Result of FASTA (ccds) for
pF1KA1525
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1525, 1132 aa
1>>>pF1KA1525 1132 - 1132 aa - 1132 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.2138+/-0.00112; mu= 0.8125+/- 0.067
mean_var=260.5802+/-55.958, 0's: 0 Z-trim(111.9): 25 B-trim: 1602 in 3/50
Lambda= 0.079452
statistics sampled from 12745 (12760) to 12745 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.392), width: 16
Scan time: 5.740
The best scores are: opt bits E(32554)
CCDS32146.1 BTBD7 gene_id:55727|Hs108|chr14 (1132) 7577 882.7 0
CCDS73684.1 BTBD7 gene_id:55727|Hs108|chr14 ( 781) 5031 590.7 4.3e-168
CCDS32147.1 BTBD7 gene_id:55727|Hs108|chr14 ( 410) 2548 305.9 1.2e-82
>>CCDS32146.1 BTBD7 gene_id:55727|Hs108|chr14 (1132 aa)
initn: 7577 init1: 7577 opt: 7577 Z-score: 4706.1 bits: 882.7 E(32554): 0
Smith-Waterman score: 7577; 100.0% identity (100.0% similar) in 1132 aa overlap (1-1132:1-1132)
10 20 30 40 50 60
pF1KA1 MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 SGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 ARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 IIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 FDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 EITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 KPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 QALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 DREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDAMKRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDAMKRG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 LISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 RMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 LQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGD
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 ESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGW
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 KQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 AAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTELSQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTELSQS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 VSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPSTPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 VSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPSTPAL
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 SRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHRQ
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 KNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLSACSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLSACSS
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130
pF1KA1 EAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL
1090 1100 1110 1120 1130
>>CCDS73684.1 BTBD7 gene_id:55727|Hs108|chr14 (781 aa)
initn: 5031 init1: 5031 opt: 5031 Z-score: 3131.3 bits: 590.7 E(32554): 4.3e-168
Smith-Waterman score: 5031; 99.9% identity (100.0% similar) in 746 aa overlap (387-1132:36-781)
360 370 380 390 400 410
pF1KA1 LVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSK
.:::::::::::::::::::::::::::::
CCDS73 GAGADGGAGGGGGGGDGSGPSGSSSGGRSLRGCEDIIAESISLDTLIAILKWSSHPYGSK
10 20 30 40 50 60
420 430 440 450 460 470
pF1KA1 WVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 WVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLM
70 80 90 100 110 120
480 490 500 510 520 530
pF1KA1 KRIADREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KRIADREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDA
130 140 150 160 170 180
540 550 560 570 580 590
pF1KA1 MKRGLISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MKRGLISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTD
190 200 210 220 230 240
600 610 620 630 640 650
pF1KA1 LVRLRMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LVRLRMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKD
250 260 270 280 290 300
660 670 680 690 700 710
pF1KA1 MVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDE
310 320 330 340 350 360
720 730 740 750 760 770
pF1KA1 RFGDESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RFGDESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQL
370 380 390 400 410 420
780 790 800 810 820 830
pF1KA1 KAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQ
430 440 450 460 470 480
840 850 860 870 880 890
pF1KA1 TVAAAAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TVAAAAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTE
490 500 510 520 530 540
900 910 920 930 940 950
pF1KA1 LSQSVSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LSQSVSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPS
550 560 570 580 590 600
960 970 980 990 1000 1010
pF1KA1 TPALSRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 TPALSRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGH
610 620 630 640 650 660
1020 1030 1040 1050 1060 1070
pF1KA1 LHRQKNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LHRQKNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLS
670 680 690 700 710 720
1080 1090 1100 1110 1120 1130
pF1KA1 ACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL
730 740 750 760 770 780
>>CCDS32147.1 BTBD7 gene_id:55727|Hs108|chr14 (410 aa)
initn: 2547 init1: 2547 opt: 2548 Z-score: 1597.2 bits: 305.9 E(32554): 1.2e-82
Smith-Waterman score: 2548; 98.7% identity (99.0% similar) in 393 aa overlap (1-393:1-393)
10 20 30 40 50 60
pF1KA1 MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 SGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 ARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 IIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 IIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 FDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 EITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 KPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHR
::::::::::::::::::::::::::: .:
CCDS32 KPNMTRAEEAMELYHIALFLEFNMLAQEETTVIRPACAAELSNSCLLPQS
370 380 390 400 410
430 440 450 460 470 480
pF1KA1 QALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIA
1132 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 11:15:42 2016 done: Thu Nov 3 11:15:42 2016
Total Scan time: 5.740 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]