Result of FASTA (ccds) for
pF1KA1231
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1231, 1061 aa
1>>>pF1KA1231 1061 - 1061 aa - 1061 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.7065+/-0.00112; mu= 3.2680+/- 0.067
mean_var=325.7032+/-67.888, 0's: 0 Z-trim(113.4): 780 B-trim: 772 in 1/50
Lambda= 0.071066
statistics sampled from 13156 (14037) to 13156 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.431), width: 16
Scan time: 5.490
The best scores are: opt bits E(32554)
CCDS44772.1 PRDM10 gene_id:56980|Hs108|chr11 (1061) 7290 762.3 0
CCDS44771.1 PRDM10 gene_id:56980|Hs108|chr11 (1160) 6238 654.5 3.8e-187
CCDS8484.1 PRDM10 gene_id:56980|Hs108|chr11 (1156) 6197 650.3 7e-186
CCDS8485.1 PRDM10 gene_id:56980|Hs108|chr11 (1023) 5983 628.3 2.6e-179
CCDS35235.1 ZNF182 gene_id:7569|Hs108|chrX ( 620) 516 67.5 1e-10
>>CCDS44772.1 PRDM10 gene_id:56980|Hs108|chr11 (1061 aa)
initn: 7290 init1: 7290 opt: 7290 Z-score: 4056.7 bits: 762.3 E(32554): 0
Smith-Waterman score: 7290; 100.0% identity (100.0% similar) in 1061 aa overlap (1-1061:1-1061)
10 20 30 40 50 60
pF1KA1 MSAYSVPSTFAQASLPVHNQVLPSIESVDGSDPLATLQTPLGRLEAKEEEDEDEDEDTEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MSAYSVPSTFAQASLPVHNQVLPSIESVDGSDPLATLQTPLGRLEAKEEEDEDEDEDTEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 DEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPVLTRARA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPVLTRARA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 SLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 ASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 TRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKSDDGTQDLLHFPTKEQFDEAEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKSDDGTQDLLHFPTKEQFDEAEPA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHLQPQHEESVVPTQSTLTADDMRRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHLQPQHEESVVPTQSTLTADDMRRA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 KRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCN
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 KGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 DFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDK
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 LREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHL
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 SKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 LRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLSNT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 IHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQY
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 IPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTVDVGQLHDPQPYPQHAIQVQHIQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTVDVGQLHDPQPYPQHAIQVQHIQV
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 SGQPLSPSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SGQPLSPSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYS
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 SEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQV
970 980 990 1000 1010 1020
1030 1040 1050 1060
pF1KA1 EPPAHSDSLDPQTNSQQQTTQYIITTTTNGNGSSEVHITKP
:::::::::::::::::::::::::::::::::::::::::
CCDS44 EPPAHSDSLDPQTNSQQQTTQYIITTTTNGNGSSEVHITKP
1030 1040 1050 1060
>>CCDS44771.1 PRDM10 gene_id:56980|Hs108|chr11 (1160 aa)
initn: 6272 init1: 6186 opt: 6238 Z-score: 3473.3 bits: 654.5 E(32554): 3.8e-187
Smith-Waterman score: 7188; 98.5% identity (98.6% similar) in 1067 aa overlap (8-1061:94-1160)
10 20 30
pF1KA1 MSAYSVPSTFAQASLPVHNQVLPSIESVDGSDPLATL
.: ::::::::::::::::::::::::::
CCDS44 PEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIESVDGSDPLATL
70 80 90 100 110 120
40 50 60 70 80 90
pF1KA1 QTPLGRLEAKEEEDEDEDEDTEEDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QTPLGRLEAKEEEDEDEDEDTEEDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHA
130 140 150 160 170 180
100 110 120 130 140 150
pF1KA1 SVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRG
190 200 210 220 230 240
160 170 180 190 200 210
pF1KA1 SELKDCYIHLKVSLDKGDRKERDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SELKDCYIHLKVSLDKGDRKERDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQY
250 260 270 280 290 300
220 230 240 250 260 270
pF1KA1 GHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRR
310 320 330 340 350 360
280 290 300 310 320 330
pF1KA1 FISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEK
370 380 390 400 410 420
340 350 360 370 380 390
pF1KA1 SDDGTQDLLHFPTKEQFDEAEPATLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SDDGTQDLLHFPTKEQFDEAEPATLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHL
430 440 450 460 470 480
400 410 420 430 440 450
pF1KA1 QPQHEESVVPTQSTLTADDMRRAKRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QPQHEESVVPTQSTLTADDMRRAKRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKD
490 500 510 520 530 540
460 470 480 490 500 510
pF1KA1 KLDQHLRFHGREGNCPLTCDLCNKGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KLDQHLRFHGREGNCPLTCDLCNKGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLL
550 560 570 580 590 600
520 530 540 550 560 570
pF1KA1 KDHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KDHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHM
610 620 630 640 650 660
580 590 600 610 620 630
pF1KA1 LRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYD
670 680 690 700 710 720
640 650 660 670 680 690
pF1KA1 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKS
730 740 750 760 770 780
700 710 720 730 740 750
pF1KA1 ASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQY
790 800 810 820 830 840
760 770 780 790 800 810
pF1KA1 SSKTKMVQHIRKKHPEFAQLSNTIHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SSKTKMVQHIRKKHPEFAQLSNTIHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAM
850 860 870 880 890 900
820 830 840 850 860 870
pF1KA1 TELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTV
910 920 930 940 950 960
880 890 900 910 920
pF1KA1 DVGQLHDPQPYPQHAIQVQHIQVS-------------GQPLSPSAQQAQQGLSPSHIQGS
:::::::::::::::::::::::: :::::::::::::::::::::::
CCDS44 DVGQLHDPQPYPQHAIQVQHIQVSEPTASAPSSAQVSGQPLSPSAQQAQQGLSPSHIQGS
970 980 990 1000 1010 1020
930 940 950 960 970 980
pF1KA1 SSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPV
1030 1040 1050 1060 1070 1080
990 1000 1010 1020 1030 1040
pF1KA1 TTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQVEPPAHSDSLDPQTNSQQQTTQYII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQVEPPAHSDSLDPQTNSQQQTTQYII
1090 1100 1110 1120 1130 1140
1050 1060
pF1KA1 TTTTNGNGSSEVHITKP
:::::::::::::::::
CCDS44 TTTTNGNGSSEVHITKP
1150 1160
>>CCDS8484.1 PRDM10 gene_id:56980|Hs108|chr11 (1156 aa)
initn: 3921 init1: 3286 opt: 6197 Z-score: 3450.6 bits: 650.3 E(32554): 7e-186
Smith-Waterman score: 7147; 98.1% identity (98.2% similar) in 1067 aa overlap (8-1061:94-1156)
10 20 30
pF1KA1 MSAYSVPSTFAQASLPVHNQVLPSIESVDGSDPLATL
.: ::::::::::::::::::::::::::
CCDS84 PEHTLVYIHPVEAAQTLFTDPGQVAYVQQDATAQQASLPVHNQVLPSIESVDGSDPLATL
70 80 90 100 110 120
40 50 60 70 80 90
pF1KA1 QTPLGRLEAKEEEDEDEDEDTEEDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 QTPLGRLEAKEEEDEDEDEDTEEDEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHA
130 140 150 160 170 180
100 110 120 130 140 150
pF1KA1 SVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SVCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRG
190 200 210 220 230 240
160 170 180 190 200 210
pF1KA1 SELKDCYIHLKVSLDKGDRKERDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SELKDCYIHLKVSLDKGDRKERDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQY
250 260 270 280 290 300
220 230 240 250 260 270
pF1KA1 GHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 GHHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRR
310 320 330 340 350 360
280 290 300 310 320 330
pF1KA1 FISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 FISSEQLQQHLNSHDEKLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEK
370 380 390 400 410 420
340 350 360 370 380 390
pF1KA1 SDDGTQDLLHFPTKEQFDEAEPATLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SDDGTQDLLHFPTKEQFDEAEPATLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHL
430 440 450 460 470 480
400 410 420 430 440 450
pF1KA1 QPQHEESVVPTQSTLTADDMRRAKRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKD
::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
CCDS84 QPQHEESVVPTQSTLTADDMRRAKRIR----NAALQHLFIRKSFRPFKCLQCGKAFREKD
490 500 510 520 530
460 470 480 490 500 510
pF1KA1 KLDQHLRFHGREGNCPLTCDLCNKGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 KLDQHLRFHGREGNCPLTCDLCNKGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLL
540 550 560 570 580 590
520 530 540 550 560 570
pF1KA1 KDHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 KDHVAIHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHM
600 610 620 630 640 650
580 590 600 610 620 630
pF1KA1 LRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 LRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYD
660 670 680 690 700 710
640 650 660 670 680 690
pF1KA1 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SFTFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKS
720 730 740 750 760 770
700 710 720 730 740 750
pF1KA1 ASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 ASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQY
780 790 800 810 820 830
760 770 780 790 800 810
pF1KA1 SSKTKMVQHIRKKHPEFAQLSNTIHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SSKTKMVQHIRKKHPEFAQLSNTIHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAM
840 850 860 870 880 890
820 830 840 850 860 870
pF1KA1 TELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 TELSQTLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTV
900 910 920 930 940 950
880 890 900 910 920
pF1KA1 DVGQLHDPQPYPQHAIQVQHIQVS-------------GQPLSPSAQQAQQGLSPSHIQGS
:::::::::::::::::::::::: :::::::::::::::::::::::
CCDS84 DVGQLHDPQPYPQHAIQVQHIQVSEPTASAPSSAQVSGQPLSPSAQQAQQGLSPSHIQGS
960 970 980 990 1000 1010
930 940 950 960 970 980
pF1KA1 SSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPV
1020 1030 1040 1050 1060 1070
990 1000 1010 1020 1030 1040
pF1KA1 TTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQVEPPAHSDSLDPQTNSQQQTTQYII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 TTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQVEPPAHSDSLDPQTNSQQQTTQYII
1080 1090 1100 1110 1120 1130
1050 1060
pF1KA1 TTTTNGNGSSEVHITKP
:::::::::::::::::
CCDS84 TTTTNGNGSSEVHITKP
1140 1150
>>CCDS8485.1 PRDM10 gene_id:56980|Hs108|chr11 (1023 aa)
initn: 6053 init1: 3035 opt: 5983 Z-score: 3332.7 bits: 628.3 E(32554): 2.6e-179
Smith-Waterman score: 6931; 96.4% identity (96.4% similar) in 1061 aa overlap (1-1061:1-1023)
10 20 30 40 50 60
pF1KA1 MSAYSVPSTFAQASLPVHNQVLPSIESVDGSDPLATLQTPLGRLEAKEEEDEDEDEDTEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 MSAYSVPSTFAQASLPVHNQVLPSIESVDGSDPLATLQTPLGRLEAKEEEDEDEDEDTEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 DEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPVLTRARA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 DEEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPVLTRARA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 SLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 LHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 ASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 ASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLDVFSR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 TRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKSDDGTQDLLHFPTKEQFDEAEPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 TRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKSDDGTQDLLHFPTKEQFDEAEPA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHLQPQHEESVVPTQSTLTADDMRRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 TLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHLQPQHEESVVPTQSTLTADDMRRA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 KRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCN
:::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 KRIR----NAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCN
430 440 450 460 470
490 500 510 520 530 540
pF1KA1 KGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 KGFISSTSLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFP
480 490 500 510 520 530
550 560 570 580 590 600
pF1KA1 DFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 DFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDK
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA1 LREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 LREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRGMLVNHL
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA1 SKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRK
660 670 680 690 700 710
730 740 750 760 770 780
pF1KA1 LRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 LRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLSNT
720 730 740 750 760 770
790 800 810 820 830 840
pF1KA1 IHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 IHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQY
780 790 800 810 820 830
850 860 870 880 890 900
pF1KA1 IPVSQSASGLQQPQHIQLQVVQVASATSPHQSQQSTVDVGQLHDPQPYPQHAIQVQHIQV
::::::::::::::::::::::::: :
CCDS84 IPVSQSASGLQQPQHIQLQVVQVAS----------------------------------V
840 850 860
910 920 930 940 950 960
pF1KA1 SGQPLSPSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SGQPLSPSAQQAQQGLSPSHIQGSSSTQGQALQQQQQQQQNSSVQHTYLPSAWNSFRGYS
870 880 890 900 910 920
970 980 990 1000 1010 1020
pF1KA1 SEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 SEIQMMTLPPGQFVITDSGVATPVTTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQV
930 940 950 960 970 980
1030 1040 1050 1060
pF1KA1 EPPAHSDSLDPQTNSQQQTTQYIITTTTNGNGSSEVHITKP
:::::::::::::::::::::::::::::::::::::::::
CCDS84 EPPAHSDSLDPQTNSQQQTTQYIITTTTNGNGSSEVHITKP
990 1000 1010 1020
>>CCDS35235.1 ZNF182 gene_id:7569|Hs108|chrX (620 aa)
initn: 846 init1: 239 opt: 516 Z-score: 306.1 bits: 67.5 E(32554): 1e-10
Smith-Waterman score: 547; 30.3% identity (55.1% similar) in 350 aa overlap (434-768:261-599)
410 420 430 440 450 460
pF1KA1 SVVPTQSTLTADDMRRAKRIRLELQNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHL
:: . . :::.: .::::::::. . :
CCDS35 IVHWRTHTGEKPFGCTECGKAFSQKSQLIIHLRTHTGERPFECPECGKAFREKSTVIIHY
240 250 260 270 280 290
470 480 490 500 510 520
pF1KA1 RFHGREGNCPLTCDLCNKGFISSTSLESHMKLHSDQKTYSCIFCPESF-DRLDLLKDHVA
: : :. : :. :.:.: ....: :.: :. .::: : : ::: ..:::. : .
CCDS35 RTH--TGEKPYECNECGKAFTQKSNLIVHQKTHTGEKTYECTKCGESFIQKLDLIIHH-S
300 310 320 330 340
530 540 550 560 570 580
pF1KA1 IHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSD
: . : ::: : : . : :. .:: ..:::: :.: . . : .:. :.
CCDS35 THTGKKPHECNECKKTFSDKSTLIIHQRTHTGEKPHKCTECGKSFNEKSTLIVHQRTHTG
350 360 370 380 390 400
590 600 610 620 630 640
pF1KA1 RKDFLCSTCGKQFKRKDKLREHMQRMHNPER--EAKKADRISRSKTFKPRITSTDYDSFT
.: . :..::: : .:..: : :: :. :. : .. .. .:..
CCDS35 EKPYECDVCGKTFTQKSNLGVH-QRTHSGEKPFECNECEKAFSQKSYLMLHQRGHTGEKP
410 420 430 440 450 460
650 660 670 680
pF1KA1 FKCRLCMMGFRRRGMLVNHLSKRHPDMK----------IEEVPELTLP--IIKPNRDYFC
..: : .: ....:. : .. : . : ..: .: . : .. : :
CCDS35 YECNECEKAFSQKSYLIIH-QRTHTEEKPYKCNECGKAFREKSKLIIHQRIHTGEKPYEC
470 480 490 500 510 520
690 700 710 720 730 740
pF1KA1 QYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPV
: :.... :. : ..: : : : . . : . . : : : : . :
CCDS35 PVCWKAFSQKSQLIIH-QRTHTG-EKPYACTE---CGKAFREKSTFTVHQRTHT-GEKPY
530 540 550 560 570
750 760 770 780 790 800
pF1KA1 CCPHCSKQYSSKTKMVQHIRKKHPEFAQLSNTIHTPLTTAVISATPAVLTTDSATGETVV
: .:.: ...:.... : :
CCDS35 KCTECGKAFTQKSNLIVHQRTHAGKKAHGRGHTRKSKFMAH
580 590 600 610 620
1061 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:52:14 2016 done: Thu Nov 3 10:52:15 2016
Total Scan time: 5.490 Total Display time: 0.240
Function used was FASTA [36.3.4 Apr, 2011]