Result of FASTA (omim) for
pF1KA1462
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1462, 1359 aa
1>>>pF1KA1462 1359 - 1359 aa - 1359 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.0727+/-0.000403; mu= -9.0794+/- 0.025
mean_var=338.2834+/-70.138, 0's: 0 Z-trim(121.9): 14 B-trim: 166 in 1/58
Lambda= 0.069732
statistics sampled from 39050 (39081) to 39050 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.458), width: 16
Scan time: 21.380
The best scores are: opt bits E(85289)
XP_011517910 (OMIM: 614398) PREDICTED: junctional (1359) 9377 958.3 0
NP_065899 (OMIM: 614398) junctional protein associ (1359) 9377 958.3 0
XP_011517911 (OMIM: 614398) PREDICTED: junctional (1221) 8427 862.7 0
>>XP_011517910 (OMIM: 614398) PREDICTED: junctional prot (1359 aa)
initn: 9377 init1: 9377 opt: 9377 Z-score: 5111.9 bits: 958.3 E(85289): 0
Smith-Waterman score: 9377; 99.9% identity (99.9% similar) in 1359 aa overlap (1-1359:1-1359)
10 20 30 40 50 60
pF1KA1 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKGHLE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
XP_011 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
1270 1280 1290 1300 1310 1320
1330 1340 1350
pF1KA1 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
:::::::::::::::::::::::::::::::::::::::
XP_011 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
1330 1340 1350
>>NP_065899 (OMIM: 614398) junctional protein associated (1359 aa)
initn: 9377 init1: 9377 opt: 9377 Z-score: 5111.9 bits: 958.3 E(85289): 0
Smith-Waterman score: 9377; 99.9% identity (99.9% similar) in 1359 aa overlap (1-1359:1-1359)
10 20 30 40 50 60
pF1KA1 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MYSVEDLLISHGYKLSRDPPASREDNPKGRQAARTGTRAGQGLQNGHEDGPAALAHRKTS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 AGKGHVSDSESRRSTPRGHGEPQSTSASRTSEAGFCNQPPSAWSSHPPTGNDQAYRRRGR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 QEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPVWEEELRMSGPAK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 WQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGKSRSLPRVLSPES
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPKFGRPLKPPSYSS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 HQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRSPPQNIPNPYLED
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLPAHPRPVTAYDGF
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGMQPDGAIWNPQSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 IPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPDVRGSQHGHTGRQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVKSESHLPDRDMDN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 NDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQKQDLGEPEEDRQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 TNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGAKLGGPSRAALSP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTSLSVDQAPTPKAG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRPWDLISQLESFNK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEMRVEPQPRMWVPE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKGHLE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::
NP_065 SPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSADGSTSAEKRHLE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 VSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSAFSSVKPSEAVPR
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 KFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSLGEASTIEIPPGE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 SLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEELLSRPAPADVPRV
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 STDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLESKF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 FEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLASPPRRADPDRLM
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 RMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSGDRAQRLGHSLSV
1270 1280 1290 1300 1310 1320
1330 1340 1350
pF1KA1 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
:::::::::::::::::::::::::::::::::::::::
NP_065 SKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
1330 1340 1350
>>XP_011517911 (OMIM: 614398) PREDICTED: junctional prot (1221 aa)
initn: 8427 init1: 8427 opt: 8427 Z-score: 4596.1 bits: 862.7 E(85289): 0
Smith-Waterman score: 8427; 99.9% identity (99.9% similar) in 1221 aa overlap (139-1359:1-1221)
110 120 130 140 150 160
pF1KA1 TGNDQAYRRRGRQEARSQKPREHENLEARGMAQAHSLPVHVREGPWEVGGRSEHVMKKPV
::::::::::::::::::::::::::::::
XP_011 MAQAHSLPVHVREGPWEVGGRSEHVMKKPV
10 20 30
170 180 190 200 210 220
pF1KA1 WEEELRMSGPAKWQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WEEELRMSGPAKWQNVSLESWNQPRKLGRQMSDGDGERLFQDLYPFIQGEHVLNSQNKGK
40 50 60 70 80 90
230 240 250 260 270 280
pF1KA1 SRSLPRVLSPESLSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRSLPRVLSPESLSCTEIPIPLNERHSPKMPPYPPTCAPNLDSTRNSEKSGCSAPFPRPK
100 110 120 130 140 150
290 300 310 320 330 340
pF1KA1 FGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGRPLKPPSYSSHQQSRGGADSSDSQDSQQMDAYVPRHELCLSDPGLEPPVYVPPPSYRS
160 170 180 190 200 210
350 360 370 380 390 400
pF1KA1 PPQNIPNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPQNIPNPYLEDTVPINVCGGHSQQQSPTEKAGASGQPPSGPPGTGNEYGVSPRLPQGLP
220 230 240 250 260 270
410 420 430 440 450 460
pF1KA1 AHPRPVTAYDGFVQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHPRPVTAYDGFVQYIPFDDPRLRHFKLAQPQGFCEDIKLDDKSYNSSPVTAQEPAHGGM
280 290 300 310 320 330
470 480 490 500 510 520
pF1KA1 QPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QPDGAIWNPQSLIPPSGDERGLVLADSSPRWLWGQPPGDGENSGLPNQRDRCVARGQWPD
340 350 360 370 380 390
530 540 550 560 570 580
pF1KA1 VRGSQHGHTGRQVSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VRGSQHGHTGRQVSSPYSQGESTCETQTKLKKFQTGTRTKKSSKKKMNETIFCLVSIPVK
400 410 420 430 440 450
590 600 610 620 630 640
pF1KA1 SESHLPDRDMDNNDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SESHLPDRDMDNNDLKPSADQKNGSDKSPALQEQSLLSMSSTDLELQALTGSMGGRTEFQ
460 470 480 490 500 510
650 660 670 680 690 700
pF1KA1 KQDLGEPEEDRQTNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQDLGEPEEDRQTNDLSFIHLTKHRELKHSGSWPGHRYRDQQTQTSFSEEPQSSQLLPGA
520 530 540 550 560 570
710 720 730 740 750 760
pF1KA1 KLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLGGPSRAALSPKCSDPAASEAQTHTAFPTGDHKQRPSARNLKGHRSLSPSSNSAFSRTS
580 590 600 610 620 630
770 780 790 800 810 820
pF1KA1 LSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSVDQAPTPKAGRSQPCVDVHGLGAHPGPKREVVKGEPTGPCNSKQLFGQFLLKPVSRRP
640 650 660 670 680 690
830 840 850 860 870 880
pF1KA1 WDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WDLISQLESFNKELQEEEESSSSSSSSSSSSEESEAEPQQENRAHCRQEDVGFRGNSPEM
700 710 720 730 740 750
890 900 910 920 930 940
pF1KA1 RVEPQPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RVEPQPRMWVPESPVCRSGRGESKSESWSEELQPGHPRAWPPSPGRFRVEEGGGAPFCSA
760 770 780 790 800 810
950 960 970 980 990 1000
pF1KA1 DGSTSAEKGHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSA
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGSTSAEKRHLEVSNGMDELAGSPFPVTRMSSRSSDAKPLPASYPAEPREPQESPKITSA
820 830 840 850 860 870
1010 1020 1030 1040 1050 1060
pF1KA1 FSSVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSSVKPSEAVPRKFDSGGERGAGLPLSLSNKNRGLSAPDLRSVGLTPGQEQGASELEGSL
880 890 900 910 920 930
1070 1080 1090 1100 1110 1120
pF1KA1 GEASTIEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEASTIEIPPGESLQARAARILGIEVAVESLLPGIRRAGQNQPAEPDASACTPESPQEEL
940 950 960 970 980 990
1130 1140 1150 1160 1170 1180
pF1KA1 LSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSRPAPADVPRVSTDAFYGRRKCGWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPV
1000 1010 1020 1030 1040 1050
1190 1200 1210 1220 1230 1240
pF1KA1 PEPEPSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEPEPSPLESKFFEQKDVETKPPFRSTLFHFVERTPSVAGSEKRLRSPSKVIESLQEKLA
1060 1070 1080 1090 1100 1110
1250 1260 1270 1280 1290 1300
pF1KA1 SPPRRADPDRLMRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPPRRADPDRLMRMKEVSSVSRMRVLSFRNADSQEDAEELKATTRGQAGLPGGLVSPGSG
1120 1130 1140 1150 1160 1170
1310 1320 1330 1340 1350
pF1KA1 DRAQRLGHSLSVSKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRAQRLGHSLSVSKDSISREEKEHPAAQKEKSMDQDFWCPDSYDPSRVERV
1180 1190 1200 1210 1220
1359 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 11:08:22 2016 done: Thu Nov 3 11:08:25 2016
Total Scan time: 21.380 Total Display time: 0.200
Function used was FASTA [36.3.4 Apr, 2011]