Result of FASTA (ccds) for
pF1KA1452
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1452, 708 aa
1>>>pF1KA1452 708 - 708 aa - 708 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9829+/-0.00091; mu= 13.0890+/- 0.055
mean_var=123.3482+/-24.226, 0's: 0 Z-trim(109.6): 15 B-trim: 0 in 0/52
Lambda= 0.115480
statistics sampled from 10965 (10971) to 10965 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.691), E-opt: 0.2 (0.337), width: 16
Scan time: 2.650
The best scores are: opt bits E(32554)
CCDS10605.1 POLR3E gene_id:55718|Hs108|chr16 ( 708) 4721 798.1 0
CCDS73845.1 POLR3E gene_id:55718|Hs108|chr16 ( 672) 4489 759.4 3.9e-219
CCDS58434.1 POLR3E gene_id:55718|Hs108|chr16 ( 672) 4410 746.2 3.6e-215
CCDS58432.1 POLR3E gene_id:55718|Hs108|chr16 ( 687) 4318 730.9 1.5e-210
CCDS58433.1 POLR3E gene_id:55718|Hs108|chr16 ( 666) 4312 729.9 2.9e-210
>>CCDS10605.1 POLR3E gene_id:55718|Hs108|chr16 (708 aa)
initn: 4721 init1: 4721 opt: 4721 Z-score: 4256.2 bits: 798.1 E(32554): 0
Smith-Waterman score: 4721; 100.0% identity (100.0% similar) in 708 aa overlap (1-708:1-708)
10 20 30 40 50 60
pF1KA1 MANEEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MANEEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 AIDTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 AIDTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 QGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 ESEQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ESEQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 SPSEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SPSEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LGPSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LGPSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TQSRWVVRKEVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TQSRWVVRKEVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 MLWTGIQAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MLWTGIQAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 RRKEQLRVPAVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RRKEQLRVPAVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 GTDSFNGHPPQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GTDSFNGHPPQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 GISDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFSKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GISDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFSKN
610 620 630 640 650 660
670 680 690 700
pF1KA1 YRVRRNMIQSRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YRVRRNMIQSRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
670 680 690 700
>>CCDS73845.1 POLR3E gene_id:55718|Hs108|chr16 (672 aa)
initn: 4489 init1: 4489 opt: 4489 Z-score: 4047.6 bits: 759.4 E(32554): 3.9e-219
Smith-Waterman score: 4489; 100.0% identity (100.0% similar) in 672 aa overlap (37-708:1-672)
10 20 30 40 50 60
pF1KA1 DPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEMAIDTLN
::::::::::::::::::::::::::::::
CCDS73 MTYDDIPHLSAKIKPKQQKVELEMAIDTLN
10 20 30
70 80 90 100 110 120
pF1KA1 PNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYRQGELHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYRQGELHL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KA1 TPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRPESEQAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRPESEQAR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KA1 QRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVKSPSEYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVKSPSEYL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KA1 MMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSLLGPSID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSLLGPSID
220 230 240 250 260 270
310 320 330 340 350 360
pF1KA1 SVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKFTQSRWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKFTQSRWV
280 290 300 310 320 330
370 380 390 400 410 420
pF1KA1 VRKEVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQHMLWTGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VRKEVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQHMLWTGI
340 350 360 370 380 390
430 440 450 460 470 480
pF1KA1 QAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQRRKEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQRRKEQL
400 410 420 430 440 450
490 500 510 520 530 540
pF1KA1 RVPAVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAAGTDSFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RVPAVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAAGTDSFN
460 470 480 490 500 510
550 560 570 580 590 600
pF1KA1 GHPPQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFSGISDRM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GHPPQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFSGISDRM
520 530 540 550 560 570
610 620 630 640 650 660
pF1KA1 LQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFSKNYRVRRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFSKNYRVRRN
580 590 600 610 620 630
670 680 690 700
pF1KA1 MIQSRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
::::::::::::::::::::::::::::::::::::::::::
CCDS73 MIQSRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
640 650 660 670
>>CCDS58434.1 POLR3E gene_id:55718|Hs108|chr16 (672 aa)
initn: 4408 init1: 4408 opt: 4410 Z-score: 3976.5 bits: 746.2 E(32554): 3.6e-215
Smith-Waterman score: 4410; 99.0% identity (99.4% similar) in 669 aa overlap (40-708:5-672)
10 20 30 40 50 60
pF1KA1 VQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEMAIDTLNPNY
.: : . .:::::::::::::::::::::
CCDS58 MANEEDDP-VVQEIKPKQQKVELEMAIDTLNPNY
10 20 30
70 80 90 100 110 120
pF1KA1 CRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYRQGELHLTPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYRQGELHLTPL
40 50 60 70 80 90
130 140 150 160 170 180
pF1KA1 HGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRPESEQARQRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRPESEQARQRR
100 110 120 130 140 150
190 200 210 220 230 240
pF1KA1 VQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVKSPSEYLMML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVKSPSEYLMML
160 170 180 190 200 210
250 260 270 280 290 300
pF1KA1 MPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSLLGPSIDSVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSLLGPSIDSVA
220 230 240 250 260 270
310 320 330 340 350 360
pF1KA1 VLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKFTQSRWVVRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKFTQSRWVVRK
280 290 300 310 320 330
370 380 390 400 410 420
pF1KA1 EVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQHMLWTGIQAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQHMLWTGIQAK
340 350 360 370 380 390
430 440 450 460 470 480
pF1KA1 LEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQRRKEQLRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQRRKEQLRVP
400 410 420 430 440 450
490 500 510 520 530 540
pF1KA1 AVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAAGTDSFNGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAAGTDSFNGHP
460 470 480 490 500 510
550 560 570 580 590 600
pF1KA1 PQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFSGISDRMLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFSGISDRMLQD
520 530 540 550 560 570
610 620 630 640 650 660
pF1KA1 TVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFSKNYRVRRNMIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFSKNYRVRRNMIQ
580 590 600 610 620 630
670 680 690 700
pF1KA1 SRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
:::::::::::::::::::::::::::::::::::::::
CCDS58 SRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
640 650 660 670
>>CCDS58432.1 POLR3E gene_id:55718|Hs108|chr16 (687 aa)
initn: 4318 init1: 4318 opt: 4318 Z-score: 3893.5 bits: 730.9 E(32554): 1.5e-210
Smith-Waterman score: 4533; 97.0% identity (97.0% similar) in 708 aa overlap (1-708:1-687)
10 20 30 40 50 60
pF1KA1 MANEEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MANEEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 AIDTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AIDTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 QGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 ESEQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ESEQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 SPSEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SPSEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LGPSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LGPSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TQSRWVVRKEVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TQSRWVVRKEVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 MLWTGIQAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MLWTGIQAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 RRKEQLRVPAVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RRKEQLRVPAVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 GTDSFNGHPPQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GTDSFNGHPPQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 GISDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFSKN
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GISDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQ------------
610 620 630 640
670 680 690 700
pF1KA1 YRVRRNMIQSRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
:::::::::::::::::::::::::::::::::::::::
CCDS58 ---------SRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
650 660 670 680
>>CCDS58433.1 POLR3E gene_id:55718|Hs108|chr16 (666 aa)
initn: 4312 init1: 4312 opt: 4312 Z-score: 3888.3 bits: 729.9 E(32554): 2.9e-210
Smith-Waterman score: 4357; 94.1% identity (94.1% similar) in 708 aa overlap (1-708:1-666)
10 20 30 40 50 60
pF1KA1 MANEEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MANEEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 AIDTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AIDTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 QGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 ESEQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ESEQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 SPSEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SPSEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LGPSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LGPSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TQSRWVVRKEVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TQSRWVVRKEVATVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 MLWTGIQAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MLWTGIQAKLEKVYNLVKETMPKKPDAQSGPAGLVCGDQRIQVAKTKAQQNHALLERELQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 RRKEQLRVPAVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RRKEQLRVPAVPPGVRIKEEPVSEEGEEDEEQEAEEEPMDTSPSGLHSKLANGLPLGRAA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 GTDSFNGHPPQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GTDSFNGHPPQGCASTPVARELKAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHTLFS
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 GISDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFSKN
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GISDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQ------------
610 620 630 640
670 680 690 700
pF1KA1 YRVRRNMIQSRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
::::::::::::::::::
CCDS58 ------------------------------DCCVSYGGMWYLKGTVQS
650 660
708 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:12:32 2016 done: Wed Nov 2 21:12:33 2016
Total Scan time: 2.650 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]