Result of FASTA (omim) for
pF1KA1287
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1287, 1204 aa
1>>>pF1KA1287 1204 - 1204 aa - 1204 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5154+/-0.000506; mu= 20.8340+/- 0.032
mean_var=63.7926+/-12.907, 0's: 0 Z-trim(107.7): 26 B-trim: 212 in 2/49
Lambda= 0.160579
statistics sampled from 15729 (15745) to 15729 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.527), E-opt: 0.2 (0.185), width: 16
Scan time: 16.970
The best scores are: opt bits E(85289)
NP_065799 (OMIM: 611346) integrator complex subuni (1204) 7837 1825.4 0
NP_001317346 (OMIM: 611346) integrator complex sub (1196) 7787 1813.8 0
XP_011523360 (OMIM: 611346) PREDICTED: integrator (1196) 7778 1811.8 0
>>NP_065799 (OMIM: 611346) integrator complex subunit 2 (1204 aa)
initn: 7837 init1: 7837 opt: 7837 Z-score: 9800.3 bits: 1825.4 E(85289): 0
Smith-Waterman score: 7837; 100.0% identity (100.0% similar) in 1204 aa overlap (1-1204:1-1204)
10 20 30 40 50 60
pF1KA1 MKDQQTVIMTECTSLQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRMALCAPADQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MKDQQTVIMTECTSLQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRMALCAPADQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 SQSWAQDKKLILRLLSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLGGGSGESILVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SQSWAQDKKLILRLLSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLGGGSGESILVS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 QLQHGLTLEFEHSDSPRRLRLVLSELLAIMNKVSESNGEFFFKSSELFESPVYLEEAADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QLQHGLTLEFEHSDSPRRLRLVLSELLAIMNKVSESNGEFFFKSSELFESPVYLEEAADV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LCILQAELPSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEVCRGLIKNGERQDEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LCILQAELPSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEVCRGLIKNGERQDEES
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LGGRRRTDALRFLCKMNPSQALKVRGMVVEECHLPGLGVALTLDHTKNEACEDGVSDLVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LGGRRRTDALRFLCKMNPSQALKVRGMVVEECHLPGLGVALTLDHTKNEACEDGVSDLVC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 FVSGLLLGTNAKVRTWFGTFIRNGQQRKRETSSSVLWQMRRQLLLELMGILPTVRSTRIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 FVSGLLLGTNAKVRTWFGTFIRNGQQRKRETSSSVLWQMRRQLLLELMGILPTVRSTRIV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 EEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAGLKPTEEEAEQLLQLMTSRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAGLKPTEEEAEQLLQLMTSRPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 ATPAGVRFVSLSFCMLLAFSTLVSTPEQEQLMVVWLSWMIKEEAYFESTSGVSASFGEML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ATPAGVRFVSLSFCMLLAFSTLVSTPEQEQLMVVWLSWMIKEEAYFESTSGVSASFGEML
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 LLVAMYFHSNQLSAIIDLVCSTLGMKIVIKPSSLSRMKTIFTQEIFTEQVVTAHAVRVPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LLVAMYFHSNQLSAIIDLVCSTLGMKIVIKPSSLSRMKTIFTQEIFTEQVVTAHAVRVPV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 TSNLSANITGFLPIHCIYQLLRSRSFTKHKVSIKDWIYRQLCETSTPLHPQLLPLIDVYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TSNLSANITGFLPIHCIYQLLRSRSFTKHKVSIKDWIYRQLCETSTPLHPQLLPLIDVYI
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 NSILTPASKSNPEATNQPVTEQEILNIFQGVIGGDNIRLNQRFSITAQLLVLYYILSYEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NSILTPASKSNPEATNQPVTEQEILNIFQGVIGGDNIRLNQRFSITAQLLVLYYILSYEE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 ALLANTKTLAAMQRKPKSYSSSLMDQIPIKFLIRQAQGLQQELGGLHSALLRLLATNYPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ALLANTKTLAAMQRKPKSYSSSLMDQIPIKFLIRQAQGLQQELGGLHSALLRLLATNYPH
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 LCIVDDWICEEEITGTDALLRRMLLTNNAKNHSPKQLQEAFSAVPVNHTQVMQIIEHLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LCIVDDWICEEEITGTDALLRRMLLTNNAKNHSPKQLQEAFSAVPVNHTQVMQIIEHLTL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 LSASELIPYAEVLTSNMSQLLNSGVPRRILQTVNKLWMVLNTVMPRRLWVMTVNALQPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LSASELIPYAEVLTSNMSQLLNSGVPRRILQTVNKLWMVLNTVMPRRLWVMTVNALQPSI
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 KFVRQQKYTQNDLMIDPLIVLRCDQRVHRCPPLMDITLHMLNGYLLASKAYLSAHLKETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KFVRQQKYTQNDLMIDPLIVLRCDQRVHRCPPLMDITLHMLNGYLLASKAYLSAHLKETE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 QDRPSQNNTIGLVGQTDAPEVTREELKNALLAAQDSAAVQILLEICLPTEEEKANGVNPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QDRPSQNNTIGLVGQTDAPEVTREELKNALLAAQDSAAVQILLEICLPTEEEKANGVNPD
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 SLLRNVQSVITTSAPNKGMEEGEDNLLCNLREVQCLICCLLHQMYIADPNIAKLVHFQGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SLLRNVQSVITTSAPNKGMEEGEDNLLCNLREVQCLICCLLHQMYIADPNIAKLVHFQGY
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 PCELLPLTVAGIPSMHICLDFIPELIAQPELEKQIFAIQLLSHLCIQYALPKSLSVARLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 PCELLPLTVAGIPSMHICLDFIPELIAQPELEKQIFAIQLLSHLCIQYALPKSLSVARLA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 VNVMGTLLTVLTQAKRYAFFMPTLPSLVSFCRAFPPLYEDIMSLLIQIGQVCASDVATQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VNVMGTLLTVLTQAKRYAFFMPTLPSLVSFCRAFPPLYEDIMSLLIQIGQVCASDVATQT
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 RDIDPIITRLQQIKEKPSGWSQICKDSSYKNGSRDTGSMDPDVQLCHCIERTVIEIINMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RDIDPIITRLQQIKEKPSGWSQICKDSSYKNGSRDTGSMDPDVQLCHCIERTVIEIINMS
1150 1160 1170 1180 1190 1200
pF1KA1 VSGI
::::
NP_065 VSGI
>>NP_001317346 (OMIM: 611346) integrator complex subunit (1196 aa)
initn: 7787 init1: 7787 opt: 7787 Z-score: 9737.7 bits: 1813.8 E(85289): 0
Smith-Waterman score: 7787; 100.0% identity (100.0% similar) in 1196 aa overlap (9-1204:1-1196)
10 20 30 40 50 60
pF1KA1 MKDQQTVIMTECTSLQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRMALCAPADQ
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTECTSLQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRMALCAPADQ
10 20 30 40 50
70 80 90 100 110 120
pF1KA1 SQSWAQDKKLILRLLSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLGGGSGESILVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQSWAQDKKLILRLLSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLGGGSGESILVS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KA1 QLQHGLTLEFEHSDSPRRLRLVLSELLAIMNKVSESNGEFFFKSSELFESPVYLEEAADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLQHGLTLEFEHSDSPRRLRLVLSELLAIMNKVSESNGEFFFKSSELFESPVYLEEAADV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KA1 LCILQAELPSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEVCRGLIKNGERQDEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCILQAELPSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEVCRGLIKNGERQDEES
180 190 200 210 220 230
250 260 270 280 290 300
pF1KA1 LGGRRRTDALRFLCKMNPSQALKVRGMVVEECHLPGLGVALTLDHTKNEACEDGVSDLVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGGRRRTDALRFLCKMNPSQALKVRGMVVEECHLPGLGVALTLDHTKNEACEDGVSDLVC
240 250 260 270 280 290
310 320 330 340 350 360
pF1KA1 FVSGLLLGTNAKVRTWFGTFIRNGQQRKRETSSSVLWQMRRQLLLELMGILPTVRSTRIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FVSGLLLGTNAKVRTWFGTFIRNGQQRKRETSSSVLWQMRRQLLLELMGILPTVRSTRIV
300 310 320 330 340 350
370 380 390 400 410 420
pF1KA1 EEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAGLKPTEEEAEQLLQLMTSRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAGLKPTEEEAEQLLQLMTSRPP
360 370 380 390 400 410
430 440 450 460 470 480
pF1KA1 ATPAGVRFVSLSFCMLLAFSTLVSTPEQEQLMVVWLSWMIKEEAYFESTSGVSASFGEML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATPAGVRFVSLSFCMLLAFSTLVSTPEQEQLMVVWLSWMIKEEAYFESTSGVSASFGEML
420 430 440 450 460 470
490 500 510 520 530 540
pF1KA1 LLVAMYFHSNQLSAIIDLVCSTLGMKIVIKPSSLSRMKTIFTQEIFTEQVVTAHAVRVPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVAMYFHSNQLSAIIDLVCSTLGMKIVIKPSSLSRMKTIFTQEIFTEQVVTAHAVRVPV
480 490 500 510 520 530
550 560 570 580 590 600
pF1KA1 TSNLSANITGFLPIHCIYQLLRSRSFTKHKVSIKDWIYRQLCETSTPLHPQLLPLIDVYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSNLSANITGFLPIHCIYQLLRSRSFTKHKVSIKDWIYRQLCETSTPLHPQLLPLIDVYI
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA1 NSILTPASKSNPEATNQPVTEQEILNIFQGVIGGDNIRLNQRFSITAQLLVLYYILSYEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSILTPASKSNPEATNQPVTEQEILNIFQGVIGGDNIRLNQRFSITAQLLVLYYILSYEE
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA1 ALLANTKTLAAMQRKPKSYSSSLMDQIPIKFLIRQAQGLQQELGGLHSALLRLLATNYPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALLANTKTLAAMQRKPKSYSSSLMDQIPIKFLIRQAQGLQQELGGLHSALLRLLATNYPH
660 670 680 690 700 710
730 740 750 760 770 780
pF1KA1 LCIVDDWICEEEITGTDALLRRMLLTNNAKNHSPKQLQEAFSAVPVNHTQVMQIIEHLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCIVDDWICEEEITGTDALLRRMLLTNNAKNHSPKQLQEAFSAVPVNHTQVMQIIEHLTL
720 730 740 750 760 770
790 800 810 820 830 840
pF1KA1 LSASELIPYAEVLTSNMSQLLNSGVPRRILQTVNKLWMVLNTVMPRRLWVMTVNALQPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSASELIPYAEVLTSNMSQLLNSGVPRRILQTVNKLWMVLNTVMPRRLWVMTVNALQPSI
780 790 800 810 820 830
850 860 870 880 890 900
pF1KA1 KFVRQQKYTQNDLMIDPLIVLRCDQRVHRCPPLMDITLHMLNGYLLASKAYLSAHLKETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFVRQQKYTQNDLMIDPLIVLRCDQRVHRCPPLMDITLHMLNGYLLASKAYLSAHLKETE
840 850 860 870 880 890
910 920 930 940 950 960
pF1KA1 QDRPSQNNTIGLVGQTDAPEVTREELKNALLAAQDSAAVQILLEICLPTEEEKANGVNPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDRPSQNNTIGLVGQTDAPEVTREELKNALLAAQDSAAVQILLEICLPTEEEKANGVNPD
900 910 920 930 940 950
970 980 990 1000 1010 1020
pF1KA1 SLLRNVQSVITTSAPNKGMEEGEDNLLCNLREVQCLICCLLHQMYIADPNIAKLVHFQGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLLRNVQSVITTSAPNKGMEEGEDNLLCNLREVQCLICCLLHQMYIADPNIAKLVHFQGY
960 970 980 990 1000 1010
1030 1040 1050 1060 1070 1080
pF1KA1 PCELLPLTVAGIPSMHICLDFIPELIAQPELEKQIFAIQLLSHLCIQYALPKSLSVARLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PCELLPLTVAGIPSMHICLDFIPELIAQPELEKQIFAIQLLSHLCIQYALPKSLSVARLA
1020 1030 1040 1050 1060 1070
1090 1100 1110 1120 1130 1140
pF1KA1 VNVMGTLLTVLTQAKRYAFFMPTLPSLVSFCRAFPPLYEDIMSLLIQIGQVCASDVATQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNVMGTLLTVLTQAKRYAFFMPTLPSLVSFCRAFPPLYEDIMSLLIQIGQVCASDVATQT
1080 1090 1100 1110 1120 1130
1150 1160 1170 1180 1190 1200
pF1KA1 RDIDPIITRLQQIKEKPSGWSQICKDSSYKNGSRDTGSMDPDVQLCHCIERTVIEIINMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RDIDPIITRLQQIKEKPSGWSQICKDSSYKNGSRDTGSMDPDVQLCHCIERTVIEIINMS
1140 1150 1160 1170 1180 1190
pF1KA1 VSGI
::::
NP_001 VSGI
>>XP_011523360 (OMIM: 611346) PREDICTED: integrator comp (1196 aa)
initn: 7778 init1: 7778 opt: 7778 Z-score: 9726.4 bits: 1811.8 E(85289): 0
Smith-Waterman score: 7778; 99.9% identity (100.0% similar) in 1196 aa overlap (9-1204:1-1196)
10 20 30 40 50 60
pF1KA1 MKDQQTVIMTECTSLQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRMALCAPADQ
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTECTSLQFVSPFAFEAMQKVDVVCLASLSDPELRLLLPCLVRMALCAPADQ
10 20 30 40 50
70 80 90 100 110 120
pF1KA1 SQSWAQDKKLILRLLSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLGGGSGESILVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQSWAQDKKLILRLLSGVEAVNSIVALLSVDFHALEQDASKEQQLRHKLGGGSGESILVS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KA1 QLQHGLTLEFEHSDSPRRLRLVLSELLAIMNKVSESNGEFFFKSSELFESPVYLEEAADV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLQHGLTLEFEHSDSPRRLRLVLSELLAIMNKVSESNGEFFFKSSELFESPVYLEEAADV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KA1 LCILQAELPSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEVCRGLIKNGERQDEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LCILQAELPSLLPIVDVAEALLHVRNGAWFLCLLVANVPDSFNEVCRGLIKNGERQDEES
180 190 200 210 220 230
250 260 270 280 290 300
pF1KA1 LGGRRRTDALRFLCKMNPSQALKVRGMVVEECHLPGLGVALTLDHTKNEACEDGVSDLVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGGRRRTDALRFLCKMNPSQALKVRGMVVEECHLPGLGVALTLDHTKNEACEDGVSDLVC
240 250 260 270 280 290
310 320 330 340 350 360
pF1KA1 FVSGLLLGTNAKVRTWFGTFIRNGQQRKRETSSSVLWQMRRQLLLELMGILPTVRSTRIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FVSGLLLGTNAKVRTWFGTFIRNGQQRKRETSSSVLWQMRRQLLLELMGILPTVRSTRIV
300 310 320 330 340 350
370 380 390 400 410 420
pF1KA1 EEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAGLKPTEEEAEQLLQLMTSRPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEADVDMEPNVSVYSGLKEEHVVKASALLRLYCALMGIAGLKPTEEEAEQLLQLMTSRPP
360 370 380 390 400 410
430 440 450 460 470 480
pF1KA1 ATPAGVRFVSLSFCMLLAFSTLVSTPEQEQLMVVWLSWMIKEEAYFESTSGVSASFGEML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATPAGVRFVSLSFCMLLAFSTLVSTPEQEQLMVVWLSWMIKEEAYFESTSGVSASFGEML
420 430 440 450 460 470
490 500 510 520 530 540
pF1KA1 LLVAMYFHSNQLSAIIDLVCSTLGMKIVIKPSSLSRMKTIFTQEIFTEQVVTAHAVRVPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLVAMYFHSNQLSAIIDLVCSTLGMKIVIKPSSLSRMKTIFTQEIFTEQVVTAHAVRVPV
480 490 500 510 520 530
550 560 570 580 590 600
pF1KA1 TSNLSANITGFLPIHCIYQLLRSRSFTKHKVSIKDWIYRQLCETSTPLHPQLLPLIDVYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSNLSANITGFLPIHCIYQLLRSRSFTKHKVSIKDWIYRQLCETSTPLHPQLLPLIDVYI
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA1 NSILTPASKSNPEATNQPVTEQEILNIFQGVIGGDNIRLNQRFSITAQLLVLYYILSYEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSILTPASKSNPEATNQPVTEQEILNIFQGVIGGDNIRLNQRFSITAQLLVLYYILSYEE
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA1 ALLANTKTLAAMQRKPKSYSSSLMDQIPIKFLIRQAQGLQQELGGLHSALLRLLATNYPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALLANTKTLAAMQRKPKSYSSSLMDQIPIKFLIRQAQGLQQELGGLHSALLRLLATNYPH
660 670 680 690 700 710
730 740 750 760 770 780
pF1KA1 LCIVDDWICEEEITGTDALLRRMLLTNNAKNHSPKQLQEAFSAVPVNHTQVMQIIEHLTL
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_011 LCIVDDWICEEEITGTDALLRRMLLTNNAKNHSPKQLQEAFSAVPVNNTQVMQIIEHLTL
720 730 740 750 760 770
790 800 810 820 830 840
pF1KA1 LSASELIPYAEVLTSNMSQLLNSGVPRRILQTVNKLWMVLNTVMPRRLWVMTVNALQPSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSASELIPYAEVLTSNMSQLLNSGVPRRILQTVNKLWMVLNTVMPRRLWVMTVNALQPSI
780 790 800 810 820 830
850 860 870 880 890 900
pF1KA1 KFVRQQKYTQNDLMIDPLIVLRCDQRVHRCPPLMDITLHMLNGYLLASKAYLSAHLKETE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KFVRQQKYTQNDLMIDPLIVLRCDQRVHRCPPLMDITLHMLNGYLLASKAYLSAHLKETE
840 850 860 870 880 890
910 920 930 940 950 960
pF1KA1 QDRPSQNNTIGLVGQTDAPEVTREELKNALLAAQDSAAVQILLEICLPTEEEKANGVNPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDRPSQNNTIGLVGQTDAPEVTREELKNALLAAQDSAAVQILLEICLPTEEEKANGVNPD
900 910 920 930 940 950
970 980 990 1000 1010 1020
pF1KA1 SLLRNVQSVITTSAPNKGMEEGEDNLLCNLREVQCLICCLLHQMYIADPNIAKLVHFQGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLLRNVQSVITTSAPNKGMEEGEDNLLCNLREVQCLICCLLHQMYIADPNIAKLVHFQGY
960 970 980 990 1000 1010
1030 1040 1050 1060 1070 1080
pF1KA1 PCELLPLTVAGIPSMHICLDFIPELIAQPELEKQIFAIQLLSHLCIQYALPKSLSVARLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PCELLPLTVAGIPSMHICLDFIPELIAQPELEKQIFAIQLLSHLCIQYALPKSLSVARLA
1020 1030 1040 1050 1060 1070
1090 1100 1110 1120 1130 1140
pF1KA1 VNVMGTLLTVLTQAKRYAFFMPTLPSLVSFCRAFPPLYEDIMSLLIQIGQVCASDVATQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VNVMGTLLTVLTQAKRYAFFMPTLPSLVSFCRAFPPLYEDIMSLLIQIGQVCASDVATQT
1080 1090 1100 1110 1120 1130
1150 1160 1170 1180 1190 1200
pF1KA1 RDIDPIITRLQQIKEKPSGWSQICKDSSYKNGSRDTGSMDPDVQLCHCIERTVIEIINMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RDIDPIITRLQQIKEKPSGWSQICKDSSYKNGSRDTGSMDPDVQLCHCIERTVIEIINMS
1140 1150 1160 1170 1180 1190
pF1KA1 VSGI
::::
XP_011 VSGI
1204 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 19:57:34 2016 done: Thu Nov 3 19:57:36 2016
Total Scan time: 16.970 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]