(Circular) (Six-base) MAPSORT of: pF1KA1204.seq Check: 5884 from: 1 to: 7445 pF1KA1204 7445 bp With 182 enzymes: SgfI * September 18, 2009 16:59 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 702 2463 4193 702 Size: 1761 1730 3954 Fragments arranged by size: 3954 1761 1730 AccI GT'mk_AC Cuts at: 4483 4483 Size: 7445 Acc65I G'GTAC_C Cuts at: 4461 4461 Size: 7445 AclI AA'CG_TT Cuts at: 7285 7285 Size: 7445 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 497 567 1423 1820 2158 2593 2747 2893 3052 Size: 70 856 397 338 435 154 146 159 Cuts at: 3052 3111 5270 5702 6449 6717 497 Size: 59 2159 432 747 268 1225 Fragments arranged by size: 2159 1225 856 747 435 432 397 338 268 159 154 146 70 59 AflIII A'CryG_T Cuts at: 4797 5901 6878 4797 Size: 1104 977 5364 Fragments arranged by size: 5364 1104 977 AgeI A'CCGG_T Cuts at: 1216 5833 1216 Size: 4617 2828 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 191 223 191 Size: 32 7413 AlwNI CAG_nnn'CTG Cuts at: 135 1168 1756 1798 2085 2340 3029 3600 3646 Size: 1033 588 42 287 255 689 571 46 Cuts at: 3646 3753 3792 4750 6317 135 Size: 107 39 958 1567 1263 Fragments arranged by size: 1567 1263 1033 958 689 588 571 287 255 107 46 42 39 ApaI G_GGCC'C Cuts at: 2183 3398 2183 Size: 1215 6230 ApaLI G'TGCA_C Cuts at: 764 6215 764 Size: 5451 1994 ApoI r'AATT_y Cuts at: 235 448 1194 2649 3054 4449 6798 7054 235 Size: 213 746 1455 405 1395 2349 256 626 Fragments arranged by size: 2349 1455 1395 746 626 405 256 213 AseI AT'TA_AT Cuts at: 20 20 Size: 7445 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 7445 AvaI C'yCGr_G Cuts at: 195 1321 2164 3007 4465 195 Size: 1126 843 843 1458 3175 Fragments arranged by size: 3175 1458 1126 843 843 BamHI G'GATC_C Cuts at: 1425 2268 4470 1425 Size: 843 2202 4400 Fragments arranged by size: 4400 2202 843 BanI G'GyrC_C Cuts at: 630 949 1258 1849 3078 4461 4875 5123 5158 Size: 319 309 591 1229 1383 414 248 35 Cuts at: 5158 630 Size: 2917 Fragments arranged by size: 2917 1383 1229 591 414 319 309 248 35 BanII G_rGCy'C Cuts at: 385 440 1532 1574 1894 1996 2114 2183 3398 Size: 55 1092 42 320 102 118 69 1215 Cuts at: 3398 3769 4459 5489 385 Size: 371 690 1030 2341 Fragments arranged by size: 2341 1215 1092 1030 690 371 320 118 102 69 55 42 BbeI G_GCGC'C Cuts at: 634 1853 4879 5127 634 Size: 1219 3026 248 2952 Fragments arranged by size: 3026 2952 1219 248 BbsI GAAGACnn'nnnn_ Cuts at: 1494 2146 2534 4140 1494 Size: 652 388 1606 4799 Fragments arranged by size: 4799 1606 652 388 BbvCI CC'TCA_GC Cuts at: 1328 4391 1328 Size: 3063 4382 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1558 1592 1635 1669 1558 Size: 34 43 34 7334 Fragments arranged by size: 7334 43 34 34 BciVI GTATCCnnnnn_n' Cuts at: 5343 6104 7445 5343 Size: 761 1341 5343 Fragments arranged by size: 5343 1341 761 BclI T'GATC_A Cuts at: 4965 4965 Size: 7445 BglI GCCn_nnn'nGGC Cuts at: 2362 2362 Size: 7445 BglII A'GATC_T Cuts at: 339 2553 2594 4960 6997 339 Size: 2214 41 2366 2037 787 Fragments arranged by size: 2366 2214 2037 787 41 BlpI GC'TnA_GC Cuts at: 125 4557 125 Size: 4432 3013 Bme1580I G_kGCm'C Cuts at: 768 952 2183 3263 3398 5070 5163 6219 768 Size: 184 1231 1080 135 1672 93 1056 1994 Fragments arranged by size: 1994 1672 1231 1080 1056 184 135 93 BmrI ACTGGGnnnn_n' Cuts at: 2835 3703 4657 4738 5073 7217 2835 Size: 868 954 81 335 2144 3063 Fragments arranged by size: 3063 2144 954 868 335 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 339 2130 2736 2984 3033 5812 339 Size: 1791 606 248 49 2779 1972 Fragments arranged by size: 2779 1972 1791 606 248 49 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 346 799 984 1351 1879 2219 2272 2477 2500 Size: 453 185 367 528 340 53 205 23 Cuts at: 2500 2833 3006 3371 3591 3814 3959 346 Size: 333 173 365 220 223 145 3832 Fragments arranged by size: 3832 528 453 367 365 340 333 223 220 205 185 173 145 53 23 Bpu10I CC'TnA_GC Cuts at: 307 1328 1376 2330 3768 4391 307 Size: 1021 48 954 1438 623 3361 Fragments arranged by size: 3361 1438 1021 954 623 48 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 851 877 991 1798 1908 4621 5500 5992 6290 Size: 26 114 807 110 2713 879 492 298 Cuts at: 6290 851 Size: 2006 Fragments arranged by size: 2713 2006 879 807 492 298 114 110 26 BsaI GGTCTCn'nnnn_ Cuts at: 779 3513 3515 4357 7149 779 Size: 2734 2 842 2792 1075 Fragments arranged by size: 2792 2734 1075 842 2 BsaAI yAC'GTr Cuts at: 4798 4798 Size: 7445 BsaBI GATnn'nnATC Cuts at: 6 4959 6996 6 Size: 4953 2037 455 Fragments arranged by size: 4953 2037 455 BsaHI Gr'CG_yC Cuts at: 631 1850 4876 5124 5826 7322 631 Size: 1219 3026 248 702 1496 754 Fragments arranged by size: 3026 1496 1219 754 702 248 BsaWI w'CCGG_w Cuts at: 1216 1392 1428 1929 4634 5155 5833 6107 6254 Size: 176 36 501 2705 521 678 274 147 Cuts at: 6254 6665 1216 Size: 411 1996 Fragments arranged by size: 2705 1996 678 521 501 411 274 176 147 36 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 448 478 1642 1672 3957 3985 3987 4015 448 Size: 30 1164 30 2285 28 2 28 3878 Fragments arranged by size: 3878 2285 1164 30 30 28 28 2 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 631 1876 1960 2119 2122 2357 2432 2450 2465 Size: 1245 84 159 3 235 75 18 15 Cuts at: 2465 2497 2632 2746 3009 3152 3813 3855 631 Size: 32 135 114 263 143 661 42 4221 Fragments arranged by size: 4221 1245 661 263 235 159 143 135 114 84 75 42 32 18 15 3 BseYI C'CCAG_C Cuts at: 1731 2801 2947 3201 3325 3814 4870 5628 6205 Size: 1070 146 254 124 489 1056 758 577 Cuts at: 6205 6701 1731 Size: 496 2475 Fragments arranged by size: 2475 1070 1056 758 577 496 489 254 146 124 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 251 1653 2326 3352 3926 251 Size: 1402 673 1026 574 3770 Fragments arranged by size: 3770 1402 1026 673 574 BsiEI CG_ry'CG Cuts at: 104 4987 5033 6241 104 Size: 4883 46 1208 1308 Fragments arranged by size: 4883 1308 1208 46 BsiHKAI G_wGCw'C Cuts at: 440 768 1894 2114 2287 3359 3385 3769 4459 Size: 328 1126 220 173 1072 26 384 690 Cuts at: 4459 5237 5427 6219 440 Size: 778 190 792 1666 Fragments arranged by size: 1666 1126 1072 792 778 690 384 328 220 190 173 26 BsmI GAATG_Cn' Cuts at: 1825 2664 3506 1825 Size: 839 842 5764 Fragments arranged by size: 5764 842 839 BsmBI CGTCTCn'nnnn_ Cuts at: 2724 2724 Size: 7445 Bsp1286I G_dGCh'C Cuts at: 385 440 768 952 1532 1574 1894 1996 2114 Size: 55 328 184 580 42 320 102 118 Cuts at: 2114 2183 2287 3263 3359 3385 3398 3769 4459 Size: 69 104 976 96 26 13 371 690 Cuts at: 4459 5070 5163 5237 5427 5489 6219 385 Size: 611 93 74 190 62 730 1611 Fragments arranged by size: 1611 976 730 690 611 580 371 328 320 190 184 118 104 102 96 93 74 69 62 55 42 26 13 BspEI T'CCGG_A Cuts at: 1428 1929 6665 1428 Size: 501 4736 2208 Fragments arranged by size: 4736 2208 501 BspHI T'CATG_A Cuts at: 803 6621 803 Size: 5818 1627 BspMI ACCTGCnnnn'nnnn_ Cuts at: 702 1762 2463 3495 3852 4004 4193 4495 4709 Size: 1060 701 1032 357 152 189 302 214 Cuts at: 4709 5011 5392 702 Size: 302 381 2755 Fragments arranged by size: 2755 1060 1032 701 381 357 302 302 214 189 152 BsrBI CCG'CTC Cuts at: 50 1593 1703 5737 5791 7275 7440 50 Size: 1543 110 4034 54 1484 165 55 Fragments arranged by size: 4034 1543 1484 165 110 55 54 BsrDI GCAATG_nn' Cuts at: 468 681 2795 3449 4030 5357 468 Size: 213 2114 654 581 1327 2556 Fragments arranged by size: 2556 2114 1327 654 581 213 BsrFI r'CCGG_y Cuts at: 794 1216 1255 1261 5443 5624 5833 794 Size: 422 39 6 4182 181 209 2406 Fragments arranged by size: 4182 2406 422 209 181 39 6 BssSI C'ACGA_G Cuts at: 5716 6074 5716 Size: 358 7087 BstAPI GCAn_nnn'nTGC Cuts at: 1631 2340 4822 1631 Size: 709 2482 4254 Fragments arranged by size: 4254 2482 709 BstBI TT'CG_AA Cuts at: 1477 5806 1477 Size: 4329 3116 BstEII G'GTnAC_C Cuts at: 2914 2914 Size: 7445 BstXI CCAn_nnnn'nTGG Cuts at: 846 2250 846 Size: 1404 6041 BstYI r'GATC_y Cuts at: 1 339 1425 2268 2553 2594 3740 3903 4470 Size: 338 1086 843 285 41 1146 163 567 Cuts at: 4470 4937 4960 5295 5541 6553 6639 6651 6997 Size: 467 23 335 246 1012 86 12 346 Cuts at: 6997 1 Size: 449 Fragments arranged by size: 1146 1086 1012 843 567 467 449 346 338 335 285 246 163 86 41 23 12 Bsu36I CC'TnA_GG Cuts at: 643 3118 643 Size: 2475 4970 BtgI C'CryG_G Cuts at: 944 2984 944 Size: 2040 5405 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 5395 5576 5739 5395 Size: 181 163 7101 Fragments arranged by size: 7101 181 163 BtsI GCAGTG_nn' Cuts at: 467 1356 3938 4688 467 Size: 889 2582 750 3224 Fragments arranged by size: 3224 2582 889 750 DraI TTT'AAA Cuts at: 1904 4444 1904 Size: 2540 4905 DraIII CAC_nnn'GTG Cuts at: 378 1631 3389 378 Size: 1253 1758 4434 Fragments arranged by size: 4434 1758 1253 DrdI GACnn_nn'nnGTC Cuts at: 3529 5151 6009 3529 Size: 1622 858 4965 Fragments arranged by size: 4965 1622 858 EaeI y'GGCC_r Cuts at: 881 1711 2048 4350 5030 5204 5595 5622 6967 Size: 830 337 2302 680 174 391 27 1345 Cuts at: 6967 881 Size: 1359 Fragments arranged by size: 2302 1359 1345 830 680 391 337 174 27 EagI C'GGCC_G Cuts at: 5030 5030 Size: 7445 EarI CTCTTCn'nnn_ Cuts at: 217 802 961 1522 1670 1715 1912 2723 2923 Size: 585 159 561 148 45 197 811 200 Cuts at: 2923 3071 3466 5468 5678 217 Size: 148 395 2002 210 1984 Fragments arranged by size: 2002 1984 811 585 561 395 210 200 197 159 148 148 45 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 5653 5963 6109 7255 5653 Size: 310 146 1146 5843 Fragments arranged by size: 5843 1146 310 146 EcoICRI GAG'CTC Cuts at: 438 1892 2112 3767 4457 438 Size: 1454 220 1655 690 3426 Fragments arranged by size: 3426 1655 1454 690 220 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 346 497 567 799 984 1351 1423 1820 1879 Size: 151 70 232 185 367 72 397 59 Cuts at: 1879 2158 2219 2272 2477 2500 2593 2747 2833 Size: 279 61 53 205 23 93 154 86 Cuts at: 2833 2893 3006 3052 3111 3371 3591 3814 3959 Size: 60 113 46 59 260 220 223 145 Cuts at: 3959 5270 5702 6449 6717 346 Size: 1311 432 747 268 1074 Fragments arranged by size: 1311 1074 747 432 397 367 279 268 260 232 223 220 205 185 154 151 145 113 93 86 72 70 61 60 59 59 53 46 23 EcoNI CCTnn'n_nnAGG Cuts at: 479 1172 1837 2608 3229 479 Size: 693 665 771 621 4695 Fragments arranged by size: 4695 771 693 665 621 EcoO109I rG'GnC_Cy Cuts at: 539 2179 2180 2337 2904 3122 3395 3588 3597 Size: 1640 1 157 567 218 273 193 9 Cuts at: 3597 3811 3961 4218 4584 539 Size: 214 150 257 366 3400 Fragments arranged by size: 3400 1640 567 366 273 257 218 214 193 157 150 9 1 EcoRI G'AATT_C Cuts at: 3054 4449 3054 Size: 1395 6050 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 417 2035 5464 417 Size: 1618 3429 2398 Fragments arranged by size: 3429 2398 1618 FspI TGC'GCA Cuts at: 5226 5226 Size: 7445 HaeII r_GCGC'y Cuts at: 634 1376 1558 1853 4879 5127 6149 7128 634 Size: 742 182 295 3026 248 1022 979 951 Fragments arranged by size: 3026 1022 979 951 742 295 248 182 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 168 200 448 480 924 956 1045 1077 1091 Size: 32 248 32 444 32 89 32 14 Cuts at: 1091 1123 1338 1370 1642 1674 1911 1943 1957 Size: 32 215 32 272 32 237 32 14 Cuts at: 1957 1989 2101 2133 2253 2285 2380 2412 2538 Size: 32 112 32 120 32 95 32 126 Cuts at: 2538 2570 3847 3879 4078 4110 5287 5317 5319 Size: 32 1277 32 199 32 1177 30 2 Cuts at: 5319 5349 168 Size: 30 2264 Fragments arranged by size: 2264 1277 1177 444 272 248 237 215 199 126 120 112 95 89 32 32 32 32 32 32 32 32 32 32 32 32 32 32 32 30 30 14 14 2 HincII GTy'rAC Cuts at: 2489 4484 2489 Size: 1995 5450 KasI G'GCGC_C Cuts at: 630 1849 4875 5123 630 Size: 1219 3026 248 2952 Fragments arranged by size: 3026 2952 1219 248 KpnI G_GTAC'C Cuts at: 4465 4465 Size: 7445 MluI A'CGCG_T Cuts at: 6878 6878 Size: 7445 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1155 2494 2903 6116 6300 1155 Size: 1339 409 3213 184 2300 Fragments arranged by size: 3213 2300 1339 409 184 MscI TGG'CCA Cuts at: 883 1713 2050 4352 5206 883 Size: 830 337 2302 854 3122 Fragments arranged by size: 3122 2302 854 830 337 MslI CAynn'nnrTG Cuts at: 1904 3538 5434 5561 1904 Size: 1634 1896 127 3788 Fragments arranged by size: 3788 1896 1634 127 MspA1I CmG'CkG Cuts at: 1401 1731 2571 3029 3661 4376 4395 4556 4870 Size: 330 840 458 632 715 19 161 314 Cuts at: 4870 5230 6243 6488 1401 Size: 360 1013 245 2358 Fragments arranged by size: 2358 1013 840 715 632 458 360 330 314 245 161 19 NaeI GCC'GGC Cuts at: 5626 5626 Size: 7445 NarI GG'CG_CC Cuts at: 631 1850 4876 5124 631 Size: 1219 3026 248 2952 Fragments arranged by size: 3026 2952 1219 248 NcoI C'CATG_G Cuts at: 944 944 Size: 7445 NgoMIV G'CCGG_C Cuts at: 5624 5624 Size: 7445 NspI r_CATG'y Cuts at: 603 3954 4041 4498 4998 5905 603 Size: 3351 87 457 500 907 2143 Fragments arranged by size: 3351 2143 907 500 457 87 PasI CC'CwG_GG Cuts at: 1997 2828 1997 Size: 831 6614 PciI A'CATG_T Cuts at: 5901 5901 Size: 7445 PflMI CCAn_nnn'nTGG Cuts at: 378 714 2031 3600 378 Size: 336 1317 1569 4223 Fragments arranged by size: 4223 1569 1317 336 PfoI T'CCnGG_A Cuts at: 362 512 2536 3906 362 Size: 150 2024 1370 3901 Fragments arranged by size: 3901 2024 1370 150 PmeI GTTT'AAAC Cuts at: 4444 4444 Size: 7445 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 6584 6616 6584 Size: 32 7413 PpuMI rG'GwC_Cy Cuts at: 539 3122 3588 3597 3811 3961 4218 539 Size: 2583 466 9 214 150 257 3766 Fragments arranged by size: 3766 2583 466 257 214 150 9 PspOMI G'GGCC_C Cuts at: 2179 3394 2179 Size: 1215 6230 PstI C_TGCA'G Cuts at: 1658 1752 1988 4492 5177 1658 Size: 94 236 2504 685 3926 Fragments arranged by size: 3926 2504 685 236 94 PvuI CG_AT'CG Cuts at: 104 104 Size: 7445 PvuII CAG'CTG Cuts at: 1401 2571 3029 3661 4376 4870 5230 1401 Size: 1170 458 632 715 494 360 3616 Fragments arranged by size: 3616 1170 715 632 494 458 360 RsrII CG'GwC_CG Cuts at: 5640 5640 Size: 7445 SacI G_AGCT'C Cuts at: 440 1894 2114 3769 4459 440 Size: 1454 220 1655 690 3426 Fragments arranged by size: 3426 1655 1454 690 220 SalI G'TCGA_C Cuts at: 4482 4482 Size: 7445 SanDI GG'GwC_CC Cuts at: 3811 3811 Size: 7445 SapI GCTCTTCn'nnn_ Cuts at: 217 802 5468 5678 217 Size: 585 4666 210 1984 Fragments arranged by size: 4666 1984 585 210 SbfI CC_TGCA'GG Cuts at: 1988 4492 1988 Size: 2504 4941 ScaI AGT'ACT Cuts at: 6962 6962 Size: 7445 SfcI C'TryA_G Cuts at: 33 534 1654 1748 1984 4488 5173 6166 6357 Size: 501 1120 94 236 2504 685 993 191 Cuts at: 6357 33 Size: 1121 Fragments arranged by size: 2504 1121 1120 993 685 501 236 191 94 SfoI GGC'GCC Cuts at: 632 1851 4877 5125 632 Size: 1219 3026 248 2952 Fragments arranged by size: 3026 2952 1219 248 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 7445 SgrAI Cr'CCGG_yG Cuts at: 1216 1216 Size: 7445 SmaI CCC'GGG Cuts at: 1323 4467 1323 Size: 3144 4301 SmlI C'TyrA_G Cuts at: 856 866 970 1777 1887 2164 3007 4600 5515 Size: 10 104 807 110 277 843 1593 915 Cuts at: 5515 6007 6269 856 Size: 492 262 2032 Fragments arranged by size: 2032 1593 915 843 807 492 277 262 110 104 10 SpeI A'CTAG_T Cuts at: 67 67 Size: 7445 SphI G_CATG'C Cuts at: 4498 4998 4498 Size: 500 6945 SspI AAT'ATT Cuts at: 1028 1028 Size: 7445 StuI AGG'CCT Cuts at: 1832 3417 1832 Size: 1585 5860 StyI C'CwwG_G Cuts at: 542 944 1187 1787 4214 4579 4933 542 Size: 402 243 600 2427 365 354 3054 Fragments arranged by size: 3054 2427 600 402 365 354 243 SwaI ATTT'AAAT Cuts at: 1904 1904 Size: 7445 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 2360 2835 3096 3339 3751 4021 4261 5028 5161 Size: 475 261 243 412 270 240 767 133 Cuts at: 5161 5620 5829 2360 Size: 459 209 3976 Fragments arranged by size: 3976 767 475 459 412 270 261 243 240 209 133 TatI w'GTAC_w Cuts at: 2751 3731 6960 2751 Size: 980 3229 3236 Fragments arranged by size: 3236 3229 980 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 876 908 2667 2699 2827 2859 6962 6994 876 Size: 32 1759 32 128 32 4103 32 1327 Fragments arranged by size: 4103 1759 1327 128 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 5242 5242 Size: 7445 XbaI T'CTAG_A Cuts at: 2970 4476 2970 Size: 1506 5939 XcmI CCAnnnn_n'nnnnTGG Cuts at: 3533 4940 3533 Size: 1407 6038 XhoI C'TCGA_G Cuts at: 2164 3007 2164 Size: 843 6602 XmaI C'CCGG_G Cuts at: 1321 4465 1321 Size: 3144 4301 XmnI GAAnn'nnTTC Cuts at: 1408 2378 1408 Size: 970 6475 Enzymes that do cut: AarI AccI Acc65I AclI AcuI AflIII AgeI AloI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BssSI BstAPI BstBI BstEII BstXI BstYI Bsu36I BtgI BtgZI BtsI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NspI PasI PciI PflMI PfoI PmeI PpiI PpuMI PspOMI PstI PvuI PvuII RsrII SacI SalI SanDI SapI SbfI ScaI SfcI SfoI SgfI SgrAI SmaI SmlI SpeI SphI SspI StuI StyI SwaI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI XmnI Enzymes that do not cut: AatII AfeI AflII AhdI AleI AlfI AscI AvrII BaeI BfrBI BmgBI BmtI BsiWI BsrGI BssHII BstZ17I ClaI CspCI EcoRV FseI FspAI HindIII HpaI MfeI NdeI NheI NotI NruI NsiI PacI PmlI PshAI PsiI PspXI PsrI SacII SexAI SfiI SnaBI SrfI ZraI