Result of FASTA (ccds) for
pF1KA1840
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1840, 2443 aa
1>>>pF1KA1840 2443 - 2443 aa - 2443 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2863+/-0.00121; mu= 20.2824+/- 0.072
mean_var=70.6435+/-13.799, 0's: 0 Z-trim(100.8): 28 B-trim: 46 in 1/50
Lambda= 0.152594
statistics sampled from 6320 (6323) to 6320 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.52), E-opt: 0.2 (0.189), width: 16
Scan time: 3.470
The best scores are: opt bits E(33420)
CCDS10112.1 SPG11 gene_id:80208|Hs109|chr15 (2443) 16279 3594.3 0
CCDS53939.1 SPG11 gene_id:80208|Hs109|chr15 (2330) 13051 2883.6 0
>>CCDS10112.1 SPG11 gene_id:80208|Hs109|chr15 (2443 aa)
initn: 16279 init1: 16279 opt: 16279 Z-score: 19348.8 bits: 3594.3 E(33420): 0
Smith-Waterman score: 16279; 100.0% identity (100.0% similar) in 2443 aa overlap (1-2443:1-2443)
10 20 30 40 50 60
pF1KA1 MAAEEGVASAASAGGSWGTAAMGRVLPMLLVPVPAEAMGQLGSRAQLRTQPEALGSLTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MAAEEGVASAASAGGSWGTAAMGRVLPMLLVPVPAEAMGQLGSRAQLRTQPEALGSLTAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 GSLQVLSLTPGSRGGGRCCLEGPFWHFLWEDSRNSSTPTEKPKLLALGENYELLIYEFNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GSLQVLSLTPGSRGGGRCCLEGPFWHFLWEDSRNSSTPTEKPKLLALGENYELLIYEFNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 KDGRCDATILYSCSREALQKLIDDQDISISLLSLRILSFHNNTSLLFINKCVILHIIFPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KDGRCDATILYSCSREALQKLIDDQDISISLLSLRILSFHNNTSLLFINKCVILHIIFPE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RDAAIRVLNCFTLPLPAQAVDMIIDTQLCRGILFVLSSLGWIYIFDVVDGTYVAHVDLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RDAAIRVLNCFTLPLPAQAVDMIIDTQLCRGILFVLSSLGWIYIFDVVDGTYVAHVDLAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HKEDMCNEQQQEPAKISSFTSLKVSQDLDVAVIVSSSNSAVALNLNLYFRQHPGHLLCER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HKEDMCNEQQQEPAKISSFTSLKVSQDLDVAVIVSSSNSAVALNLNLYFRQHPGHLLCER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 ILEDLPIQGPKGVDEDDPVNSAYNMKLAKFSFQIDRSWKAQLSSLNETIKNSKLEVSCCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ILEDLPIQGPKGVDEDDPVNSAYNMKLAKFSFQIDRSWKAQLSSLNETIKNSKLEVSCCA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 PWFQDILHLESPESGNHSTSVQSWAFIPQDIMHGQYNVLQKDHAKTSDPGRSWKIMHISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PWFQDILHLESPESGNHSTSVQSWAFIPQDIMHGQYNVLQKDHAKTSDPGRSWKIMHISE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 QEEPIELKCVSVTGFTALFTWEVERMGYTITLWDLETQGMQCSSLGTKCIPVDSSGDQQL
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
CCDS10 QEEPIELKCVSVTGFTALFTWEVERMGYTITLWDLETQGMQCFSLGTKCIPVDSSGDQQL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 CFVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNGWGRCSIPIHALEAGIENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 CFVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNGWGRCSIPIHALEAGIENR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 QLDTVNFFLKSKENLFNPSSKSSVSDQFDHLSSHLYLRNVEELIPALDLLCSAIRESYSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QLDTVNFFLKSKENLFNPSSKSSVSDQFDHLSSHLYLRNVEELIPALDLLCSAIRESYSE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 PQSKHFSEQLLNLTLSFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PQSKHFSEQLLNLTLSFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 LTDAIDEYDVHENVPKVKESNIWKKLSFEEVIASAILNNKIPEAQTFFRIDSHSAQKLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LTDAIDEYDVHENVPKVKESNIWKKLSFEEVIASAILNNKIPEAQTFFRIDSHSAQKLEE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 LIGIGLNLVFDNLKKNNIKEASELLKNMGFDVKGQLLKICFYTTNKNIRDFLVEILKEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LIGIGLNLVFDNLKKNNIKEASELLKNMGFDVKGQLLKICFYTTNKNIRDFLVEILKEKN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 YFSEKEKRTIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YFSEKEKRTIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 EFNKQDHRIVLNWALWWDQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWLNIILWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EFNKQDHRIVLNWALWWDQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWLNIILWI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 GEFQTQHSYASLQQNKWPLLTVDVINQNTSCNNYMRNEILDKLARNGVFLASELEDFECF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GEFQTQHSYASLQQNKWPLLTVDVINQNTSCNNYMRNEILDKLARNGVFLASELEDFECF
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 LLRLSRIGGVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLSPENCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LLRLSRIGGVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLSPENCP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 FLEKKELHEAHPWFEFLVQCRQVASNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 FLEKKELHEAHPWFEFLVQCRQVASNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGH
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 TLLALATTMYSPGGVSQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTPPSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TLLALATTMYSPGGVSQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTPPSVL
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 PSDITIYHLIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PSDITIYHLIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFA
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 YYLHNGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVIGLSSFHIPSIGAACVCFLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YYLHNGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVIGLSSFHIPSIGAACVCFLEL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 LGLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESVAEKLSKLADGEKTTTEELLVLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LGLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESVAEKLSKLADGEKTTTEELLVLLE
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA1 EGTWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSISYLRECAKANDWLQFIIHSQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EGTWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSISYLRECAKANDWLQFIIHSQL
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA1 HNYHPAEVKSLIQYFSPVIQDHLRLAFENLPSVPTSKMDSDQVCNKCPQELQGSKQEMTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 HNYHPAEVKSLIQYFSPVIQDHLRLAFENLPSVPTSKMDSDQVCNKCPQELQGSKQEMTD
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA1 LFEILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSVEDNVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LFEILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSVEDNVAT
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA1 EAMGHIQDSTEDHTWNLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVMEMYELCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EAMGHIQDSTEDHTWNLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVMEMYELCM
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA1 FFRNYKEAEAKLLEFQKSLETLNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTQYELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 FFRNYKEAEAKLLEFQKSLETLNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTQYELG
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA1 KLLQLFVEREHLFSDGPDVKKLCILCQILKDTSIAINHTIITSYSIENLQHECRSILERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KLLQLFVEREHLFSDGPDVKKLCILCQILKDTSIAINHTIITSYSIENLQHECRSILERL
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA1 QTDGQFALARRVAELAELPVDNLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 QTDGQFALARRVAELAELPVDNLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKK
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA1 NSISSKAASSFFSTQAHVACEHPTGWSSMEERHLLLTLAGHWLAQEDVVPLDKLEELEKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NSISSKAASSFFSTQAHVACEHPTGWSSMEERHLLLTLAGHWLAQEDVVPLDKLEELEKQ
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA1 IWLCRITQHTLGRNQEETEPRFSRQISTSGELSFDSLASEFSFSKLAALNTSKYLELNSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 IWLCRITQHTLGRNQEETEPRFSRQISTSGELSFDSLASEFSFSKLAALNTSKYLELNSL
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KA1 PSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNPDVALVLHCRALASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNPDVALVLHCRALASG
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KA1 EASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSTSSLDSQKFVTVPSSNEVVTNLEVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSTSSLDSQKFVTVPSSNEVVTNLEVL
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KA1 TSKCLHGKNYCRQVLCLYDLAKELGCSYTDVAAQDGEAMLRKILASQQPDRCKRAQAFIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TSKCLHGKNYCRQVLCLYDLAKELGCSYTDVAAQDGEAMLRKILASQQPDRCKRAQAFIS
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KA1 TQGLKPDTVAELVAEEVTRELLTSSQGTGHKQMFNPTEESQTFLQLTTLCQDRTLVGMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TQGLKPDTVAELVAEEVTRELLTSSQGTGHKQMFNPTEESQTFLQLTTLCQDRTLVGMKL
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KA1 LDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAHMLTDNHLAPSEEYGLVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAHMLTDNHLAPSEEYGLVV
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KA1 RLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNM
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260 2270 2280
pF1KA1 IALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 IALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYA
2230 2240 2250 2260 2270 2280
2290 2300 2310 2320 2330 2340
pF1KA1 KDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLGRHKLMDCILALPRFYQASIVAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLGRHKLMDCILALPRFYQASIVAEA
2290 2300 2310 2320 2330 2340
2350 2360 2370 2380 2390 2400
pF1KA1 YDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMVMENLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 YDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMVMENLKK
2350 2360 2370 2380 2390 2400
2410 2420 2430 2440
pF1KA1 LLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG
:::::::::::::::::::::::::::::::::::::::::::
CCDS10 LLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG
2410 2420 2430 2440
>>CCDS53939.1 SPG11 gene_id:80208|Hs109|chr15 (2330 aa)
initn: 15535 init1: 13051 opt: 13051 Z-score: 15508.6 bits: 2883.6 E(33420): 0
Smith-Waterman score: 15312; 95.3% identity (95.3% similar) in 2443 aa overlap (1-2443:1-2330)
10 20 30 40 50 60
pF1KA1 MAAEEGVASAASAGGSWGTAAMGRVLPMLLVPVPAEAMGQLGSRAQLRTQPEALGSLTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAAEEGVASAASAGGSWGTAAMGRVLPMLLVPVPAEAMGQLGSRAQLRTQPEALGSLTAA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 GSLQVLSLTPGSRGGGRCCLEGPFWHFLWEDSRNSSTPTEKPKLLALGENYELLIYEFNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GSLQVLSLTPGSRGGGRCCLEGPFWHFLWEDSRNSSTPTEKPKLLALGENYELLIYEFNL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 KDGRCDATILYSCSREALQKLIDDQDISISLLSLRILSFHNNTSLLFINKCVILHIIFPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KDGRCDATILYSCSREALQKLIDDQDISISLLSLRILSFHNNTSLLFINKCVILHIIFPE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RDAAIRVLNCFTLPLPAQAVDMIIDTQLCRGILFVLSSLGWIYIFDVVDGTYVAHVDLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RDAAIRVLNCFTLPLPAQAVDMIIDTQLCRGILFVLSSLGWIYIFDVVDGTYVAHVDLAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HKEDMCNEQQQEPAKISSFTSLKVSQDLDVAVIVSSSNSAVALNLNLYFRQHPGHLLCER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 HKEDMCNEQQQEPAKISSFTSLKVSQDLDVAVIVSSSNSAVALNLNLYFRQHPGHLLCER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 ILEDLPIQGPKGVDEDDPVNSAYNMKLAKFSFQIDRSWKAQLSSLNETIKNSKLEVSCCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ILEDLPIQGPKGVDEDDPVNSAYNMKLAKFSFQIDRSWKAQLSSLNETIKNSKLEVSCCA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 PWFQDILHLESPESGNHSTSVQSWAFIPQDIMHGQYNVLQKDHAKTSDPGRSWKIMHISE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PWFQDILHLESPESGNHSTSVQSWAFIPQDIMHGQYNVLQKDHAKTSDPGRSWKIMHISE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 QEEPIELKCVSVTGFTALFTWEVERMGYTITLWDLETQGMQCSSLGTKCIPVDSSGDQQL
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
CCDS53 QEEPIELKCVSVTGFTALFTWEVERMGYTITLWDLETQGMQCFSLGTKCIPVDSSGDQQL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 CFVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNGWGRCSIPIHALEAGIENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 CFVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNGWGRCSIPIHALEAGIENR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 QLDTVNFFLKSKENLFNPSSKSSVSDQFDHLSSHLYLRNVEELIPALDLLCSAIRESYSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QLDTVNFFLKSKENLFNPSSKSSVSDQFDHLSSHLYLRNVEELIPALDLLCSAIRESYSE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 PQSKHFSEQLLNLTLSFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PQSKHFSEQLLNLTLSFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 LTDAIDEYDVHENVPKVKESNIWKKLSFEEVIASAILNNKIPEAQTFFRIDSHSAQKLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LTDAIDEYDVHENVPKVKESNIWKKLSFEEVIASAILNNKIPEAQTFFRIDSHSAQKLEE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 LIGIGLNLVFDNLKKNNIKEASELLKNMGFDVKGQLLKICFYTTNKNIRDFLVEILKEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LIGIGLNLVFDNLKKNNIKEASELLKNMGFDVKGQLLKICFYTTNKNIRDFLVEILKEKN
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 YFSEKEKRTIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 YFSEKEKRTIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKD
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 EFNKQDHRIVLNWALWWDQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWLNIILWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EFNKQDHRIVLNWALWWDQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWLNIILWI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 GEFQTQHSYASLQQNKWPLLTVDVINQNTSCNNYMRNEILDKLARNGVFLASELEDFECF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GEFQTQHSYASLQQNKWPLLTVDVINQNTSCNNYMRNEILDKLARNGVFLASELEDFECF
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 LLRLSRIGGVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLSPENCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LLRLSRIGGVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLSPENCP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 FLEKKELHEAHPWFEFLVQCRQVASNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FLEKKELHEAHPWFEFLVQCRQVASNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGH
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 TLLALATTMYSPGGVSQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTPPSVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TLLALATTMYSPGGVSQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTPPSVL
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 PSDITIYHLIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PSDITIYHLIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFA
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 YYLHNGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVIGLSSFHIPSIGAACVCFLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 YYLHNGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVIGLSSFHIPSIGAACVCFLEL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 LGLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESVAEKLSKLADGEKTTTEELLVLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LGLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESVAEKLSKLADGEKTTTEELLVLLE
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA1 EGTWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSISYLRECAKANDWLQFIIHSQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EGTWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSISYLRECAKANDWLQFIIHSQL
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA1 HNYHPAEVKSLIQYFSPVIQDHLRLAFENLPSVPTSKMDSDQVCNKCPQELQGSKQEMTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 HNYHPAEVKSLIQYFSPVIQDHLRLAFENLPSVPTSKMDSDQVCNKCPQELQGSKQEMTD
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA1 LFEILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSVEDNVAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LFEILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSVEDNVAT
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA1 EAMGHIQDSTEDHTWNLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVMEMYELCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EAMGHIQDSTEDHTWNLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVMEMYELCM
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA1 FFRNYKEAEAKLLEFQKSLETLNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTQYELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 FFRNYKEAEAKLLEFQKSLETLNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTQYELG
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA1 KLLQLFVEREHLFSDGPDVKKLCILCQILKDTSIAINHTIITSYSIENLQHECRSILERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KLLQLFVEREHLFSDGPDVKKLCILCQILKDTSIAINHTIITSYSIENLQHECRSILERL
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA1 QTDGQFALARRVAELAELPVDNLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QTDGQFALARRVAELAELPVDNLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKK
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA1 NSISSKAASSFFSTQAHVACEHPTGWSSMEERHLLLTLAGHWLAQEDVVPLDKLEELEKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 NSISSKAASSFFSTQAHVACEHPTGWSSMEERHLLLTLAGHWLAQEDVVPLDKLEELEKQ
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA1 IWLCRITQHTLGRNQEETEPRFSRQISTSGELSFDSLASEFSFSKLAALNTSKYLELNSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IWLCRITQHTLGRNQEETEPRFSRQISTSGELSFDSLASEFSFSKLAALNTSKYLELNSL
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KA1 PSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNPDVALVLHCRALASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNPDVALVLHCRALASG
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KA1 EASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSTSSLDSQKFVTVPSSNEVVTNLEVL
:::::::::::::::::::::::::::::::::::
CCDS53 EASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSR------------------------
1930 1940 1950
1990 2000 2010 2020 2030 2040
pF1KA1 TSKCLHGKNYCRQVLCLYDLAKELGCSYTDVAAQDGEAMLRKILASQQPDRCKRAQAFIS
CCDS53 ------------------------------------------------------------
2050 2060 2070 2080 2090 2100
pF1KA1 TQGLKPDTVAELVAEEVTRELLTSSQGTGHKQMFNPTEESQTFLQLTTLCQDRTLVGMKL
:::::::::::::::::::::::::::::::
CCDS53 -----------------------------HKQMFNPTEESQTFLQLTTLCQDRTLVGMKL
1960 1970 1980
2110 2120 2130 2140 2150 2160
pF1KA1 LDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAHMLTDNHLAPSEEYGLVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAHMLTDNHLAPSEEYGLVV
1990 2000 2010 2020 2030 2040
2170 2180 2190 2200 2210 2220
pF1KA1 RLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNM
2050 2060 2070 2080 2090 2100
2230 2240 2250 2260 2270 2280
pF1KA1 IALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYA
2110 2120 2130 2140 2150 2160
2290 2300 2310 2320 2330 2340
pF1KA1 KDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLGRHKLMDCILALPRFYQASIVAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 KDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLGRHKLMDCILALPRFYQASIVAEA
2170 2180 2190 2200 2210 2220
2350 2360 2370 2380 2390 2400
pF1KA1 YDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMVMENLKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 YDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMVMENLKK
2230 2240 2250 2260 2270 2280
2410 2420 2430 2440
pF1KA1 LLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG
:::::::::::::::::::::::::::::::::::::::::::
CCDS53 LLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG
2290 2300 2310 2320 2330
2443 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Jul 14 21:20:34 2018 done: Sat Jul 14 21:20:35 2018
Total Scan time: 3.470 Total Display time: 0.280
Function used was FASTA [36.3.4 Apr, 2011]