FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1746, 1094 aa
  1>>>pF1KA1746 1094 - 1094 aa - 1094 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6705+/-0.000982; mu= 14.8913+/- 0.059
 mean_var=80.9545+/-16.356, 0's: 0 Z-trim(105.5): 23  B-trim: 0 in 0/51
 Lambda= 0.142546
 statistics sampled from 8462 (8471) to 8462 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.26), width:  16
 Scan time:  4.340

The best scores are:                                      opt bits E(32554)
CCDS45516.1 TANGO6 gene_id:79613|Hs108|chr16       (1094) 7084 1467.1       0


>>CCDS45516.1 TANGO6 gene_id:79613|Hs108|chr16            (1094 aa)
 initn: 7084 init1: 7084 opt: 7084  Z-score: 7865.4  bits: 1467.1 E(32554):    0
Smith-Waterman score: 7084; 100.0% identity (100.0% similar) in 1094 aa overlap (1-1094:1-1094)

               10        20        30        40        50        60
pF1KA1 MAARQAVGSGAQETCGLDRILEALKLLLSPGGSGSSSLQVTKHDVLLATLKSNLSALEDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAARQAVGSGAQETCGLDRILEALKLLLSPGGSGSSSLQVTKHDVLLATLKSNLSALEDK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 FLKDPQWKNLKLLRDEIADKAEWPQNSVDVTWSFTSQTLLLLLCLKETMIRLAANFNPGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FLKDPQWKNLKLLRDEIADKAEWPQNSVDVTWSFTSQTLLLLLCLKETMIRLAANFNPGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 PNPRTPEVAPALSPDALSISQQKTVQFVLQFVVTLGICPYLMPGVGVPLRYRTEFGAVVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PNPRTPEVAPALSPDALSISQQKTVQFVLQFVVTLGICPYLMPGVGVPLRYRTEFGAVVQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 DVVCFDAAPDATRRLYTSCKALLNVAQHTSLGSLIFCHHFGDIAAGLCQLGFCPTKRKLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DVVCFDAAPDATRRLYTSCKALLNVAQHTSLGSLIFCHHFGDIAAGLCQLGFCPTKRKLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 TPAEEVLTEEERTLSRGALRDMLDQVYQPLAVRELLILQGGPPQSCTDVKTQMRCRAPAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TPAEEVLTEEERTLSRGALRDMLDQVYQPLAVRELLILQGGPPQSCTDVKTQMRCRAPAW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 LRRLCGQLLSERLMRPNGVQAVVRGILEGAGAGAAGGSDAEVTAADWKKCDLIAKILASC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LRRLCGQLLSERLMRPNGVQAVVRGILEGAGAGAAGGSDAEVTAADWKKCDLIAKILASC
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PQQSLSPENYYRDICPQVLDLFHFQDKLTARQFQRVATTTFITLSRERPHLAAKYLLQPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PQQSLSPENYYRDICPQVLDLFHFQDKLTARQFQRVATTTFITLSRERPHLAAKYLLQPV
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 LAPLHRCLNTAELSESDMVPGTILVTEEELSRCIEDVFKVYVVGNEPLTVLMDSLLPVLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LAPLHRCLNTAELSESDMVPGTILVTEEELSRCIEDVFKVYVVGNEPLTVLMDSLLPVLG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 VLFLLYCFTKQSVSHIRSLCQEILLWILGKLERKKAIASLKGFAGLDKAVPSLHSLCQFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VLFLLYCFTKQSVSHIRSLCQEILLWILGKLERKKAIASLKGFAGLDKAVPSLHSLCQFR
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 VATQGGIMITIKEAISDEDEDEALYQKVSSEQGRVEHLGDLLSHCQECGLAGDFFIFCLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VATQGGIMITIKEAISDEDEDEALYQKVSSEQGRVEHLGDLLSHCQECGLAGDFFIFCLK
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA1 ELTHVASENETELKTEPFSSKSLLELEQHQTLLVEGQERKLLVLQLMAVLCERMSEQIFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ELTHVASENETELKTEPFSSKSLLELEQHQTLLVEGQERKLLVLQLMAVLCERMSEQIFT
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA1 NVTQVVDFVAATLQRACASLAHQAESTVESQTLSMSMGLVAVMLGGAVQLKSSDFAVLKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NVTQVVDFVAATLQRACASLAHQAESTVESQTLSMSMGLVAVMLGGAVQLKSSDFAVLKQ
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA1 LLPLLEKVSNTYPDPVIQELAVDLRITISTHGAFATEAVSMAAQSTLNRKDLEGKIEEQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLPLLEKVSNTYPDPVIQELAVDLRITISTHGAFATEAVSMAAQSTLNRKDLEGKIEEQQ
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA1 QTSHERPTDVAHSHLEQQQSHETAPQTGLQSNAPIIPQGVNEPSTTTSQKSGSVTTEQLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QTSHERPTDVAHSHLEQQQSHETAPQTGLQSNAPIIPQGVNEPSTTTSQKSGSVTTEQLQ
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA1 EVLLSAYDPQIPTRAAALRTLSHWIEQREAKALEMQEKLLKIFLENLEHEDTFVYLSAIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EVLLSAYDPQIPTRAAALRTLSHWIEQREAKALEMQEKLLKIFLENLEHEDTFVYLSAIQ
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA1 GVALLSDVYPEKILPDLLAQYDSSKDKHTPETRMKVGEVLMRIVRALGDMVSKYREPLIH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GVALLSDVYPEKILPDLLAQYDSSKDKHTPETRMKVGEVLMRIVRALGDMVSKYREPLIH
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KA1 TFLRGVRDPDGAHRASSLANLGELCQRLDFLLGSVVHEVTACLIAVAKTDGEVQVRRAAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TFLRGVRDPDGAHRASSLANLGELCQRLDFLLGSVVHEVTACLIAVAKTDGEVQVRRAAI
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KA1 HVVVLLLRGLSQKATEVLSAVLKDLYHLLKHVVCLEPDDVAKLHAQLALEELDDIMKNFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HVVVLLLRGLSQKATEVLSAVLKDLYHLLKHVVCLEPDDVAKLHAQLALEELDDIMKNFL
             1030      1040      1050      1060      1070      1080

             1090    
pF1KA1 FPPQKLEKKIMVLP
       ::::::::::::::
CCDS45 FPPQKLEKKIMVLP
             1090    




1094 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 01:45:49 2016 done: Fri Nov  4 01:45:50 2016
 Total Scan time:  4.340 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]