FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA1762, 1522 aa 1>>>pF1KA1762 1522 - 1522 aa - 1522 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.8393+/-0.00103; mu= -5.7707+/- 0.063 mean_var=533.6251+/-110.198, 0's: 0 Z-trim(117.8): 34 B-trim: 0 in 0/55 Lambda= 0.055521 statistics sampled from 18610 (18635) to 18610 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.802), E-opt: 0.2 (0.572), width: 16 Scan time: 5.750 The best scores are: opt bits E(32554) CCDS55907.1 ZFHX2 gene_id:85446|Hs108|chr14 (2572) 10472 854.7 0 >>CCDS55907.1 ZFHX2 gene_id:85446|Hs108|chr14 (2572 aa) initn: 10472 init1: 10472 opt: 10472 Z-score: 4546.5 bits: 854.7 E(32554): 0 Smith-Waterman score: 10472; 100.0% identity (100.0% similar) in 1522 aa overlap (1-1522:1051-2572) 10 20 30 pF1KA1 MTFTTKVLSAPTLSPLDNGQEPPTHGPEPT :::::::::::::::::::::::::::::: CCDS55 RPALHFHLSHLHNVVPECVEKLLLVATTVEMTFTTKVLSAPTLSPLDNGQEPPTHGPEPT 1030 1040 1050 1060 1070 1080 40 50 60 70 80 90 pF1KA1 PSRDQAAEGPNLTPEASPDPLPEPPLASVEVPDKPSGSPGQPPSPAPSPVPEPDAQAEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PSRDQAAEGPNLTPEASPDPLPEPPLASVEVPDKPSGSPGQPPSPAPSPVPEPDAQAEDV 1090 1100 1110 1120 1130 1140 100 110 120 130 140 150 pF1KA1 APPPTMAEEEEGTTGELRSAEPAPADSRHPLTYRKTTNFALDKFLDPARPYKCTVCKESF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 APPPTMAEEEEGTTGELRSAEPAPADSRHPLTYRKTTNFALDKFLDPARPYKCTVCKESF 1150 1160 1170 1180 1190 1200 160 170 180 190 200 210 pF1KA1 TQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTVCRVSYNQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 TQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTVCRVSYNQS 1210 1220 1230 1240 1250 1260 220 230 240 250 260 270 pF1KA1 STLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGETEGEVGTEKKGPDTSGFISGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 STLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGETEGEVGTEKKGPDTSGFISGL 1270 1280 1290 1300 1310 1320 280 290 300 310 320 330 pF1KA1 PFLSPPPPPLDLHRFPAPLFTPPVLPPFPLVPESLLKLQQQQLLLPFYLHDLKVGPKLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PFLSPPPPPLDLHRFPAPLFTPPVLPPFPLVPESLLKLQQQQLLLPFYLHDLKVGPKLTL 1330 1340 1350 1360 1370 1380 340 350 360 370 380 390 pF1KA1 AGPAPVLSLPAATPPPPPQPPKAELAEREWERPPMAKEGNEAGPSSPPDPLPNEAARTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 AGPAPVLSLPAATPPPPPQPPKAELAEREWERPPMAKEGNEAGPSSPPDPLPNEAARTAA 1390 1400 1410 1420 1430 1440 400 410 420 430 440 450 pF1KA1 KALLENFGFELVIQYNEGKQAVPPPPTPPPPEALGGGDKLACGACGKLFSNMLILKTHEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KALLENFGFELVIQYNEGKQAVPPPPTPPPPEALGGGDKLACGACGKLFSNMLILKTHEE 1450 1460 1470 1480 1490 1500 460 470 480 490 500 510 pF1KA1 HVHRRFLPFEALSRYAAQFRKSYDSLYPPLAEPPKPPDGSLDSPVPHLGPPFLVPEPEAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 HVHRRFLPFEALSRYAAQFRKSYDSLYPPLAEPPKPPDGSLDSPVPHLGPPFLVPEPEAG 1510 1520 1530 1540 1550 1560 520 530 540 550 560 570 pF1KA1 GTRAPEERSRAGGHWPIEEEESSRGNLPPLVPAGRRFSRTKFTEFQTQALQSFFETSAYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GTRAPEERSRAGGHWPIEEEESSRGNLPPLVPAGRRFSRTKFTEFQTQALQSFFETSAYP 1570 1580 1590 1600 1610 1620 580 590 600 610 620 630 pF1KA1 KDGEVERLASLLGLASRVVVVWFQNARQKARKNACEGGSMPTGGGTGGASGCRRCHATFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KDGEVERLASLLGLASRVVVVWFQNARQKARKNACEGGSMPTGGGTGGASGCRRCHATFS 1630 1640 1650 1660 1670 1680 640 650 660 670 680 690 pF1KA1 CVFELVRHLKKCYDDQTLEEEEEEAERGEEEEEVEEEEVEEEQGLEPPAGPEGPLPEPPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 CVFELVRHLKKCYDDQTLEEEEEEAERGEEEEEVEEEEVEEEQGLEPPAGPEGPLPEPPD 1690 1700 1710 1720 1730 1740 700 710 720 730 740 750 pF1KA1 GEELSQAEATKAGGKEPEEKATPSPSPAHTCDQCAISFSSQDLLTSHRRLHFLPSLQPSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GEELSQAEATKAGGKEPEEKATPSPSPAHTCDQCAISFSSQDLLTSHRRLHFLPSLQPSA 1750 1760 1770 1780 1790 1800 760 770 780 790 800 810 pF1KA1 PPQLLDLPLLVFGERNPLVAATSPMPGPPLKRKHEDGSLSPTGSEAGGGGEGEPPRDKRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PPQLLDLPLLVFGERNPLVAATSPMPGPPLKRKHEDGSLSPTGSEAGGGGEGEPPRDKRL 1810 1820 1830 1840 1850 1860 820 830 840 850 860 870 pF1KA1 RTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERKGQFRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 RTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERKGQFRST 1870 1880 1890 1900 1910 1920 880 890 900 910 920 930 pF1KA1 PGGVPSPAVKPPATATPASLPKFNLLLGKVDDGTGREAPKREAPAFPYPTATLASGPQPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PGGVPSPAVKPPATATPASLPKFNLLLGKVDDGTGREAPKREAPAFPYPTATLASGPQPF 1930 1940 1950 1960 1970 1980 940 950 960 970 980 990 pF1KA1 LPPGKEATTPTPEPPLPLLPPPPPSEEEGPEEPPKASPESEACSLSAGDLSDSSASSLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LPPGKEATTPTPEPPLPLLPPPPPSEEEGPEEPPKASPESEACSLSAGDLSDSSASSLAE 1990 2000 2010 2020 2030 2040 1000 1010 1020 1030 1040 1050 pF1KA1 PESPGAGGTSGGPGGGTGVPDGMGQRRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PESPGAGGTSGGPGGGTGVPDGMGQRRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGE 2050 2060 2070 2080 2090 2100 1060 1070 1080 1090 1100 1110 pF1KA1 EIGLPKRVIQVWFQNARAKEKKAKLQGTAAGSTGGSSEGLLAAQRTDCPYCDVKYDFYVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EIGLPKRVIQVWFQNARAKEKKAKLQGTAAGSTGGSSEGLLAAQRTDCPYCDVKYDFYVS 2110 2120 2130 2140 2150 2160 1120 1130 1140 1150 1160 1170 pF1KA1 CRGHLFSRQHLAKLKEAVRAQLKSESKCYDLAPAPEAPPALKAPPATTPASMPLGAAPTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 CRGHLFSRQHLAKLKEAVRAQLKSESKCYDLAPAPEAPPALKAPPATTPASMPLGAAPTL 2170 2180 2190 2200 2210 2220 1180 1190 1200 1210 1220 1230 pF1KA1 PRLAPVLLSGPALAQPPLGNLAPFNSGPAASSGLLGLATSVLPTTTVVQTAGPGRPLPQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PRLAPVLLSGPALAQPPLGNLAPFNSGPAASSGLLGLATSVLPTTTVVQTAGPGRPLPQR 2230 2240 2250 2260 2270 2280 1240 1250 1260 1270 1280 1290 pF1KA1 PMPDQTNTSTAGTTDPVPGPPTEPLGDKVSSERKPVAGPTSSSNDALKNLKALKTTVPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PMPDQTNTSTAGTTDPVPGPPTEPLGDKVSSERKPVAGPTSSSNDALKNLKALKTTVPAL 2290 2300 2310 2320 2330 2340 1300 1310 1320 1330 1340 1350 pF1KA1 LGGQFLPFPLPPAGGTAPPAVFGPQLQGAYFQQLYGMKKGLFPMNPMIPQTLIGLLPNAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LGGQFLPFPLPPAGGTAPPAVFGPQLQGAYFQQLYGMKKGLFPMNPMIPQTLIGLLPNAL 2350 2360 2370 2380 2390 2400 1360 1370 1380 1390 1400 1410 pF1KA1 LQPPPQPPEPTATAPPKPPELPAPGEGEAGEVDELLTGSTGISTVDVTHRYLCRQCKMAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LQPPPQPPEPTATAPPKPPELPAPGEGEAGEVDELLTGSTGISTVDVTHRYLCRQCKMAF 2410 2420 2430 2440 2450 2460 1420 1430 1440 1450 1460 1470 pF1KA1 DGEAPATAHQRSFCFFGRGSGGSMPPPLRVPICTYHCLACEVLLSGREALASHLRSSAHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DGEAPATAHQRSFCFFGRGSGGSMPPPLRVPICTYHCLACEVLLSGREALASHLRSSAHR 2470 2480 2490 2500 2510 2520 1480 1490 1500 1510 1520 pF1KA1 RKAAPPQGGPPISITNAATAASAAVAFAKEEARLPHTDSNPKTTTTSTLLAL :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 RKAAPPQGGPPISITNAATAASAAVAFAKEEARLPHTDSNPKTTTTSTLLAL 2530 2540 2550 2560 2570 1522 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Nov 2 22:00:57 2016 done: Wed Nov 2 22:00:58 2016 Total Scan time: 5.750 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]