIVIIQSALRAHLARARHSATGKRTTTAASTR
560 570 580 590 600 610
580 590 600 610 620 630
pF1KA1 RRSASATHGDASSPPFLAALPDPSPSGPQALAPLPGDDVNSDDSDDIVIAPSLPTKNFPV
:::::::::::::::::::::
CCDS47 RRSASATHGDASSPPFLAALPGNFIHLDSGTRAAGLLRSQPKSGHLQEARAVSGRKGGVS
620 630 640 650 660 670
>>CCDS75559.1 IQCE gene_id:23288|Hs108|chr7 (702 aa)
initn: 3853 init1: 3853 opt: 3853 Z-score: 2290.4 bits: 434.1 E(32554): 3e-121
Smith-Waterman score: 3853; 99.7% identity (99.8% similar) in 591 aa overlap (1-591:66-656)
10 20 30
pF1KA1 MPLGGRASLTPQKLWLGTAKPGSLTQALNS
::::::::::::::::::::::::::::::
CCDS75 HKPPPTSPKSPYLSKPRKVASWRSLRTAGSMPLGGRASLTPQKLWLGTAKPGSLTQALNS
40 50 60 70 80 90
40 50 60 70 80 90
pF1KA1 PLTWEHAWTGVPGGTPDCLTDTFRVKRPHLRRSASNGHVPGTPVYREKEDMYDEIIELKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PLTWEHAWTGVPGGTPDCLTDTFRVKRPHLRRSASNGHVPGTPVYREKEDMYDEIIELKK
100 110 120 130 140 150
100 110 120 130 140 150
pF1KA1 SLHVQKSDVDLMRTKLRRLEEENSGKDRQIEQLLDPSRGTDLVRTLAEKRPDASWVINGL
:::::::::::::::::::::::: ::::::::::::::::.::::::::::::::::::
CCDS75 SLHVQKSDVDLMRTKLRRLEEENSRKDRQIEQLLDPSRGTDFVRTLAEKRPDASWVINGL
160 170 180 190 200 210
160 170 180 190 200 210
pF1KA1 KQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 KQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETYYEEVHRLQTLLASSETTGKK
220 230 240 250 260 270
220 230 240 250 260 270
pF1KA1 PLGEKKTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLDRVLSTSPTISKTQGYVEWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PLGEKKTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLDRVLSTSPTISKTQGYVEWS
280 290 300 310 320 330
280 290 300 310 320 330
pF1KA1 KPRLLRRIVELEKKLSVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 KPRLLRRIVELEKKLSVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRG
340 350 360 370 380 390
340 350 360 370 380 390
pF1KA1 AVRDLKEERTALQEQLLQRDLEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 AVRDLKEERTALQEQLLQRDLEVKQLLQAKADLEKELECAREGEEERREREEVLREEIQT
400 410 420 430 440 450
400 410 420 430 440 450
pF1KA1 LTSKLQELQEMKKEEKEDCPEVPHKAQELPAPTPSSRHCEQDWPPDSSEEGLPRPRSPCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LTSKLQELQEMKKEEKEDCPEVPHKAQELPAPTPSSRHCEQDWPPDSSEEGLPRPRSPCS
460 470 480 490 500 510
460 470 480 490 500 510
pF1KA1 DGRRDAAARVLQAQWKVYKHKKKKAVLDEAAVVLQAAFRGHLTRTKLLASKAHGSEPPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DGRRDAAARVLQAQWKVYKHKKKKAVLDEAAVVLQAAFRGHLTRTKLLASKAHGSEPPSV
520 530 540 550 560 570
520 530 540 550 560 570
pF1KA1 PGLPDQSSPVPRVPSPIAQATGSPVQEEAIVIIQSALRAHLARARHSATGKRTTTAASTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PGLPDQSSPVPRVPSPIAQATGSPVQEEAIVIIQSALRAHLARARHSATGKRTTTAASTR
580 590 600 610 620 630
580 590 600 610 620 630
pF1KA1 RRSASATHGDASSPPFLAALPDPSPSGPQALAPLPGDDVNSDDSDDIVIAPSLPTKNFPV
:::::::::::::::::::::
CCDS75 RRSASATHGDASSPPFLAALPGNFIHLDSGTRAAGLLRSQPKSGHLQEARAVSGRKGGVS
640 650 660 670 680 690
630 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:03:24 2016 done: Sat Nov 5 22:03:25 2016
Total Scan time: 3.670 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]