Result of FASTA (ccds) for
pF1KA1598
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1598, 631 aa
1>>>pF1KA1598 631 - 631 aa - 631 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.5288+/-0.00108; mu= -10.2095+/- 0.065
mean_var=454.6522+/-95.131, 0's: 0 Z-trim(115.4): 24 B-trim: 140 in 1/52
Lambda= 0.060150
statistics sampled from 15977 (15992) to 15977 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.491), width: 16
Scan time: 3.070
The best scores are: opt bits E(32554)
CCDS44482.1 SHTN1 gene_id:57698|Hs108|chr10 ( 631) 4025 363.6 4.5e-100
CCDS73207.1 SHTN1 gene_id:57698|Hs108|chr10 ( 571) 3647 330.8 3.1e-90
CCDS73208.1 SHTN1 gene_id:57698|Hs108|chr10 ( 558) 3528 320.4 3.9e-87
CCDS58097.1 SHTN1 gene_id:57698|Hs108|chr10 ( 498) 3150 287.6 2.7e-77
CCDS31293.1 SHTN1 gene_id:57698|Hs108|chr10 ( 456) 2878 264.0 3.2e-70
>>CCDS44482.1 SHTN1 gene_id:57698|Hs108|chr10 (631 aa)
initn: 4025 init1: 4025 opt: 4025 Z-score: 1910.1 bits: 363.6 E(32554): 4.5e-100
Smith-Waterman score: 4025; 100.0% identity (100.0% similar) in 631 aa overlap (1-631:1-631)
10 20 30 40 50 60
pF1KA1 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
550 560 570 580 590 600
610 620 630
pF1KA1 PTQHKEDEGEIQPENKEDSIENVRETDSSNC
:::::::::::::::::::::::::::::::
CCDS44 PTQHKEDEGEIQPENKEDSIENVRETDSSNC
610 620 630
>>CCDS73207.1 SHTN1 gene_id:57698|Hs108|chr10 (571 aa)
initn: 3647 init1: 3647 opt: 3647 Z-score: 1733.4 bits: 330.8 E(32554): 3.1e-90
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 571 aa overlap (61-631:1-571)
40 50 60 70 80 90
pF1KA1 NQKTKEKCDKIRQERDEAVKKLEEFQKISHMVIEEVNFMQNHLEIEKTCRESAEALATKL
::::::::::::::::::::::::::::::
CCDS73 MVIEEVNFMQNHLEIEKTCRESAEALATKL
10 20 30
100 110 120 130 140 150
pF1KA1 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
40 50 60 70 80 90
160 170 180 190 200 210
pF1KA1 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KA1 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
160 170 180 190 200 210
280 290 300 310 320 330
pF1KA1 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KA1 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
280 290 300 310 320 330
400 410 420 430 440 450
pF1KA1 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
340 350 360 370 380 390
460 470 480 490 500 510
pF1KA1 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
400 410 420 430 440 450
520 530 540 550 560 570
pF1KA1 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQPPSSIGCRKKYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQPPSSIGCRKKYI
460 470 480 490 500 510
580 590 600 610 620 630
pF1KA1 DGEKQAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRETDSSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DGEKQAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRETDSSN
520 530 540 550 560 570
pF1KA1 C
:
CCDS73 C
>>CCDS73208.1 SHTN1 gene_id:57698|Hs108|chr10 (558 aa)
initn: 3528 init1: 3528 opt: 3528 Z-score: 1677.8 bits: 320.4 E(32554): 3.9e-87
Smith-Waterman score: 3528; 100.0% identity (100.0% similar) in 558 aa overlap (1-558:1-558)
10 20 30 40 50 60
pF1KA1 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
::::::::::::::::::
CCDS73 GEGPRKLEGCTSSKVTFQ
550
>>CCDS58097.1 SHTN1 gene_id:57698|Hs108|chr10 (498 aa)
initn: 3150 init1: 3150 opt: 3150 Z-score: 1501.1 bits: 287.6 E(32554): 2.7e-77
Smith-Waterman score: 3150; 100.0% identity (100.0% similar) in 498 aa overlap (61-558:1-498)
40 50 60 70 80 90
pF1KA1 NQKTKEKCDKIRQERDEAVKKLEEFQKISHMVIEEVNFMQNHLEIEKTCRESAEALATKL
::::::::::::::::::::::::::::::
CCDS58 MVIEEVNFMQNHLEIEKTCRESAEALATKL
10 20 30
100 110 120 130 140 150
pF1KA1 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
40 50 60 70 80 90
160 170 180 190 200 210
pF1KA1 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
100 110 120 130 140 150
220 230 240 250 260 270
pF1KA1 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
160 170 180 190 200 210
280 290 300 310 320 330
pF1KA1 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
220 230 240 250 260 270
340 350 360 370 380 390
pF1KA1 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
280 290 300 310 320 330
400 410 420 430 440 450
pF1KA1 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
340 350 360 370 380 390
460 470 480 490 500 510
pF1KA1 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
400 410 420 430 440 450
520 530 540 550 560 570
pF1KA1 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQPPSSIGCRKKYI
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQ
460 470 480 490
580 590 600 610 620 630
pF1KA1 DGEKQAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRETDSSN
>>CCDS31293.1 SHTN1 gene_id:57698|Hs108|chr10 (456 aa)
initn: 3100 init1: 2878 opt: 2878 Z-score: 1374.1 bits: 264.0 E(32554): 3.2e-70
Smith-Waterman score: 2878; 99.6% identity (100.0% similar) in 455 aa overlap (1-455:1-455)
10 20 30 40 50 60
pF1KA1 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
:::::::::::::::::::::::::::::::::..
CCDS31 VHLRPVNQTARPKTKPESSKGCESAVDELKGILASQ
430 440 450
490 500 510 520 530 540
pF1KA1 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
631 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:31:35 2016 done: Wed Nov 2 21:31:36 2016
Total Scan time: 3.070 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]