Result of FASTA (omim) for
pF1KA1692
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1692, 833 aa
1>>>pF1KA1692 833 - 833 aa - 833 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4986+/-0.000497; mu= 14.7378+/- 0.031
mean_var=99.6210+/-20.511, 0's: 0 Z-trim(109.2): 146 B-trim: 0 in 0/53
Lambda= 0.128499
statistics sampled from 17277 (17412) to 17277 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.556), E-opt: 0.2 (0.204), width: 16
Scan time: 10.360
The best scores are: opt bits E(85289)
NP_001161384 (OMIM: 609594) ventricular zone-expre ( 833) 5433 1018.9 0
NP_078897 (OMIM: 609594) ventricular zone-expresse ( 833) 5433 1018.9 0
XP_011511437 (OMIM: 609594) PREDICTED: ventricular ( 788) 5153 967.0 0
XP_011511436 (OMIM: 609594) PREDICTED: ventricular ( 844) 5153 967.0 0
NP_001161383 (OMIM: 609594) ventricular zone-expre ( 788) 4054 763.2 0
NP_001161387 (OMIM: 609594) ventricular zone-expre ( 213) 1138 222.3 1.8e-57
NP_001161388 (OMIM: 609594) ventricular zone-expre ( 213) 1138 222.3 1.8e-57
NP_001161389 (OMIM: 609594) ventricular zone-expre ( 177) 1130 220.8 4.3e-57
>>NP_001161384 (OMIM: 609594) ventricular zone-expressed (833 aa)
initn: 5433 init1: 5433 opt: 5433 Z-score: 5447.2 bits: 1018.9 E(85289): 0
Smith-Waterman score: 5433; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)
10 20 30 40 50 60
pF1KA1 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LIGHLKDSTHNDIILNILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIGHLKDSTHNDIILNILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 DEERARSCLTYLVSQLANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEERARSCLTYLVSQLANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 KLLTRQLENTKAGSGRRKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLTRQLENTKAGSGRRKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 NTPGSIRRYSLGQVSKEERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTPGSIRRYSLGQVSKEERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 EIDPLGQGNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIDPLGQGNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 IEYQDKLYLHLKKNLSKVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEYQDKLYLHLKKNLSKVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 YSKSSFILISQEPQPWIQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YSKSSFILISQEPQPWIQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 MMESTFPQQKDLDQVQLHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MMESTFPQQKDLDQVQLHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 GKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRR
730 740 750 760 770 780
790 800 810 820 830
pF1KA1 DRSLPRAFEIFTDNKTYVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRSLPRAFEIFTDNKTYVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
790 800 810 820 830
>>NP_078897 (OMIM: 609594) ventricular zone-expressed PH (833 aa)
initn: 5433 init1: 5433 opt: 5433 Z-score: 5447.2 bits: 1018.9 E(85289): 0
Smith-Waterman score: 5433; 100.0% identity (100.0% similar) in 833 aa overlap (1-833:1-833)
10 20 30 40 50 60
pF1KA1 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LIGHLKDSTHNDIILNILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 LIGHLKDSTHNDIILNILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 DEERARSCLTYLVSQLANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 DEERARSCLTYLVSQLANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 KLLTRQLENTKAGSGRRKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 KLLTRQLENTKAGSGRRKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 NTPGSIRRYSLGQVSKEERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 NTPGSIRRYSLGQVSKEERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 EIDPLGQGNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 EIDPLGQGNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 IEYQDKLYLHLKKNLSKVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 IEYQDKLYLHLKKNLSKVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 YSKSSFILISQEPQPWIQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 YSKSSFILISQEPQPWIQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 MMESTFPQQKDLDQVQLHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 MMESTFPQQKDLDQVQLHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 GKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 GKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRR
730 740 750 760 770 780
790 800 810 820 830
pF1KA1 DRSLPRAFEIFTDNKTYVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 DRSLPRAFEIFTDNKTYVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
790 800 810 820 830
>>XP_011511437 (OMIM: 609594) PREDICTED: ventricular zon (788 aa)
initn: 5153 init1: 5153 opt: 5153 Z-score: 5167.0 bits: 967.0 E(85289): 0
Smith-Waterman score: 5153; 100.0% identity (100.0% similar) in 787 aa overlap (47-833:2-788)
20 30 40 50 60 70
pF1KA1 AGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEICITRITTAIRETESIE
::::::::::::::::::::::::::::::
XP_011 MDYQTNNNDQAVVEICITRITTAIRETESIE
10 20 30
80 90 100 110 120 130
pF1KA1 KHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNYNRPPVMALAIPIAVKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNYNRPPVMALAIPIAVKF
40 50 60 70 80 90
140 150 160 170 180 190
pF1KA1 LHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTMLLRVLPAVYEKQPQPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTMLLRVLPAVYEKQPQPI
100 110 120 130 140 150
200 210 220 230 240 250
pF1KA1 NRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPFLIGHLKDSTHNDIILN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPFLIGHLKDSTHNDIILN
160 170 180 190 200 210
260 270 280 290 300 310
pF1KA1 ILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHVDEERARSCLTYLVSQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHVDEERARSCLTYLVSQL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KA1 ANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIAKLLTRQLENTKAGSGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIAKLLTRQLENTKAGSGR
280 290 300 310 320 330
380 390 400 410 420 430
pF1KA1 RKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGSNTPGSIRRYSLGQVSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGSNTPGSIRRYSLGQVSK
340 350 360 370 380 390
440 450 460 470 480 490
pF1KA1 EERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLSEIDPLGQGNDKLPFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLSEIDPLGQGNDKLPFKT
400 410 420 430 440 450
500 510 520 530 540 550
pF1KA1 DTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKLYLHLKKNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKLYLHLKKNLS
460 470 480 490 500 510
560 570 580 590 600 610
pF1KA1 KVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCLYSKSSFILISQEPQPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCLYSKSSFILISQEPQPW
520 530 540 550 560 570
620 630 640 650 660 670
pF1KA1 IQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETAMMESTFPQQKDLDQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETAMMESTFPQQKDLDQVQ
580 590 600 610 620 630
680 690 700 710 720 730
pF1KA1 LHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIEGKLKEKQVRWKFIKRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIEGKLKEKQVRWKFIKRW
640 650 660 670 680 690
740 750 760 770 780 790
pF1KA1 KTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRRDRSLPRAFEIFTDNKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRRDRSLPRAFEIFTDNKT
700 710 720 730 740 750
800 810 820 830
pF1KA1 YVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
:::::::::::::::::::::::::::::::::::::
XP_011 YVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
760 770 780
>>XP_011511436 (OMIM: 609594) PREDICTED: ventricular zon (844 aa)
initn: 5153 init1: 5153 opt: 5153 Z-score: 5166.5 bits: 967.0 E(85289): 0
Smith-Waterman score: 5153; 100.0% identity (100.0% similar) in 787 aa overlap (47-833:58-844)
20 30 40 50 60 70
pF1KA1 AGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEICITRITTAIRETESIE
::::::::::::::::::::::::::::::
XP_011 LERMRWGERRESRKKYVLNGRSTFLDYFLCDYQTNNNDQAVVEICITRITTAIRETESIE
30 40 50 60 70 80
80 90 100 110 120 130
pF1KA1 KHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNYNRPPVMALAIPIAVKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNYNRPPVMALAIPIAVKF
90 100 110 120 130 140
140 150 160 170 180 190
pF1KA1 LHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTMLLRVLPAVYEKQPQPI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTMLLRVLPAVYEKQPQPI
150 160 170 180 190 200
200 210 220 230 240 250
pF1KA1 NRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPFLIGHLKDSTHNDIILN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPFLIGHLKDSTHNDIILN
210 220 230 240 250 260
260 270 280 290 300 310
pF1KA1 ILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHVDEERARSCLTYLVSQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHVDEERARSCLTYLVSQL
270 280 290 300 310 320
320 330 340 350 360 370
pF1KA1 ANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIAKLLTRQLENTKAGSGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIAKLLTRQLENTKAGSGR
330 340 350 360 370 380
380 390 400 410 420 430
pF1KA1 RKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGSNTPGSIRRYSLGQVSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGSNTPGSIRRYSLGQVSK
390 400 410 420 430 440
440 450 460 470 480 490
pF1KA1 EERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLSEIDPLGQGNDKLPFKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLSEIDPLGQGNDKLPFKT
450 460 470 480 490 500
500 510 520 530 540 550
pF1KA1 DTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKLYLHLKKNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASPIEYQDKLYLHLKKNLS
510 520 530 540 550 560
560 570 580 590 600 610
pF1KA1 KVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCLYSKSSFILISQEPQPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCLYSKSSFILISQEPQPW
570 580 590 600 610 620
620 630 640 650 660 670
pF1KA1 IQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETAMMESTFPQQKDLDQVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETAMMESTFPQQKDLDQVQ
630 640 650 660 670 680
680 690 700 710 720 730
pF1KA1 LHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIEGKLKEKQVRWKFIKRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIEGKLKEKQVRWKFIKRW
690 700 710 720 730 740
740 750 760 770 780 790
pF1KA1 KTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRRDRSLPRAFEIFTDNKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRRDRSLPRAFEIFTDNKT
750 760 770 780 790 800
800 810 820 830
pF1KA1 YVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
:::::::::::::::::::::::::::::::::::::
XP_011 YVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
810 820 830 840
>>NP_001161383 (OMIM: 609594) ventricular zone-expressed (788 aa)
initn: 4037 init1: 4037 opt: 4054 Z-score: 4065.9 bits: 763.2 E(85289): 0
Smith-Waterman score: 5033; 94.6% identity (94.6% similar) in 833 aa overlap (1-833:1-788)
10 20 30 40 50 60
pF1KA1 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 LIGHLKDSTHNDIILNILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIGHLKDSTHNDIILNILIEIAVYEPVALNSFLPMLKEIGERFPYLTGQMARIYGAVGHV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 DEERARSCLTYLVSQLANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEERARSCLTYLVSQLANMEHSFHHILLLEIKSITDTFSSILGPQSRDIFRMSNSFTAIA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 KLLTRQLENTKAGSGRRKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLLTRQLENTKAGSGRRKISTEIEFPEKLEETKLIVTENEDHEKLQVKIQAFEDKINAGS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 NTPGSIRRYSLGQVSKEERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTPGSIRRYSLGQVSKEERKNIRFNRSKSLAFHTMLTKGVGSDDGEDENRGDIPASISLS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 EIDPLGQGNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIDPLGQGNDKLPFKTDTERSQLGESSVSYPNIIHIDSENLSETVKENSQEETPETTASP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 IEYQDKLYLHLKKNLSKVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEYQDKLYLHLKKNLSKVKAYAMEIGKKIPVPDQCTIEDTVRSCVAKLFFTCSLKGHYCL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 YSKSSFILISQEPQPWIQIMFLFQQSLFPEPLSIQSHSVQFLRALWEKTQAGGAHSFETA
:::::::::::::::::::::::::
NP_001 YSKSSFILISQEPQPWIQIMFLFQQ-----------------------------------
610 620
670 680 690 700 710 720
pF1KA1 MMESTFPQQKDLDQVQLHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIE
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ----------DLDQVQLHLEEVRFFDVFGFSETAGAWQCFMCNNPEKATVVNQDGQPLIE
630 640 650 660 670
730 740 750 760 770 780
pF1KA1 GKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKLKEKQVRWKFIKRWKTRYFTLAGNQLLFQKGKSKDDPDDCPIELSKVQSVKAVAKKRR
680 690 700 710 720 730
790 800 810 820 830
pF1KA1 DRSLPRAFEIFTDNKTYVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRSLPRAFEIFTDNKTYVFKAKDEKNAEEWLQCINVAVAQAKERESREVTTYL
740 750 760 770 780
>>NP_001161387 (OMIM: 609594) ventricular zone-expressed (213 aa)
initn: 1138 init1: 1138 opt: 1138 Z-score: 1152.9 bits: 222.3 E(85289): 1.8e-57
Smith-Waterman score: 1138; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KA1 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGMVR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
NP_001 KLSLGTCFGRYLKVFSSSIYGLWEARPRVLEAN
190 200 210
>>NP_001161388 (OMIM: 609594) ventricular zone-expressed (213 aa)
initn: 1138 init1: 1138 opt: 1138 Z-score: 1152.9 bits: 222.3 E(85289): 1.8e-57
Smith-Waterman score: 1138; 100.0% identity (100.0% similar) in 177 aa overlap (1-177:1-177)
10 20 30 40 50 60
pF1KA1 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGMVR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
NP_001 KLSLGTCFGRYLKVFSSSIYGLWEARPRVLEAN
190 200 210
>>NP_001161389 (OMIM: 609594) ventricular zone-expressed (177 aa)
initn: 1130 init1: 1130 opt: 1130 Z-score: 1146.1 bits: 220.8 E(85289): 4.3e-57
Smith-Waterman score: 1130; 100.0% identity (100.0% similar) in 176 aa overlap (1-176:1-176)
10 20 30 40 50 60
pF1KA1 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHQLFRLVLGQKDLSRAGDLFSLDDSEIEDSLTEALEQIKIISSSSDYQTNNNDQAVVEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CITRITTAIRETESIEKHAKALVGLWDSCLEHNLRPFGKDEDTPHAKIASDIMSCILQNY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQGNTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRPPVMALAIPIAVKFLHRGNKELCRNMSNYLSLAAITKADLLADHTEVIVKSILQV
130 140 150 160 170
190 200 210 220 230 240
pF1KA1 LLRVLPAVYEKQPQPINRHLTELLALMSQLEQPEQYHLLRLLHVAAKKKQLEVVQKCIPF
833 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:51:59 2016 done: Wed Nov 2 21:52:00 2016
Total Scan time: 10.360 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]