Result of FASTA (ccds) for
pF1KA1741
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1741, 1729 aa
1>>>pF1KA1741 1729 - 1729 aa - 1729 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.9142+/-0.00117; mu= -9.0550+/- 0.070
mean_var=467.8713+/-96.416, 0's: 0 Z-trim(115.1): 31 B-trim: 159 in 1/51
Lambda= 0.059294
statistics sampled from 15618 (15645) to 15618 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.481), width: 16
Scan time: 8.190
The best scores are: opt bits E(32554)
CCDS7951.1 TNKS1BP1 gene_id:85456|Hs108|chr11 (1729) 11842 1028.9 0
>>CCDS7951.1 TNKS1BP1 gene_id:85456|Hs108|chr11 (1729 aa)
initn: 11842 init1: 11842 opt: 11842 Z-score: 5490.1 bits: 1028.9 E(32554): 0
Smith-Waterman score: 11842; 100.0% identity (100.0% similar) in 1729 aa overlap (1-1729:1-1729)
10 20 30 40 50 60
pF1KA1 MKVSTLRESSAMASPLPREMEEELVPTGSEPGDTRAKPPVKPKPRALPAKPALPAKPSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 MKVSTLRESSAMASPLPREMEEELVPTGSEPGDTRAKPPVKPKPRALPAKPALPAKPSLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 VPVGPRPPRGPLAELPSARKMNMLAGPQPYGGSKRPLPFAPRPAVEASTGGEATQETGKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 VPVGPRPPRGPLAELPSARKMNMLAGPQPYGGSKRPLPFAPRPAVEASTGGEATQETGKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 EAGKEEPPPLTPPARCAAPGGVRKAPAPFRPASERFAATTVEEILAKMEQPRKEVLASPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 EAGKEEPPPLTPPARCAAPGGVRKAPAPFRPASERFAATTVEEILAKMEQPRKEVLASPD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RLWGSRLTFNHDGSSRYGPRTYGTTTAPRDEDGSTLFRGWSQEGPVKSPAECREEHSKTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 RLWGSRLTFNHDGSSRYGPRTYGTTTAPRDEDGSTLFRGWSQEGPVKSPAECREEHSKTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 EERSLPSDLAFNGDLAKAASSELPADISKPWIPSSPAPSSENGGPASPGLPAEASGSGPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 EERSLPSDLAFNGDLAKAASSELPADISKPWIPSSPAPSSENGGPASPGLPAEASGSGPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 SPHLHPPDKSSPCHSQLLEAQTPEASQASPCPAVTPSAPSAALPDEGSRHTPSPGLPAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 SPHLHPPDKSSPCHSQLLEAQTPEASQASPCPAVTPSAPSAALPDEGSRHTPSPGLPAEG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 APEAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTRTFPSGGEEEAKGDAHLRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 APEAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTRTFPSGGEEEAKGDAHLRP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 TSLVQRRFSEGVLQSPSQDQEKLGGSLAALPQGQGSQLALDRPFGAESNWSLSQSFEWTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 TSLVQRRFSEGVLQSPSQDQEKLGGSLAALPQGQGSQLALDRPFGAESNWSLSQSFEWTF
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 PTRPSGLGVWRLDSPPPSPITEASEAAEAAEAGNLAVSSREEGVSQQGQGAGSAPSGSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 PTRPSGLGVWRLDSPPPSPITEASEAAEAAEAGNLAVSSREEGVSQQGQGAGSAPSGSGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 SWVQGDDPSMSLTQKGDGESQPQFPAVPLEPLPTTEGTPGLPLQQAEERYESQEPLAGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 SWVQGDDPSMSLTQKGDGESQPQFPAVPLEPLPTTEGTPGLPLQQAEERYESQEPLAGQE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 SPLPLATREAALPILEPVLGQEQPAAPDQPCVLFADAPEPGQALPVEEEAVTLARAETTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 SPLPLATREAALPILEPVLGQEQPAAPDQPCVLFADAPEPGQALPVEEEAVTLARAETTQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 ARTEAQDLCRASPEPPGPESSSRWLDDLLASPPPSGGGARRGAGAELKDTQSPSTCSEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 ARTEAQDLCRASPEPPGPESSSRWLDDLLASPPPSGGGARRGAGAELKDTQSPSTCSEGL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 LGWSQKDLQSEFGITGDPQPSSFSPSSWCQGASQDYGLGGASPRGDPGLGERDWTSKYGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 LGWSQKDLQSEFGITGDPQPSSFSPSSWCQGASQDYGLGGASPRGDPGLGERDWTSKYGQ
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 GAGEGSTREWASRCGIGQEEMEASSSQDQSKVSAPGVLTAQDRVVGKPAQLGTQRSQEAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 GAGEGSTREWASRCGIGQEEMEASSSQDQSKVSAPGVLTAQDRVVGKPAQLGTQRSQEAD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 VQDWEFRKRDSQGTYSSRDAELQDQEFGKRDSLGTYSSRDVSLGDWEFGKRDSLGAYASQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 VQDWEFRKRDSQGTYSSRDAELQDQEFGKRDSLGTYSSRDVSLGDWEFGKRDSLGAYASQ
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 DANEQGQDLGKRDHHGRYSSQDADEQDWEFQKRDVSLGTYGSRAAEPQEQEFGKSAWIRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 DANEQGQDLGKRDHHGRYSSQDADEQDWEFQKRDVSLGTYGSRAAEPQEQEFGKSAWIRD
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 YSSGGSSRTLDAQDRSFGTRPLSSGFSPEEAQQQDEEFEKKIPSVEDSLGEGSRDAGRPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 YSSGGSSRTLDAQDRSFGTRPLSSGFSPEEAQQQDEEFEKKIPSVEDSLGEGSRDAGRPG
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 ERGSGGLFSPSTAHVPDGALGQRDQSSWQNSDASQEVGGHQERQQAGAQGPGSADLEDGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 ERGSGGLFSPSTAHVPDGALGQRDQSSWQNSDASQEVGGHQERQQAGAQGPGSADLEDGE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 MGKRGWVGEFSLSVGPQREAAFSPGQQDWSRDFCIEASERSYQFGIIGNDRVSGAGFSPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 MGKRGWVGEFSLSVGPQREAAFSPGQQDWSRDFCIEASERSYQFGIIGNDRVSGAGFSPS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 SKMEGGHFVPPGKTTAGSVDWTDQLGLRNLEVSSCVGSGGSSEARESAVGQMGWSGGLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 SKMEGGHFVPPGKTTAGSVDWTDQLGLRNLEVSSCVGSGGSSEARESAVGQMGWSGGLSL
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 RDMNLTGCLESGGSEEPGGIGVGEKDWTSDVNVKSKDLAEVGEGGGHSQARESGVGQTDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 RDMNLTGCLESGGSEEPGGIGVGEKDWTSDVNVKSKDLAEVGEGGGHSQARESGVGQTDW
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 SGVEAGEFLKSRERGVGQADWTPDLGLRNMAPGAVCSPGESKELGVGQMDWGNNLGLRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 SGVEAGEFLKSRERGVGQADWTPDLGLRNMAPGAVCSPGESKELGVGQMDWGNNLGLRDL
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA1 EVTCDPDSGGSQGLRGCGVGQMDWTQDLAPQNVELFGAPSEAREHGVGGVSQCPEPGLRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 EVTCDPDSGGSQGLRGCGVGQMDWTQDLAPQNVELFGAPSEAREHGVGGVSQCPEPGLRH
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA1 NGSLSPGLEARDPLEARELGVGETSGPETQGEDYSSSSLEPHPADPGMETGEALSFGASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 NGSLSPGLEARDPLEARELGVGETSGPETQGEDYSSSSLEPHPADPGMETGEALSFGASP
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA1 GRCPARPPPSGSQGLLEEMLAASSSKAVARRESAASGLGGLLEEEGAGAGAAQEEVLEPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 GRCPARPPPSGSQGLLEEMLAASSSKAVARRESAASGLGGLLEEEGAGAGAAQEEVLEPG
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA1 RDSPPSWRPQPDGEASQTEDVDGTWGSSAARWSDQGPAQTSRRPSQGPPARSPSQDFSFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 RDSPPSWRPQPDGEASQTEDVDGTWGSSAARWSDQGPAQTSRRPSQGPPARSPSQDFSFI
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA1 EDTEILDSAMYRSRANLGRKRGHRAPVIRPGGTLGLSEAADSDAHLFQDSTEPRASRVPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 EDTEILDSAMYRSRANLGRKRGHRAPVIRPGGTLGLSEAADSDAHLFQDSTEPRASRVPS
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA1 SDEEVVEEPQSRRTRMSLGTKGLKVNLFPGLSPSALKAKLRPRNRSAEEGELAESKSSQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 SDEEVVEEPQSRRTRMSLGTKGLKVNLFPGLSPSALKAKLRPRNRSAEEGELAESKSSQK
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720
pF1KA1 ESAVQRSKSCKVPGLGKPLTLPPKPEKSSGSEGSSPNWLQALKLKKKKV
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 ESAVQRSKSCKVPGLGKPLTLPPKPEKSSGSEGSSPNWLQALKLKKKKV
1690 1700 1710 1720
1729 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:57:18 2016 done: Wed Nov 2 21:57:19 2016
Total Scan time: 8.190 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]