Result of FASTA (ccds) for
pF1KA1180
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1180, 352 aa
1>>>pF1KA1180 352 - 352 aa - 352 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7825+/-0.000823; mu= 13.4601+/- 0.050
mean_var=63.4862+/-12.505, 0's: 0 Z-trim(106.4): 27 B-trim: 0 in 0/51
Lambda= 0.160966
statistics sampled from 8959 (8976) to 8959 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.276), width: 16
Scan time: 2.300
The best scores are: opt bits E(32554)
CCDS58466.1 NDRG4 gene_id:65009|Hs108|chr16 ( 352) 2377 560.6 7e-160
CCDS58467.1 NDRG4 gene_id:65009|Hs108|chr16 ( 339) 1990 470.7 7.7e-133
CCDS10797.1 NDRG4 gene_id:65009|Hs108|chr16 ( 371) 1925 455.6 2.9e-128
CCDS45500.1 NDRG4 gene_id:65009|Hs108|chr16 ( 391) 1925 455.7 3.1e-128
CCDS58465.1 NDRG4 gene_id:65009|Hs108|chr16 ( 357) 1923 455.2 3.9e-128
CCDS55999.1 NDRG4 gene_id:65009|Hs108|chr16 ( 369) 1923 455.2 4e-128
CCDS13284.1 NDRG3 gene_id:57446|Hs108|chr20 ( 363) 1426 339.8 2.2e-93
CCDS13285.1 NDRG3 gene_id:57446|Hs108|chr20 ( 375) 1419 338.1 6.9e-93
CCDS34945.1 NDRG1 gene_id:10397|Hs108|chr8 ( 394) 1374 327.7 1e-89
CCDS9564.1 NDRG2 gene_id:57447|Hs108|chr14 ( 357) 1346 321.2 8.4e-88
CCDS61386.1 NDRG2 gene_id:57447|Hs108|chr14 ( 367) 1346 321.2 8.6e-88
CCDS9565.1 NDRG2 gene_id:57447|Hs108|chr14 ( 371) 1346 321.2 8.7e-88
CCDS59113.1 NDRG1 gene_id:10397|Hs108|chr8 ( 328) 1215 290.8 1.1e-78
CCDS59112.1 NDRG1 gene_id:10397|Hs108|chr8 ( 313) 1133 271.7 5.8e-73
CCDS73613.1 NDRG2 gene_id:57447|Hs108|chr14 ( 341) 1034 248.7 5.2e-66
CCDS61384.1 NDRG2 gene_id:57447|Hs108|chr14 ( 360) 982 236.7 2.4e-62
>>CCDS58466.1 NDRG4 gene_id:65009|Hs108|chr16 (352 aa)
initn: 2377 init1: 2377 opt: 2377 Z-score: 2983.8 bits: 560.6 E(32554): 7e-160
Smith-Waterman score: 2377; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352)
10 20 30 40 50 60
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 KHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 AKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQEELVNNTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQEELVNNTE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 DGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYLKDRRLSGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYLKDRRLSGG
250 260 270 280 290 300
310 320 330 340 350
pF1KA1 AVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
310 320 330 340 350
>>CCDS58467.1 NDRG4 gene_id:65009|Hs108|chr16 (339 aa)
initn: 2000 init1: 1976 opt: 1990 Z-score: 2498.4 bits: 470.7 E(32554): 7.7e-133
Smith-Waterman score: 2256; 96.0% identity (96.3% similar) in 352 aa overlap (1-352:1-339)
10 20 30 40 50 60
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEIT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 KHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 AKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQEELVNNTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQEELVNNTE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 DGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYIAYLKDRRLSGG
::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS58 DGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYM-----------
250 260 270 280
310 320 330 340 350
pF1KA1 AVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 --PSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLGQVNHTMEVSC
290 300 310 320 330
>>CCDS10797.1 NDRG4 gene_id:65009|Hs108|chr16 (371 aa)
initn: 1933 init1: 1909 opt: 1925 Z-score: 2416.2 bits: 455.6 E(32554): 2.9e-128
Smith-Waterman score: 2191; 95.4% identity (95.7% similar) in 348 aa overlap (5-352:38-371)
10 20 30
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAIL
: :::::::::::::::::::::::::::
CCDS10 RFPEEKPLLRGQDATELESSDAFLLAADTDWK-EHDIETPYGLLHVVIRGSPKGNRPAIL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 TYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA1 MLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA1 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDIN
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 LTEAFKYFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTH
::::::::::::::. ::::::::::::::::::::::::::::::::
CCDS10 LTEAFKYFLQGMGYM-------------PSASMTRLARSRTASLTSASSVDGSRPQACTH
310 320 330 340 350
340 350
pF1KA1 SESSEGLGQVNHTMEVSC
::::::::::::::::::
CCDS10 SESSEGLGQVNHTMEVSC
360 370
>>CCDS45500.1 NDRG4 gene_id:65009|Hs108|chr16 (391 aa)
initn: 1933 init1: 1909 opt: 1925 Z-score: 2415.8 bits: 455.7 E(32554): 3.1e-128
Smith-Waterman score: 2191; 95.4% identity (95.7% similar) in 348 aa overlap (5-352:58-391)
10 20 30
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAIL
: :::::::::::::::::::::::::::
CCDS45 RFPEEKPLLRGQDATELESSDAFLLAADTDWK-EHDIETPYGLLHVVIRGSPKGNRPAIL
30 40 50 60 70 80
40 50 60 70 80 90
pF1KA1 TYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAA
90 100 110 120 130 140
100 110 120 130 140 150
pF1KA1 MLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKL
150 160 170 180 190 200
160 170 180 190 200 210
pF1KA1 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDIN
210 220 230 240 250 260
220 230 240 250 260 270
pF1KA1 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
270 280 290 300 310 320
280 290 300 310 320 330
pF1KA1 LTEAFKYFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTH
::::::::::::::. ::::::::::::::::::::::::::::::::
CCDS45 LTEAFKYFLQGMGYM-------------PSASMTRLARSRTASLTSASSVDGSRPQACTH
330 340 350 360 370
340 350
pF1KA1 SESSEGLGQVNHTMEVSC
::::::::::::::::::
CCDS45 SESSEGLGQVNHTMEVSC
380 390
>>CCDS58465.1 NDRG4 gene_id:65009|Hs108|chr16 (357 aa)
initn: 1986 init1: 1909 opt: 1923 Z-score: 2414.0 bits: 455.2 E(32554): 3.9e-128
Smith-Waterman score: 2210; 91.4% identity (91.6% similar) in 370 aa overlap (1-352:1-357)
10 20 30 40
pF1KA1 MPECWDG------------------EHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLN
::::::: :::::::::::::::::::::::::::::::::::
CCDS58 MPECWDGRSQERRLPRVSSTVSPLQEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA1 HKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQH
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA1 FGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 FGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLP
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA1 DTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNA
190 200 210 220 230 240
230 240 250 260 270 280
pF1KA1 KTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYF
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA1 LQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLG
::::::. ::::::::::::::::::::::::::::::::::::::::
CCDS58 LQGMGYM-------------PSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEGLG
310 320 330 340
350
pF1KA1 QVNHTMEVSC
::::::::::
CCDS58 QVNHTMEVSC
350
>>CCDS55999.1 NDRG4 gene_id:65009|Hs108|chr16 (369 aa)
initn: 1986 init1: 1909 opt: 1923 Z-score: 2413.7 bits: 455.2 E(32554): 4e-128
Smith-Waterman score: 2189; 95.9% identity (96.2% similar) in 345 aa overlap (8-352:38-369)
10 20 30
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYH
::::::::::::::::::::::::::::::
CCDS55 VGEGNAGAVKLAGLGDPRWSPGHLLSPGHQEHDIETPYGLLHVVIRGSPKGNRPAILTYH
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 DVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA1 SVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA1 TSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 TVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTE
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 AFKYFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSES
:::::::::::. :::::::::::::::::::::::::::::::::::
CCDS55 AFKYFLQGMGYM-------------PSASMTRLARSRTASLTSASSVDGSRPQACTHSES
310 320 330 340 350
340 350
pF1KA1 SEGLGQVNHTMEVSC
:::::::::::::::
CCDS55 SEGLGQVNHTMEVSC
360
>>CCDS13284.1 NDRG3 gene_id:57446|Hs108|chr20 (363 aa)
initn: 1489 init1: 1036 opt: 1426 Z-score: 1790.1 bits: 339.8 E(32554): 2.2e-93
Smith-Waterman score: 1456; 62.1% identity (80.2% similar) in 364 aa overlap (2-352:14-363)
10 20 30 40
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFN
: : :::::: .:..::.::: ::::::.::::::.::::: :::
CCDS13 MDELQDVQLTEIKPLLNDKEHDIETTHGVVHVTIRGLPKGNRPVILTYHDIGLNHKSCFN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA1 TFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYV
.:::::::::::.::.:::::::::: :: .:: :::.:.:..:: ::: :. :...: .
CCDS13 AFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA1 IGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSH
::::::::::.:..::: :.:::::::.:.:: .::::::::.::::::... : .:.:
CCDS13 IGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLSGLTTNVVDIILAH
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA1 LFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRP--GTVPN-AKTL
:.:::: : .:.:.::..:.. .:: ::::: : ::.::::.:.:: : : .:::
CCDS13 HFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTL
190 200 210 220 230 240
230 240 250 260 270 280
pF1KA1 RCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQG
.: ..::::::.:: ..::::::.:.: .::.::::: ::::::.:::::::::::::::
CCDS13 KCSTLLVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQG
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA1 MGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRP-QACTHSESSEGLGQV
:::: ::::::::::::: : ::.: .: : . . :..:.: .
CCDS13 MGYI-------------PSASMTRLARSRTHS-TSSSLGSGESPFSRSVTSNQSDGTQES
310 320 330 340
350
pF1KA1 ---------NHTMEVSC
..::::::
CCDS13 CESPDVLDRHQTMEVSC
350 360
>>CCDS13285.1 NDRG3 gene_id:57446|Hs108|chr20 (375 aa)
initn: 1483 init1: 1030 opt: 1419 Z-score: 1781.1 bits: 338.1 E(32554): 6.9e-93
Smith-Waterman score: 1449; 62.6% identity (81.0% similar) in 358 aa overlap (8-352:32-375)
10 20 30
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYH
:::::: .:..::.::: ::::::.:::::
CCDS13 DELQDVQLTEIKPLLNDKNGTRNFQDFDCQEHDIETTHGVVHVTIRGLPKGNRPVILTYH
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 DVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLP
:.::::: :::.:::::::::::.::.:::::::::: :: .:: :::.:.:..:: :::
CCDS13 DIGLNHKSCFNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA1 SVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGL
:. :...: .::::::::::.:..::: :.:::::::.:.:: .::::::::.:::::
CCDS13 PVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLSGL
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA1 TSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRP-
:... : .:.: :.:::: : .:.:.::..:.. .:: ::::: : ::.::::.:.::
CCDS13 TTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPI
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 -GTVPN-AKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGK
: : .:::.: ..::::::.:: ..::::::.:.: .::.::::: ::::::.::::
CCDS13 LGQNDNKSKTLKCSTLLVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGK
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 LTEAFKYFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRP-QACT
::::::::::::::: ::::::::::::: : ::.: .: : . .
CCDS13 LTEAFKYFLQGMGYI-------------PSASMTRLARSRTHS-TSSSLGSGESPFSRSV
310 320 330 340
340 350
pF1KA1 HSESSEGLGQV---------NHTMEVSC
:..:.: . ..::::::
CCDS13 TSNQSDGTQESCESPDVLDRHQTMEVSC
350 360 370
>>CCDS34945.1 NDRG1 gene_id:10397|Hs108|chr8 (394 aa)
initn: 1469 init1: 1333 opt: 1374 Z-score: 1724.2 bits: 327.7 E(32554): 1e-89
Smith-Waterman score: 1436; 61.1% identity (85.1% similar) in 342 aa overlap (8-349:34-358)
10 20 30
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYH
:.:::: .: .::.. :.::::::.:::::
CCDS34 EMQDVDLAEVKPLVEKGETITGLLQEFDVQEQDIETLHGSVHVTLCGTPKGNRPVILTYH
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 DVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLP
:.:.::: :.: .::.:::::::.::.:::::::::: ::..:: ::..:::.::: :::
CCDS34 DIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAGYMYPSMDQLAEMLP
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA1 SVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGL
.:.:.::.: .::.:.:::::.:..::: :..::::::.:..: ..::.::::.:.::
CCDS34 GVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKISGW
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA1 TSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPG
:..::: :.::::..::. .:.:.:..:::.: : .: .::.:: : :::::::.:.::
CCDS34 TQALPDMVVSHLFGKEEMQSNVEVVHTYRQHIVNDMNPGNLHLFINAYNSRRDLEIERPM
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 TVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTE
.. ::.::..:::::..:: :.::::::::::: ::.::::: :::::..::.::.:
CCDS34 PGTHTVTLQCPALLVVGDSSPAVDAVVECNSKLDPTKTTLLKMADCGGLPQISQPAKLAE
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 AFKYFLQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSES
:::::.:::::. :::::::: :::::: .:..:.::.: ..:..
CCDS34 AFKYFVQGMGYM-------------PSASMTRLMRSRTASGSSVTSLDGTR----SRSHT
310 320 330 340
340 350
pF1KA1 SEGLGQVNHTMEVSC
::: . .:: :
CCDS34 SEGTRSRSHTSEGTRSRSHTSEGAHLDITPNSGAAGNSAGPKSMEVSC
350 360 370 380 390
>>CCDS9564.1 NDRG2 gene_id:57447|Hs108|chr14 (357 aa)
initn: 1369 init1: 932 opt: 1346 Z-score: 1689.8 bits: 321.2 E(32554): 8.4e-88
Smith-Waterman score: 1457; 63.2% identity (82.2% similar) in 348 aa overlap (9-352:27-357)
10 20 30 40
pF1KA1 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLN
:..::::: . .. :.:: .:::::::::::::
CCDS95 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA1 HKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQH
.: ::. .:.::::::: ..:: ::::::.. :: :: :::.::..::: :.: :.:.
CCDS95 YKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQY
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA1 FGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLP
..:. .::.:::::::.::..:: :: ::::::.:::::.:::.:::: ::.::::..:
CCDS95 LNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA1 DTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNA
. .:.:::::::: .:.::.:.::. : .. : :..:.:: ::.::::...: : .
CCDS95 EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI---
190 200 210 220 230
230 240 250 260 270 280
pF1KA1 KTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYF
::::::::::::.:: ::.::::::::::: :.::::::::: ::.:::::::::::::
CCDS95 -TLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYF
240 250 260 270 280 290
290 300 310 320 330 340
pF1KA1 LQGMGYIAYLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSE-GL
::::::.: :. ::::.::::::::::.::::.: .. : :.::: :
CCDS95 LQGMGYMA-------------SSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT
300 310 320 330 340
350
pF1KA1 ---GQVNHTMEVSC
: .:::::::
CCDS95 LSSGPPGHTMEVSC
350
352 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:50:11 2016 done: Thu Nov 3 10:50:11 2016
Total Scan time: 2.300 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]