Result of FASTA (ccds) for
pF1KA1522
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1522, 1046 aa
1>>>pF1KA1522 1046 - 1046 aa - 1046 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 16.4577+/-0.00121; mu= -26.5834+/- 0.073
mean_var=770.6426+/-159.399, 0's: 0 Z-trim(118.1): 123 B-trim: 0 in 0/53
Lambda= 0.046201
statistics sampled from 18813 (18933) to 18813 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.582), width: 16
Scan time: 4.450
The best scores are: opt bits E(32554)
CCDS41298.1 KIAA1522 gene_id:57648|Hs108|chr1 (1094) 6971 480.5 8.6e-135
CCDS55588.1 KIAA1522 gene_id:57648|Hs108|chr1 (1035) 6953 479.3 1.9e-134
CCDS55589.1 KIAA1522 gene_id:57648|Hs108|chr1 ( 143) 795 68.1 1.5e-11
>>CCDS41298.1 KIAA1522 gene_id:57648|Hs108|chr1 (1094 aa)
initn: 6956 init1: 6956 opt: 6971 Z-score: 2533.4 bits: 480.5 E(32554): 8.6e-135
Smith-Waterman score: 6971; 98.5% identity (99.2% similar) in 1037 aa overlap (11-1046:58-1094)
10 20 30
pF1KA1 MGNSHHKRKAPSGPRVRSFWRFGRSAK-RPAGSAKAENDK
:..::... .. :: . :::::::::
CCDS41 RSGASGLRRAFSWLRGKRRKKKAAGAEGAEPAAPRAKKAEDKAKRAKGKGRGSAKAENDK
30 40 50 60 70 80
40 50 60 70 80 90
pF1KA1 HLSVGPGQGPGSAVDEHQDNVFFPSGRPPHLEELHTQAQEGLRSLQHQEKQKLNKGGWDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HLSVGPGQGPGSAVDEHQDNVFFPSGRPPHLEELHTQAQEGLRSLQHQEKQKLNKGGWDH
90 100 110 120 130 140
100 110 120 130 140 150
pF1KA1 GDTQSIQSSRTGPDEDNISFCSQTTSYVAESSTAEDALSIRSEMIQRKGSTFRPHDSFPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GDTQSIQSSRTGPDEDNISFCSQTTSYVAESSTAEDALSIRSEMIQRKGSTFRPHDSFPK
150 160 170 180 190 200
160 170 180 190 200 210
pF1KA1 SGKSGRRRRERRSTVLGLPQHVQKELGLRNEREAPGTPRAPGARDAVRIPTVDGRPRGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SGKSGRRRRERRSTVLGLPQHVQKELGLRNEREAPGTPRAPGARDAVRIPTVDGRPRGTS
210 220 230 240 250 260
220 230 240 250 260 270
pF1KA1 GMGARVSLQALEAEAEAGAETEAMLQRHIDRVYRDDTFVGRSTGTRAPPLTRPMSLAVPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GMGARVSLQALEAEAEAGAETEAMLQRHIDRVYRDDTFVGRSTGTRAPPLTRPMSLAVPG
270 280 290 300 310 320
280 290 300 310 320 330
pF1KA1 LTGGAGPAEPLSPAMSISPQATYLSKLIPHAVLPPTVDVVALGRCSLRTLSRCSLHSASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LTGGAGPAEPLSPAMSISPQATYLSKLIPHAVLPPTVDVVALGRCSLRTLSRCSLHSASP
330 340 350 360 370 380
340 350 360 370 380 390
pF1KA1 ASVRSLGRFSSVSSPQPRSRHPSSSSDTWSHSQSSDTIVSDGSTLSSKGGSEGQPESSTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ASVRSLGRFSSVSSPQPRSRHPSSSSDTWSHSQSSDTIVSDGSTLSSKGGSEGQPESSTA
390 400 410 420 430 440
400 410 420 430 440 450
pF1KA1 SNSVVPPPQGGSGRGSPSGGSTAEASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRRTHSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SNSVVPPPQGGSGRGSPSGGSTAEASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRRTHSL
450 460 470 480 490 500
460 470 480 490 500 510
pF1KA1 HQRGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 HQRGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGS
510 520 530 540 550 560
520 530 540 550 560 570
pF1KA1 RRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVS
570 580 590 600 610 620
580 590 600 610 620 630
pF1KA1 SSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPAL
630 640 650 660 670 680
640 650 660 670 680 690
pF1KA1 AAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKKP
690 700 710 720 730 740
700 710 720 730 740 750
pF1KA1 EVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 EVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSG
750 760 770 780 790 800
760 770 780 790 800 810
pF1KA1 SPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGG
810 820 830 840 850 860
820 830 840 850 860 870
pF1KA1 GPPREDVGAPLVTPSLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GPPREDVGAPLVTPSLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPS
870 880 890 900 910 920
880 890 900 910 920 930
pF1KA1 SGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPRPPQSPASTASFIFSKGSRKLQLERPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SGLHAAVRLKACSLAASEGLSSAQPNGPPEAEPRPPQSPASTASFIFSKGSRKLQLERPV
930 940 950 960 970 980
940 950 960 970 980 990
pF1KA1 SPETQADLQRNLVAELRSISEQRPPQAPKKSPKAPPPVARKPSVGVPPPASPSYPRAEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SPETQADLQRNLVAELRSISEQRPPQAPKKSPKAPPPVARKPSVGVPPPASPSYPRAEPL
990 1000 1010 1020 1030 1040
1000 1010 1020 1030 1040
pF1KA1 TAPPTNGLPHTQDRTKRELAENGGVLQLVGPEEKMGLPGSDSQKELA
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TAPPTNGLPHTQDRTKRELAENGGVLQLVGPEEKMGLPGSDSQKELA
1050 1060 1070 1080 1090
>>CCDS55588.1 KIAA1522 gene_id:57648|Hs108|chr1 (1035 aa)
initn: 6953 init1: 6953 opt: 6953 Z-score: 2527.3 bits: 479.3 E(32554): 1.9e-134
Smith-Waterman score: 6953; 99.7% identity (99.8% similar) in 1019 aa overlap (28-1046:17-1035)
10 20 30 40 50 60
pF1KA1 MGNSHHKRKAPSGPRVRSFWRFGRSAKRPAGSAKAENDKHLSVGPGQGPGSAVDEHQDNV
. ::::::::::::::::::::::::::::::
CCDS55 MVVFVGRRLPALLGLFKKKGSAKAENDKHLSVGPGQGPGSAVDEHQDNV
10 20 30 40
70 80 90 100 110 120
pF1KA1 FFPSGRPPHLEELHTQAQEGLRSLQHQEKQKLNKGGWDHGDTQSIQSSRTGPDEDNISFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FFPSGRPPHLEELHTQAQEGLRSLQHQEKQKLNKGGWDHGDTQSIQSSRTGPDEDNISFC
50 60 70 80 90 100
130 140 150 160 170 180
pF1KA1 SQTTSYVAESSTAEDALSIRSEMIQRKGSTFRPHDSFPKSGKSGRRRRERRSTVLGLPQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SQTTSYVAESSTAEDALSIRSEMIQRKGSTFRPHDSFPKSGKSGRRRRERRSTVLGLPQH
110 120 130 140 150 160
190 200 210 220 230 240
pF1KA1 VQKELGLRNEREAPGTPRAPGARDAVRIPTVDGRPRGTSGMGARVSLQALEAEAEAGAET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VQKELGLRNEREAPGTPRAPGARDAVRIPTVDGRPRGTSGMGARVSLQALEAEAEAGAET
170 180 190 200 210 220
250 260 270 280 290 300
pF1KA1 EAMLQRHIDRVYRDDTFVGRSTGTRAPPLTRPMSLAVPGLTGGAGPAEPLSPAMSISPQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EAMLQRHIDRVYRDDTFVGRSTGTRAPPLTRPMSLAVPGLTGGAGPAEPLSPAMSISPQA
230 240 250 260 270 280
310 320 330 340 350 360
pF1KA1 TYLSKLIPHAVLPPTVDVVALGRCSLRTLSRCSLHSASPASVRSLGRFSSVSSPQPRSRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TYLSKLIPHAVLPPTVDVVALGRCSLRTLSRCSLHSASPASVRSLGRFSSVSSPQPRSRH
290 300 310 320 330 340
370 380 390 400 410 420
pF1KA1 PSSSSDTWSHSQSSDTIVSDGSTLSSKGGSEGQPESSTASNSVVPPPQGGSGRGSPSGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PSSSSDTWSHSQSSDTIVSDGSTLSSKGGSEGQPESSTASNSVVPPPQGGSGRGSPSGGS
350 360 370 380 390 400
430 440 450 460 470 480
pF1KA1 TAEASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRRTHSLHQRGLAVPDGPLGLPPKPERK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TAEASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRRTHSLHQRGLAVPDGPLGLPPKPERK
410 420 430 440 450 460
490 500 510 520 530 540
pF1KA1 QQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQS
470 480 490 500 510 520
550 560 570 580 590 600
pF1KA1 GTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGP
530 540 550 560 570 580
610 620 630 640 650 660
pF1KA1 QILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPP
590 600 610 620 630 640
670 680 690 700 710 720
pF1KA1 TPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TPQTTLTPLQESPVISKDQSPPPSPPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPN
650 660 670 680 690 700
730 740 750 760 770 780
pF1KA1 WPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 WPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQ
710 720 730 740 750 760
790 800 810 820 830 840
pF1KA1 PPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQMVR
770 780 790 800 810 820
850 860 870 880 890 900
pF1KA1 LRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPSSGLHAAVRLKACSLAASEGLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LRSVGAPGGAPTPALGPSAPQKPLRRALSGRASPVPAPSSGLHAAVRLKACSLAASEGLS
830 840 850 860 870 880
910 920 930 940 950 960
pF1KA1 SAQPNGPPEAEPRPPQSPASTASFIFSKGSRKLQLERPVSPETQADLQRNLVAELRSISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SAQPNGPPEAEPRPPQSPASTASFIFSKGSRKLQLERPVSPETQADLQRNLVAELRSISE
890 900 910 920 930 940
970 980 990 1000 1010 1020
pF1KA1 QRPPQAPKKSPKAPPPVARKPSVGVPPPASPSYPRAEPLTAPPTNGLPHTQDRTKRELAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QRPPQAPKKSPKAPPPVARKPSVGVPPPASPSYPRAEPLTAPPTNGLPHTQDRTKRELAE
950 960 970 980 990 1000
1030 1040
pF1KA1 NGGVLQLVGPEEKMGLPGSDSQKELA
::::::::::::::::::::::::::
CCDS55 NGGVLQLVGPEEKMGLPGSDSQKELA
1010 1020 1030
>>CCDS55589.1 KIAA1522 gene_id:57648|Hs108|chr1 (143 aa)
initn: 794 init1: 794 opt: 795 Z-score: 320.8 bits: 68.1 E(32554): 1.5e-11
Smith-Waterman score: 795; 96.7% identity (97.5% similar) in 122 aa overlap (28-149:17-138)
10 20 30 40 50 60
pF1KA1 MGNSHHKRKAPSGPRVRSFWRFGRSAKRPAGSAKAENDKHLSVGPGQGPGSAVDEHQDNV
. ::::::::::::::::::::::::::::::
CCDS55 MVVFVGRRLPALLGLFKKKGSAKAENDKHLSVGPGQGPGSAVDEHQDNV
10 20 30 40
70 80 90 100 110 120
pF1KA1 FFPSGRPPHLEELHTQAQEGLRSLQHQEKQKLNKGGWDHGDTQSIQSSRTGPDEDNISFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FFPSGRPPHLEELHTQAQEGLRSLQHQEKQKLNKGGWDHGDTQSIQSSRTGPDEDNISFC
50 60 70 80 90 100
130 140 150 160 170 180
pF1KA1 SQTTSYVAESSTAEDALSIRSEMIQRKGSTFRPHDSFPKSGKSGRRRRERRSTVLGLPQH
::::::::::::::::::::::::::: :
CCDS55 SQTTSYVAESSTAEDALSIRSEMIQRKDSQKELA
110 120 130 140
1046 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:22:57 2016 done: Wed Nov 2 21:22:57 2016
Total Scan time: 4.450 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]