Result of FASTA (ccds) for
pF1KA1248
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1248, 357 aa
1>>>pF1KA1248 357 - 357 aa - 357 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6429+/-0.000794; mu= 14.5925+/- 0.048
mean_var=65.9465+/-13.089, 0's: 0 Z-trim(108.3): 19 B-trim: 578 in 1/52
Lambda= 0.157935
statistics sampled from 10090 (10108) to 10090 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.31), width: 16
Scan time: 1.920
The best scores are: opt bits E(32554)
CCDS9564.1 NDRG2 gene_id:57447|Hs108|chr14 ( 357) 2394 554.1 6.7e-158
CCDS61386.1 NDRG2 gene_id:57447|Hs108|chr14 ( 367) 2394 554.1 6.8e-158
CCDS9565.1 NDRG2 gene_id:57447|Hs108|chr14 ( 371) 2239 518.8 3e-147
CCDS73613.1 NDRG2 gene_id:57447|Hs108|chr14 ( 341) 1749 407.1 1.1e-113
CCDS61384.1 NDRG2 gene_id:57447|Hs108|chr14 ( 360) 1516 354.0 1.1e-97
CCDS10797.1 NDRG4 gene_id:65009|Hs108|chr16 ( 371) 1497 349.7 2.3e-96
CCDS45500.1 NDRG4 gene_id:65009|Hs108|chr16 ( 391) 1497 349.7 2.4e-96
CCDS55999.1 NDRG4 gene_id:65009|Hs108|chr16 ( 369) 1496 349.5 2.7e-96
CCDS58465.1 NDRG4 gene_id:65009|Hs108|chr16 ( 357) 1493 348.8 4.2e-96
CCDS58467.1 NDRG4 gene_id:65009|Hs108|chr16 ( 339) 1492 348.5 4.7e-96
CCDS13284.1 NDRG3 gene_id:57446|Hs108|chr20 ( 363) 1357 317.8 9.1e-87
CCDS13285.1 NDRG3 gene_id:57446|Hs108|chr20 ( 375) 1349 316.0 3.3e-86
CCDS58466.1 NDRG4 gene_id:65009|Hs108|chr16 ( 352) 1346 315.3 5e-86
CCDS34945.1 NDRG1 gene_id:10397|Hs108|chr8 ( 394) 1339 313.7 1.7e-85
CCDS59113.1 NDRG1 gene_id:10397|Hs108|chr8 ( 328) 1183 278.1 7.2e-75
CCDS59112.1 NDRG1 gene_id:10397|Hs108|chr8 ( 313) 1105 260.4 1.5e-69
>>CCDS9564.1 NDRG2 gene_id:57447|Hs108|chr14 (357 aa)
initn: 2394 init1: 2394 opt: 2394 Z-score: 2948.3 bits: 554.1 E(32554): 6.7e-158
Smith-Waterman score: 2394; 100.0% identity (100.0% similar) in 357 aa overlap (1-357:1-357)
10 20 30 40 50 60
pF1KA1 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 YKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 YKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 LNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 CPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 CPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGM
250 260 270 280 290 300
310 320 330 340 350
pF1KA1 GYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVSC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 GYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVSC
310 320 330 340 350
>>CCDS61386.1 NDRG2 gene_id:57447|Hs108|chr14 (367 aa)
initn: 2394 init1: 2394 opt: 2394 Z-score: 2948.1 bits: 554.1 E(32554): 6.8e-158
Smith-Waterman score: 2394; 100.0% identity (100.0% similar) in 357 aa overlap (1-357:11-367)
10 20 30 40 50
pF1KA1 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPA
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 MENGGSMQATMAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA1 ILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 ILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA1 ADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 ADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAH
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA1 KLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLN
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA1 FERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 FERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLT
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA1 EAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 EAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPG
310 320 330 340 350 360
pF1KA1 HTMEVSC
:::::::
CCDS61 HTMEVSC
>>CCDS9565.1 NDRG2 gene_id:57447|Hs108|chr14 (371 aa)
initn: 2239 init1: 2239 opt: 2239 Z-score: 2757.2 bits: 518.8 E(32554): 3e-147
Smith-Waterman score: 2356; 96.2% identity (96.2% similar) in 371 aa overlap (1-357:1-371)
10 20 30 40
pF1KA1 MAELQEVQITEEKPLLPGQTPEAAK--------------THSVETPYGSVTFTVYGTPKP
::::::::::::::::::::::::: :::::::::::::::::::::
CCDS95 MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA1 KRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 KRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA1 LDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 LDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA1 WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNR
190 200 210 220 230 240
230 240 250 260 270 280
pF1KA1 RDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 RDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQP
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA1 GKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 GKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSS
310 320 330 340 350 360
350
pF1KA1 GPPGHTMEVSC
:::::::::::
CCDS95 GPPGHTMEVSC
370
>>CCDS73613.1 NDRG2 gene_id:57447|Hs108|chr14 (341 aa)
initn: 1767 init1: 1744 opt: 1749 Z-score: 2154.4 bits: 407.1 E(32554): 1.1e-113
Smith-Waterman score: 2246; 95.5% identity (95.5% similar) in 357 aa overlap (1-357:1-341)
10 20 30 40 50 60
pF1KA1 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 YKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 YKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 CPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGM
::::::::::::::::: :::::::::::::::::::::::::::
CCDS73 CPVMLVVGDQAPHEDAV----------------MADSGGQPQLTQPGKLTEAFKYFLQGM
250 260 270 280
310 320 330 340 350
pF1KA1 GYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVSC
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVSC
290 300 310 320 330 340
>>CCDS61384.1 NDRG2 gene_id:57447|Hs108|chr14 (360 aa)
initn: 1539 init1: 1516 opt: 1516 Z-score: 1867.1 bits: 354.0 E(32554): 1.1e-97
Smith-Waterman score: 2247; 93.3% identity (93.3% similar) in 371 aa overlap (1-357:1-360)
10 20 30 40
pF1KA1 MAELQEVQITEEKPLLPGQTPEAAK--------------THSVETPYGSVTFTVYGTPKP
::::::::::::::::::::::::: :::::::::::::::::::::
CCDS61 MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKP
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA1 KRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA1 LDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA1 WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNR
190 200 210 220 230 240
230 240 250 260 270 280
pF1KA1 RDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQP
::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS61 RDLNFERGGDITLRCPVMLVV-----------ECNSKLDPTQTSFLKMADSGGQPQLTQP
250 260 270 280
290 300 310 320 330 340
pF1KA1 GKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 GKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSS
290 300 310 320 330 340
350
pF1KA1 GPPGHTMEVSC
:::::::::::
CCDS61 GPPGHTMEVSC
350 360
>>CCDS10797.1 NDRG4 gene_id:65009|Hs108|chr16 (371 aa)
initn: 1531 init1: 937 opt: 1497 Z-score: 1843.5 bits: 349.7 E(32554): 2.3e-96
Smith-Waterman score: 1534; 62.7% identity (81.1% similar) in 375 aa overlap (1-357:1-371)
10 20 30 40
pF1KA1 MAELQEVQITEEKPLLPGQTPE----------AA----KTHSVETPYGSVTFTVYGTPKP
:: :::... :::::: :: :: : :..::::: . .. :.::
CCDS10 MAGLQELRFPEEKPLLRGQDATELESSDAFLLAADTDWKEHDIETPYGLLHVVIRGSPKG
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA1 KRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPS
.:::::::::::::.: ::. .:.::::::: ..:: ::::::.. :: :: :::.::
CCDS10 NRPAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA1 LDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMD
..::: :.: :.:...:. .::.:::::::.::..:: :: ::::::.:::::.:::.:
CCDS10 MEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWID
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA1 WAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNR
::: ::.::::..:. .:.:::::::: .:.::.:.::. : .. : :..:.:: ::.:
CCDS10 WAATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSR
190 200 210 220 230 240
230 240 250 260 270 280
pF1KA1 RDLNFERGGDI----TLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQ
:::...: : . ::::::::::::.:: ::.::::::::::: :.::::::::: ::
CCDS10 RDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQ
250 260 270 280 290 300
290 300 310 320 330 340
pF1KA1 LTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESG
.:::::::::::::::::::: :. ::::.::::::::::.::::.: .. : :.:::.
CCDS10 VTQPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEG-
310 320 330 340 350
350
pF1KA1 TLSSGPPGHTMEVSC
: .:::::::
CCDS10 ---LGQVNHTMEVSC
360 370
>>CCDS45500.1 NDRG4 gene_id:65009|Hs108|chr16 (391 aa)
initn: 1531 init1: 937 opt: 1497 Z-score: 1843.1 bits: 349.7 E(32554): 2.4e-96
Smith-Waterman score: 1534; 62.7% identity (81.1% similar) in 375 aa overlap (1-357:21-391)
10 20
pF1KA1 MAELQEVQITEEKPLLPGQTPE----------AA----KT
:: :::... :::::: :: :: :
CCDS45 MKVLGHRLELLTGLLLHDVTMAGLQELRFPEEKPLLRGQDATELESSDAFLLAADTDWKE
10 20 30 40 50 60
30 40 50 60 70 80
pF1KA1 HSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHV
:..::::: . .. :.:: .:::::::::::::.: ::. .:.::::::: ..:: ::
CCDS45 HDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHV
70 80 90 100 110 120
90 100 110 120 130 140
pF1KA1 DAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHP
::::.. :: :: :::.::..::: :.: :.:...:. .::.:::::::.::..:: :
CCDS45 DAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFP
130 140 150 160 170 180
150 160 170 180 190 200
pF1KA1 DTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNI
: ::::::.:::::.:::.:::: ::.::::..:. .:.:::::::: .:.::.:.::.
CCDS45 DLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQ
190 200 210 220 230 240
210 220 230 240 250 260
pF1KA1 ITHAPNLDNIELYWNSYNNRRDLNFERGGDI----TLRCPVMLVVGDQAPHEDAVVECNS
: .. : :..:.:: ::.::::...: : . ::::::::::::.:: ::.::::::
CCDS45 IGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNS
250 260 270 280 290 300
270 280 290 300 310 320
pF1KA1 KLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSA
::::: :.::::::::: ::.:::::::::::::::::::: :. ::::.::::::::::
CCDS45 KLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSA
310 320 330 340 350 360
330 340 350
pF1KA1 ASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVSC
.::::.: .. : :.:::. : .:::::::
CCDS45 SSVDGSRPQACTHSESSEG----LGQVNHTMEVSC
370 380 390
>>CCDS55999.1 NDRG4 gene_id:65009|Hs108|chr16 (369 aa)
initn: 1463 init1: 933 opt: 1496 Z-score: 1842.3 bits: 349.5 E(32554): 2.7e-96
Smith-Waterman score: 1496; 64.3% identity (84.1% similar) in 347 aa overlap (17-357:28-369)
10 20 30 40
pF1KA1 MAELQEVQITEEKPLLPGQ--TPEAAKTHSVETPYGSVTFTVYGTPKPK
::. .: . . :..::::: . .. :.:: .
CCDS55 MPECWDGVGEGNAGAVKLAGLGDPRWSPGHLLSP-GHQEHDIETPYGLLHVVIRGSPKGN
10 20 30 40 50
50 60 70 80 90 100
pF1KA1 RPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSL
:::::::::::::.: ::. .:.::::::: ..:: ::::::.. :: :: :::.::.
CCDS55 RPAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSM
60 70 80 90 100 110
110 120 130 140 150 160
pF1KA1 DQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDW
.::: :.: :.:...:. .::.:::::::.::..:: :: ::::::.:::::.:::.::
CCDS55 EQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDW
120 130 140 150 160 170
170 180 190 200 210 220
pF1KA1 AAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRR
:: ::.::::..:. .:.:::::::: .:.::.:.::. : .. : :..:.:: ::.::
CCDS55 AATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRR
180 190 200 210 220 230
230 240 250 260 270 280
pF1KA1 DLNFERGGDI----TLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQL
::...: : . ::::::::::::.:: ::.::::::::::: :.::::::::: ::.
CCDS55 DLDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KA1 TQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGT
:::::::::::::::::::: :. ::::.::::::::::.::::.: .. : :.::: :
CCDS55 TQPGKLTEAFKYFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSE-GL
300 310 320 330 340 350
350
pF1KA1 LSSGPPGHTMEVSC
: .:::::::
CCDS55 ---GQVNHTMEVSC
360
>>CCDS58465.1 NDRG4 gene_id:65009|Hs108|chr16 (357 aa)
initn: 1463 init1: 933 opt: 1493 Z-score: 1838.8 bits: 348.8 E(32554): 4.2e-96
Smith-Waterman score: 1493; 65.0% identity (84.9% similar) in 337 aa overlap (25-357:25-357)
10 20 30 40 50 60
pF1KA1 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLN
. :..::::: . .. :.:: .:::::::::::::
CCDS58 MPECWDGRSQERRLPRVSSTVSPLQEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 YKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQY
.: ::. .:.::::::: ..:: ::::::.. :: :: :::.::..::: :.: :.:.
CCDS58 HKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP
..:. .::.:::::::.::..:: :: ::::::.:::::.:::.:::: ::.::::..:
CCDS58 FGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLP
130 140 150 160 170 180
190 200 210 220 230
pF1KA1 EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI---
. .:.:::::::: .:.::.:.::. : .. : :..:.:: ::.::::...: : .
CCDS58 DTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA1 -TLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYF
::::::::::::.:: ::.::::::::::: :.::::::::: ::.:::::::::::::
CCDS58 KTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYF
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA1 LQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVS
::::::: :. ::::.::::::::::.::::.: .. : :.:::. : .::::::
CCDS58 LQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEG----LGQVNHTMEVS
310 320 330 340 350
pF1KA1 C
:
CCDS58 C
>>CCDS58467.1 NDRG4 gene_id:65009|Hs108|chr16 (339 aa)
initn: 1462 init1: 932 opt: 1492 Z-score: 1837.9 bits: 348.5 E(32554): 4.7e-96
Smith-Waterman score: 1492; 65.4% identity (85.1% similar) in 335 aa overlap (27-357:9-339)
10 20 30 40 50 60
pF1KA1 MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLN
:..::::: . .. :.:: .:::::::::::::
CCDS58 MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLN
10 20 30 40
70 80 90 100 110 120
pF1KA1 YKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQY
.: ::. .:.::::::: ..:: ::::::.. :: :: :::.::..::: :.: :.:.
CCDS58 HKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFPQGYQFPSMEQLAAMLPSVVQH
50 60 70 80 90 100
130 140 150 160 170 180
pF1KA1 LNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIP
..:. .::.:::::::.::..:: :: ::::::.:::::.:::.:::: ::.::::..:
CCDS58 FGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDPNGKGWIDWAATKLSGLTSTLP
110 120 130 140 150 160
190 200 210 220 230
pF1KA1 EMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI---
. .:.:::::::: .:.::.:.::. : .. : :..:.:: ::.::::...: : .
CCDS58 DTVLSHLFSQEELVNNTELVQSYRQQIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KA1 -TLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYF
::::::::::::.:: ::.::::::::::: :.::::::::: ::.:::::::::::::
CCDS58 KTLRCPVMLVVGDNAPAEDGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFKYF
230 240 250 260 270 280
300 310 320 330 340 350
pF1KA1 LQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVS
::::::: :. ::::.::::::::::.::::.: .. : :.:::. : .::::::
CCDS58 LQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQACTHSESSEG----LGQVNHTMEVS
290 300 310 320 330
pF1KA1 C
:
CCDS58 C
357 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 20:50:46 2016 done: Wed Nov 2 20:50:46 2016
Total Scan time: 1.920 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]