(Circular) (Six-base) MAPSORT of: pF1KA1139.seq Check: 1202 from: 1 to: 6719 pF1KA1139 6719 bp With 182 enzymes: SgfI * September 18, 2009 16:59 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 1291 2190 2874 1291 Size: 899 684 5136 Fragments arranged by size: 5136 899 684 AccI GT'mk_AC Cuts at: 3757 3757 Size: 6719 Acc65I G'GTAC_C Cuts at: 3735 3735 Size: 6719 AclI AA'CG_TT Cuts at: 6559 6559 Size: 6719 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 979 4544 4976 5723 5991 979 Size: 3565 432 747 268 1707 Fragments arranged by size: 3565 1707 747 432 268 AfeI AGC'GCT Cuts at: 971 971 Size: 6719 AflIII A'CryG_T Cuts at: 4071 5175 6152 4071 Size: 1104 977 4638 Fragments arranged by size: 4638 1104 977 AgeI A'CCGG_T Cuts at: 157 5107 157 Size: 4950 1769 AleI CACnn'nnGTG Cuts at: 623 623 Size: 6719 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 370 488 710 1244 370 Size: 118 222 534 5845 Fragments arranged by size: 5845 534 222 118 AlwNI CAG_nnn'CTG Cuts at: 126 171 732 936 1425 1452 1563 2914 3073 Size: 45 561 204 489 27 111 1351 159 Cuts at: 3073 3549 4024 5591 126 Size: 476 475 1567 1254 Fragments arranged by size: 1567 1351 1254 561 489 476 475 204 159 111 45 27 ApaI G_GGCC'C Cuts at: 2459 2697 2792 2813 2882 3529 2459 Size: 238 95 21 69 647 5649 Fragments arranged by size: 5649 647 238 95 69 21 ApaLI G'TGCA_C Cuts at: 1811 5489 1811 Size: 3678 3041 ApoI r'AATT_y Cuts at: 577 3723 6072 6328 577 Size: 3146 2349 256 968 Fragments arranged by size: 3146 2349 968 256 AseI AT'TA_AT Cuts at: 20 20 Size: 6719 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 6719 AvaI C'yCGr_G Cuts at: 1122 1271 1924 2657 2933 3020 3223 3739 1122 Size: 149 653 733 276 87 203 516 4102 Fragments arranged by size: 4102 733 653 516 276 203 149 87 AvrII C'CTAG_G Cuts at: 2574 2574 Size: 6719 BamHI G'GATC_C Cuts at: 953 3744 953 Size: 2791 3928 BanI G'GyrC_C Cuts at: 2015 3390 3607 3625 3735 4149 4397 4432 2015 Size: 1375 217 18 110 414 248 35 4302 Fragments arranged by size: 4302 1375 414 248 217 110 35 18 BanII G_rGCy'C Cuts at: 214 299 1372 2392 2459 2697 2785 2792 2813 Size: 85 1073 1020 67 238 88 7 21 Cuts at: 2813 2855 2882 3230 3529 3733 4763 214 Size: 42 27 348 299 204 1030 2170 Fragments arranged by size: 2170 1073 1030 1020 348 299 238 204 88 85 67 42 27 21 7 BbeI G_GCGC'C Cuts at: 2019 4153 4401 2019 Size: 2134 248 4337 Fragments arranged by size: 4337 2134 248 BbsI GAAGACnn'nnnn_ Cuts at: 559 559 Size: 6719 BbvCI CC'TCA_GC Cuts at: 1282 2002 2540 2734 1282 Size: 720 538 194 5267 Fragments arranged by size: 5267 720 538 194 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 985 1019 3657 3691 985 Size: 34 2638 34 4013 Fragments arranged by size: 4013 2638 34 34 BciVI GTATCCnnnnn_n' Cuts at: 4617 5378 6719 4617 Size: 761 1341 4617 Fragments arranged by size: 4617 1341 761 BclI T'GATC_A Cuts at: 4239 4239 Size: 6719 BglI GCCn_nnn'nGGC Cuts at: 402 424 1094 2519 2692 2817 402 Size: 22 670 1425 173 125 4304 Fragments arranged by size: 4304 1425 670 173 125 22 BglII A'GATC_T Cuts at: 1529 4234 6271 1529 Size: 2705 2037 1977 Fragments arranged by size: 2705 2037 1977 BlpI GC'TnA_GC Cuts at: 1600 1748 1753 3327 3831 1600 Size: 148 5 1574 504 4488 Fragments arranged by size: 4488 1574 504 148 5 Bme1580I G_kGCm'C Cuts at: 1099 1381 1721 1815 2217 2314 2459 2619 2697 Size: 282 340 94 402 97 145 160 78 Cuts at: 2697 2792 2813 2882 3038 3395 3529 3628 4344 Size: 95 21 69 156 357 134 99 716 Cuts at: 4344 4437 5493 1099 Size: 93 1056 2325 Fragments arranged by size: 2325 1056 716 402 357 340 282 160 156 145 134 99 97 95 94 93 78 69 21 BmgBI CAC'GTC Cuts at: 846 1545 846 Size: 699 6020 BmrI ACTGGGnnnn_n' Cuts at: 1825 3481 3524 3931 4012 4347 6491 1825 Size: 1656 43 407 81 335 2144 2053 Fragments arranged by size: 2144 2053 1656 407 335 81 43 BmtI G_CTAG'C Cuts at: 3466 3466 Size: 6719 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 5086 5086 Size: 6719 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 313 412 496 658 850 1457 1585 1636 1819 Size: 99 84 162 192 607 128 51 183 Cuts at: 1819 2080 3185 3275 3571 313 Size: 261 1105 90 296 3461 Fragments arranged by size: 3461 1105 607 296 261 192 183 162 128 99 90 84 51 Bpu10I CC'TnA_GC Cuts at: 320 1282 1489 2002 2327 2489 2509 2540 2734 Size: 962 207 513 325 162 20 31 194 Cuts at: 2734 3458 320 Size: 724 3581 Fragments arranged by size: 3581 962 724 513 325 207 194 162 31 20 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 574 958 3370 3895 4774 5266 5564 574 Size: 384 2412 525 879 492 298 1729 Fragments arranged by size: 2412 1729 879 525 492 384 298 BsaI GGTCTCn'nnnn_ Cuts at: 6423 6423 Size: 6719 BsaAI yAC'GTr Cuts at: 863 4072 863 Size: 3209 3510 BsaBI GATnn'nnATC Cuts at: 6 748 2047 4233 6270 6 Size: 742 1299 2186 2037 455 Fragments arranged by size: 2186 2037 1299 742 455 BsaHI Gr'CG_yC Cuts at: 556 2016 2923 3680 3701 4150 4398 5100 6596 Size: 1460 907 757 21 449 248 702 1496 Cuts at: 6596 556 Size: 679 Fragments arranged by size: 1496 1460 907 757 702 679 449 248 21 BsaWI w'CCGG_w Cuts at: 157 854 2034 2624 3908 4429 5107 5381 5528 Size: 697 1180 590 1284 521 678 274 147 Cuts at: 5528 5939 157 Size: 411 937 Fragments arranged by size: 1284 1180 937 697 678 590 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1792 1822 2159 2189 1792 Size: 30 337 30 6322 Fragments arranged by size: 6322 337 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 499 1909 2089 2657 2911 2914 2917 3188 3373 Size: 1410 180 568 254 3 3 271 185 Cuts at: 3373 3485 499 Size: 112 3733 Fragments arranged by size: 3733 1410 568 271 254 185 180 112 3 3 BseYI C'CCAG_C Cuts at: 599 739 1296 1418 1774 1947 2076 2194 2263 Size: 140 557 122 356 173 129 118 69 Cuts at: 2263 2278 2652 2752 2875 3218 3229 3271 3437 Size: 15 374 100 123 343 11 42 166 Cuts at: 3437 3539 3631 4144 4902 5479 5975 599 Size: 102 92 513 758 577 496 1343 Fragments arranged by size: 1343 758 577 557 513 496 374 356 343 173 166 140 129 123 122 118 102 100 92 69 42 15 11 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 184 349 448 458 670 3417 3563 184 Size: 165 99 10 212 2747 146 3340 Fragments arranged by size: 3340 2747 212 165 146 99 10 BsiEI CG_ry'CG Cuts at: 104 1062 3368 4261 4307 5515 104 Size: 958 2306 893 46 1208 1308 Fragments arranged by size: 2306 1308 1208 958 893 46 BsiHKAI G_wGCw'C Cuts at: 299 1372 1815 3514 3733 4511 4701 5493 299 Size: 1073 443 1699 219 778 190 792 1525 Fragments arranged by size: 1699 1525 1073 792 778 443 219 190 BsmBI CGTCTCn'nnnn_ Cuts at: 2748 2748 Size: 6719 Bsp1286I G_dGCh'C Cuts at: 214 299 1099 1372 1381 1721 1815 2217 2314 Size: 85 800 273 9 340 94 402 97 Cuts at: 2314 2392 2459 2619 2697 2785 2792 2813 2855 Size: 78 67 160 78 88 7 21 42 Cuts at: 2855 2882 3038 3230 3395 3514 3529 3628 3733 Size: 27 156 192 165 119 15 99 105 Cuts at: 3733 4344 4437 4511 4701 4763 5493 214 Size: 611 93 74 190 62 730 1440 Fragments arranged by size: 1440 800 730 611 402 340 273 192 190 165 160 156 119 105 99 97 94 93 88 85 78 78 74 67 62 42 27 21 15 9 7 BspEI T'CCGG_A Cuts at: 854 2034 2624 5939 854 Size: 1180 590 3315 1634 Fragments arranged by size: 3315 1634 1180 590 BspHI T'CATG_A Cuts at: 5895 5895 Size: 6719 BspMI ACCTGCnnnn'nnnn_ Cuts at: 1291 1802 2190 2844 2874 3769 3983 4285 4666 Size: 511 388 654 30 895 214 302 381 Cuts at: 4666 1291 Size: 3344 Fragments arranged by size: 3344 895 654 511 388 381 302 214 30 BsrBI CCG'CTC Cuts at: 50 1517 2189 2319 5011 5065 6549 6714 50 Size: 1467 672 130 2692 54 1484 165 55 Fragments arranged by size: 2692 1484 1467 672 165 130 55 54 BsrDI GCAATG_nn' Cuts at: 354 4631 354 Size: 4277 2442 BsrFI r'CCGG_y Cuts at: 157 386 1354 1645 2018 2495 4717 4898 5107 Size: 229 968 291 373 477 2222 181 209 Cuts at: 5107 157 Size: 1769 Fragments arranged by size: 2222 1769 968 477 373 291 229 209 181 BssHII G'CGCG_C Cuts at: 414 414 Size: 6719 BssSI C'ACGA_G Cuts at: 784 1081 4990 5348 784 Size: 297 3909 358 2155 Fragments arranged by size: 3909 2155 358 297 BstAPI GCAn_nnn'nTGC Cuts at: 936 4096 936 Size: 3160 3559 BstBI TT'CG_AA Cuts at: 5080 5080 Size: 6719 BstEII G'GTnAC_C Cuts at: 1704 1704 Size: 6719 BstXI CCAn_nnnn'nTGG Cuts at: 1396 1872 1396 Size: 476 6243 BstYI r'GATC_y Cuts at: 1 455 953 1529 2274 3744 4211 4234 4569 Size: 454 498 576 745 1470 467 23 335 Cuts at: 4569 4815 5827 5913 5925 6271 1 Size: 246 1012 86 12 346 449 Fragments arranged by size: 1470 1012 745 576 498 467 454 449 346 335 246 86 23 12 Bsu36I CC'TnA_GG Cuts at: 948 1682 2915 948 Size: 734 1233 4752 Fragments arranged by size: 4752 1233 734 BtgI C'CryG_G Cuts at: 107 1389 1865 2092 2144 3499 107 Size: 1282 476 227 52 1355 3327 Fragments arranged by size: 3327 1355 1282 476 227 52 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 1743 4669 4850 5013 1743 Size: 2926 181 163 3449 Fragments arranged by size: 3449 2926 181 163 BtsI GCAGTG_nn' Cuts at: 631 1001 1329 1356 1423 1625 2619 3109 3121 Size: 370 328 27 67 202 994 490 12 Cuts at: 3121 3169 3962 631 Size: 48 793 3388 Fragments arranged by size: 3388 994 793 490 370 328 202 67 48 27 12 DraI TTT'AAA Cuts at: 3718 3718 Size: 6719 DraIII CAC_nnn'GTG Cuts at: 2830 2830 Size: 6719 DrdI GACnn_nn'nnGTC Cuts at: 3564 4425 5283 3564 Size: 861 858 5000 Fragments arranged by size: 5000 861 858 EaeI y'GGCC_r Cuts at: 582 705 1059 1386 1505 1549 1694 1877 2024 Size: 123 354 327 119 44 145 183 147 Cuts at: 2024 2045 2141 2232 2349 2450 2602 3140 3365 Size: 21 96 91 117 101 152 538 225 Cuts at: 3365 4304 4478 4869 4896 6241 582 Size: 939 174 391 27 1345 1060 Fragments arranged by size: 1345 1060 939 538 391 354 327 225 183 174 152 147 145 123 119 117 101 96 91 44 27 21 EagI C'GGCC_G Cuts at: 1059 3365 4304 1059 Size: 2306 939 3474 Fragments arranged by size: 3474 2306 939 EarI CTCTTCn'nnn_ Cuts at: 3592 4742 4952 3592 Size: 1150 210 5359 Fragments arranged by size: 5359 1150 210 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 1981 4927 5237 5383 6529 1981 Size: 2946 310 146 1146 2171 Fragments arranged by size: 2946 2171 1146 310 146 EcoICRI GAG'CTC Cuts at: 297 1370 3731 297 Size: 1073 2361 3285 Fragments arranged by size: 3285 2361 1073 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 313 412 496 658 850 979 1457 1585 1636 Size: 99 84 162 192 129 478 128 51 Cuts at: 1636 1819 2080 3185 3275 3571 4544 4976 5723 Size: 183 261 1105 90 296 973 432 747 Cuts at: 5723 5991 313 Size: 268 1041 Fragments arranged by size: 1105 1041 973 747 478 432 296 268 261 192 183 162 129 128 99 90 84 51 EcoNI CCTnn'n_nnAGG Cuts at: 1987 2305 2351 3385 1987 Size: 318 46 1034 5321 Fragments arranged by size: 5321 1034 318 46 EcoO109I rG'GnC_Cy Cuts at: 123 1686 1980 1998 2356 2456 2707 2788 2809 Size: 1563 294 18 358 100 251 81 21 Cuts at: 2809 2810 2911 3858 123 Size: 1 101 947 2984 Fragments arranged by size: 2984 1563 947 358 294 251 101 100 81 21 18 1 EcoRI G'AATT_C Cuts at: 3723 3723 Size: 6719 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 4738 4738 Size: 6719 FspI TGC'GCA Cuts at: 4500 4500 Size: 6719 HaeII r_GCGC'y Cuts at: 781 880 973 2019 2496 2733 2997 3469 3638 Size: 99 93 1046 477 237 264 472 169 Cuts at: 3638 4153 4401 5423 6402 781 Size: 515 248 1022 979 1098 Fragments arranged by size: 1098 1046 1022 979 515 477 472 264 248 237 169 99 93 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 241 273 704 728 736 760 4561 4591 4593 Size: 32 431 24 8 24 3801 30 2 Cuts at: 4593 4623 241 Size: 30 2337 Fragments arranged by size: 3801 2337 431 32 30 30 24 24 8 2 HincII GTy'rAC Cuts at: 333 540 1917 3758 333 Size: 207 1377 1841 3294 Fragments arranged by size: 3294 1841 1377 207 HindIII A'AGCT_T Cuts at: 2329 2329 Size: 6719 KasI G'GCGC_C Cuts at: 2015 4149 4397 2015 Size: 2134 248 4337 Fragments arranged by size: 4337 2134 248 KpnI G_GTAC'C Cuts at: 3739 3739 Size: 6719 MluI A'CGCG_T Cuts at: 6152 6152 Size: 6719 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 548 3280 5390 5574 548 Size: 2732 2110 184 1693 Fragments arranged by size: 2732 2110 1693 184 MscI TGG'CCA Cuts at: 707 1388 1507 2026 2047 2234 2351 3142 4480 Size: 681 119 519 21 187 117 791 1338 Cuts at: 4480 707 Size: 2946 Fragments arranged by size: 2946 1338 791 681 519 187 119 117 21 MslI CAynn'nnrTG Cuts at: 623 1036 1702 4708 4835 623 Size: 413 666 3006 127 2507 Fragments arranged by size: 3006 2507 666 413 127 MspA1I CmG'CkG Cuts at: 363 603 1064 1361 1560 1614 1842 1853 2086 Size: 240 461 297 199 54 228 11 233 Cuts at: 2086 2267 3007 3163 3441 3577 3696 3830 4144 Size: 181 740 156 278 136 119 134 314 Cuts at: 4144 4504 5517 5762 363 Size: 360 1013 245 1320 Fragments arranged by size: 1320 1013 740 461 360 314 297 278 245 240 233 228 199 181 156 136 134 119 54 11 NaeI GCC'GGC Cuts at: 388 1356 1647 2020 4900 388 Size: 968 291 373 2880 2207 Fragments arranged by size: 2880 2207 968 373 291 NarI GG'CG_CC Cuts at: 2016 4150 4398 2016 Size: 2134 248 4337 Fragments arranged by size: 4337 2134 248 NcoI C'CATG_G Cuts at: 107 1389 1865 2144 107 Size: 1282 476 279 4682 Fragments arranged by size: 4682 1282 476 279 NgoMIV G'CCGG_C Cuts at: 386 1354 1645 2018 4898 386 Size: 968 291 373 2880 2207 Fragments arranged by size: 2880 2207 968 373 291 NheI G'CTAG_C Cuts at: 3462 3462 Size: 6719 NspI r_CATG'y Cuts at: 357 3772 4272 5179 357 Size: 3415 500 907 1897 Fragments arranged by size: 3415 1897 907 500 PasI CC'CwG_GG Cuts at: 2385 2410 2432 2785 3307 2385 Size: 25 22 353 522 5797 Fragments arranged by size: 5797 522 353 25 22 PciI A'CATG_T Cuts at: 5175 5175 Size: 6719 PflMI CCAn_nnn'nTGG Cuts at: 2422 2776 3187 2422 Size: 354 411 5954 Fragments arranged by size: 5954 411 354 PfoI T'CCnGG_A Cuts at: 1210 1210 Size: 6719 PmeI GTTT'AAAC Cuts at: 3718 3718 Size: 6719 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 5858 5890 5858 Size: 32 6687 PpuMI rG'GwC_Cy Cuts at: 123 1686 2356 123 Size: 1563 670 4486 Fragments arranged by size: 4486 1563 670 PspOMI G'GGCC_C Cuts at: 2455 2693 2788 2809 2878 3525 2455 Size: 238 95 21 69 647 5649 Fragments arranged by size: 5649 647 238 95 69 21 PstI C_TGCA'G Cuts at: 1167 1643 1904 1991 3116 3766 4451 1167 Size: 476 261 87 1125 650 685 3435 Fragments arranged by size: 3435 1125 685 650 476 261 87 PvuI CG_AT'CG Cuts at: 104 104 Size: 6719 PvuII CAG'CTG Cuts at: 603 1560 1614 1842 2086 3441 3577 3696 4144 Size: 957 54 228 244 1355 136 119 448 Cuts at: 4144 4504 603 Size: 360 2818 Fragments arranged by size: 2818 1355 957 448 360 244 228 136 119 54 RsrII CG'GwC_CG Cuts at: 4914 4914 Size: 6719 SacI G_AGCT'C Cuts at: 299 1372 3733 299 Size: 1073 2361 3285 Fragments arranged by size: 3285 2361 1073 SalI G'TCGA_C Cuts at: 3756 3756 Size: 6719 SapI GCTCTTCn'nnn_ Cuts at: 3592 4742 4952 3592 Size: 1150 210 5359 Fragments arranged by size: 5359 1150 210 SbfI CC_TGCA'GG Cuts at: 3766 3766 Size: 6719 ScaI AGT'ACT Cuts at: 6236 6236 Size: 6719 SexAI A'CCwGG_T Cuts at: 1445 1445 Size: 6719 SfcI C'TryA_G Cuts at: 33 1163 1257 1639 1900 1987 2081 2134 3112 Size: 1130 94 382 261 87 94 53 978 Cuts at: 3112 3762 4447 5440 5631 33 Size: 650 685 993 191 1121 Fragments arranged by size: 1130 1121 993 978 685 650 382 261 191 94 94 87 53 SfoI GGC'GCC Cuts at: 2017 4151 4399 2017 Size: 2134 248 4337 Fragments arranged by size: 4337 2134 248 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 6719 SmaI CCC'GGG Cuts at: 1124 3741 1124 Size: 2617 4102 SmlI C'TyrA_G Cuts at: 589 973 3385 3874 4789 5281 5543 589 Size: 384 2412 489 915 492 262 1765 Fragments arranged by size: 2412 1765 915 492 489 384 262 SnaBI TAC'GTA Cuts at: 863 863 Size: 6719 SpeI A'CTAG_T Cuts at: 67 67 Size: 6719 SphI G_CATG'C Cuts at: 357 3772 4272 357 Size: 3415 500 2804 Fragments arranged by size: 3415 2804 500 StuI AGG'CCT Cuts at: 946 946 Size: 6719 StyI C'CwwG_G Cuts at: 107 1389 1865 2027 2144 2352 2574 2792 3246 Size: 1282 476 162 117 208 222 218 454 Cuts at: 3246 3611 3853 4207 107 Size: 365 242 354 2619 Fragments arranged by size: 2619 1282 476 454 365 354 242 222 218 208 162 117 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 823 1200 1552 3451 4302 4435 4894 5103 823 Size: 377 352 1899 851 133 459 209 2439 Fragments arranged by size: 2439 1899 851 459 377 352 209 133 TatI w'GTAC_w Cuts at: 6234 6234 Size: 6719 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 1456 1488 1792 1824 2159 2191 6236 6268 1456 Size: 32 304 32 335 32 4045 32 1907 Fragments arranged by size: 4045 1907 335 304 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 4516 4516 Size: 6719 XbaI T'CTAG_A Cuts at: 3750 3750 Size: 6719 XcmI CCAnnnn_n'nnnnTGG Cuts at: 247 531 1872 2055 3567 3651 4214 247 Size: 284 1341 183 1512 84 563 2752 Fragments arranged by size: 2752 1512 1341 563 284 183 84 XmaI C'CCGG_G Cuts at: 1122 3739 1122 Size: 2617 4102 XmnI GAAnn'nnTTC Cuts at: 895 895 Size: 6719 Enzymes that do cut: AarI AccI Acc65I AclI AcuI AfeI AflIII AgeI AleI AlfI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI AvrII BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtgZI BtsI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII HindIII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NheI NspI PasI PciI PflMI PfoI PmeI PpiI PpuMI PspOMI PstI PvuI PvuII RsrII SacI SalI SapI SbfI ScaI SexAI SfcI SfoI SgfI SmaI SmlI SnaBI SpeI SphI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XmaI XmnI Enzymes that do not cut: AatII AflII AhdI AloI AscI BaeI BfrBI BsiWI BsmI BsrGI BstZ17I ClaI CspCI EcoRV FseI FspAI HpaI MfeI NdeI NotI NruI NsiI PacI PmlI PshAI PsiI PspXI PsrI SacII SanDI SfiI SgrAI SrfI SspI SwaI XhoI ZraI