Result of FASTA (omim) for
pF1KB0045
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0045, 1433 aa
1>>>pF1KB0045 1433 - 1433 aa - 1433 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.9244+/-0.00049; mu= -8.2436+/- 0.030
mean_var=369.0983+/-77.376, 0's: 0 Z-trim(118.4): 100 B-trim: 0 in 0/57
Lambda= 0.066758
statistics sampled from 31140 (31245) to 31140 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.366), width: 16
Scan time: 19.800
The best scores are: opt bits E(85289)
NP_001265139 (OMIM: 603948) nuclear pore complex p (1433) 9365 917.7 0
XP_005249564 (OMIM: 603948) PREDICTED: nuclear por (1457) 5698 564.5 2.1e-159
NP_005115 (OMIM: 603948) nuclear pore complex prot (1475) 5698 564.5 2.1e-159
NP_001265138 (OMIM: 603948) nuclear pore complex p (1506) 5698 564.5 2.2e-159
XP_016867083 (OMIM: 603948) PREDICTED: nuclear por (1451) 5696 564.3 2.4e-159
XP_006715353 (OMIM: 603948) PREDICTED: nuclear por (1469) 5692 563.9 3.2e-159
XP_011513330 (OMIM: 603948) PREDICTED: nuclear por (1410) 4274 427.3 4e-118
XP_006715354 (OMIM: 603948) PREDICTED: nuclear por ( 839) 3752 376.9 3.6e-103
XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 S (3199) 541 68.0 1.3e-09
XP_016860112 (OMIM: 601181,608033) PREDICTED: E3 S (2807) 538 67.7 1.4e-09
NP_006258 (OMIM: 601181,608033) E3 SUMO-protein li (3224) 538 67.8 1.6e-09
XP_005264062 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 538 67.8 1.6e-09
XP_005264061 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 538 67.8 1.6e-09
XP_005264060 (OMIM: 601181,608033) PREDICTED: E3 S (3250) 538 67.8 1.6e-09
XP_011509877 (OMIM: 601181,608033) PREDICTED: E3 S (3257) 538 67.8 1.6e-09
XP_005264059 (OMIM: 601181,608033) PREDICTED: E3 S (3258) 538 67.8 1.6e-09
XP_011514552 (OMIM: 158371) PREDICTED: mucin-3A is (3076) 456 59.8 3.6e-07
NP_005951 (OMIM: 158371) mucin-3A precursor [Homo (3323) 455 59.8 4.1e-07
XP_011514549 (OMIM: 158371) PREDICTED: mucin-3A is (3296) 444 58.7 8.6e-07
XP_011514551 (OMIM: 158371) PREDICTED: mucin-3A is (3245) 437 58.0 1.4e-06
XP_016867720 (OMIM: 158371) PREDICTED: mucin-3A is (3143) 435 57.8 1.5e-06
XP_011514548 (OMIM: 158371) PREDICTED: mucin-3A is (3313) 429 57.3 2.3e-06
NP_001035194 (OMIM: 608424) mucin-17 precursor [Ho (4493) 369 51.6 0.00016
NP_001291288 (OMIM: 158373) mucin-5AC precursor [H (5654) 356 50.4 0.00047
NP_001305254 (OMIM: 114350,613065) nuclear pore co ( 916) 304 44.8 0.0035
XP_005272275 (OMIM: 114350,613065) PREDICTED: nucl (2083) 311 45.8 0.0043
XP_005272276 (OMIM: 114350,613065) PREDICTED: nucl (2036) 304 45.1 0.0067
NP_001305253 (OMIM: 114350,613065) nuclear pore co (2080) 304 45.1 0.0068
NP_005076 (OMIM: 114350,613065) nuclear pore compl (2090) 304 45.1 0.0068
XP_016870656 (OMIM: 114350,613065) PREDICTED: nucl (2119) 304 45.1 0.0069
XP_011517355 (OMIM: 114350,613065) PREDICTED: nucl (2120) 304 45.1 0.0069
XP_006717355 (OMIM: 114350,613065) PREDICTED: nucl (2120) 304 45.1 0.0069
XP_005272273 (OMIM: 114350,613065) PREDICTED: nucl (2132) 304 45.1 0.0069
>>NP_001265139 (OMIM: 603948) nuclear pore complex prote (1433 aa)
initn: 9365 init1: 9365 opt: 9365 Z-score: 4891.6 bits: 917.7 E(85289): 0
Smith-Waterman score: 9365; 100.0% identity (100.0% similar) in 1433 aa overlap (1-1433:1-1433)
10 20 30 40 50 60
pF1KB0 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSGFASPKIDSVAAQPTATSPVVYTRPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSGFASPKIDSVAAQPTATSPVVYTRPAI
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 SSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 SGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 VSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPG
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 SSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 SGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGS
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 INPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGV
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 SNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAP
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB0 FTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB0 DNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTAD
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB0 QGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGN
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KB0 TAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGS
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KB0 SFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTF
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KB0 GTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSS
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430
pF1KB0 TPAASAQPSGSGGFPFNQSPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPAASAQPSGSGGFPFNQSPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
1390 1400 1410 1420 1430
>>XP_005249564 (OMIM: 603948) PREDICTED: nuclear pore co (1457 aa)
initn: 7843 init1: 5632 opt: 5698 Z-score: 2982.8 bits: 564.5 E(85289): 2.1e-159
Smith-Waterman score: 9106; 95.9% identity (95.9% similar) in 1475 aa overlap (1-1433:1-1457)
10 20 30 40 50 60
pF1KB0 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
:::::::::::::::::::::::::::::::::::::: ::::
XP_005 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNS------------------VDSQ
310 320 330 340
370 380 390 400 410 420
pF1KB0 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB0 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB0 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
470 480 490 500 510 520
550 560 570
pF1KB0 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSS---------------------------
:::::::::::::::::::::::::::::::::
XP_005 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRPA
530 540 550 560 570 580
580 590 600 610
pF1KB0 ---------------GFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGS
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 EILKEGSVLDILKSPGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGS
590 600 610 620 630 640
620 630 640 650 660 670
pF1KB0 SWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFK
650 660 670 680 690 700
680 690 700 710 720 730
pF1KB0 PVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVT
710 720 730 740 750 760
740 750 760 770 780 790
pF1KB0 TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSG
770 780 790 800 810 820
800 810 820 830 840 850
pF1KB0 GSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAAS
830 840 850 860 870 880
860 870 880 890 900 910
pF1KB0 SSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFK
890 900 910 920 930 940
920 930 940 950 960 970
pF1KB0 FGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSA
950 960 970 980 990 1000
980 990 1000 1010 1020 1030
pF1KB0 GFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKG
1010 1020 1030 1040 1050 1060
1040 1050 1060 1070 1080 1090
pF1KB0 GFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQ
1070 1080 1090 1100 1110 1120
1100 1110 1120 1130 1140 1150
pF1KB0 TKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSS
1130 1140 1150 1160 1170 1180
1160 1170 1180 1190 1200 1210
pF1KB0 STPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKL
1190 1200 1210 1220 1230 1240
1220 1230 1240 1250 1260 1270
pF1KB0 ATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFG
1250 1260 1270 1280 1290 1300
1280 1290 1300 1310 1320 1330
pF1KB0 ANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQ
1310 1320 1330 1340 1350 1360
1340 1350 1360 1370 1380 1390
pF1KB0 SAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQ
1370 1380 1390 1400 1410 1420
1400 1410 1420 1430
pF1KB0 SPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
:::::::::::::::::::::::::::::::::::
XP_005 SPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
1430 1440 1450
>>NP_005115 (OMIM: 603948) nuclear pore complex protein (1475 aa)
initn: 5632 init1: 5632 opt: 5698 Z-score: 2982.7 bits: 564.5 E(85289): 2.1e-159
Smith-Waterman score: 9204; 97.1% identity (97.1% similar) in 1465 aa overlap (11-1433:11-1475)
10 20 30 40 50 60
pF1KB0 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
490 500 510 520 530 540
550 560 570
pF1KB0 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSS---------------------------
:::::::::::::::::::::::::::::::::
NP_005 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRPA
550 560 570 580 590 600
580 590 600 610
pF1KB0 ---------------GFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGS
:::::::::::::::::::::::::::::::::::::::::::::
NP_005 EILKEGSVLDILKSPGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGS
610 620 630 640 650 660
620 630 640 650 660 670
pF1KB0 SWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFK
670 680 690 700 710 720
680 690 700 710 720 730
pF1KB0 PVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVT
730 740 750 760 770 780
740 750 760 770 780 790
pF1KB0 TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSG
790 800 810 820 830 840
800 810 820 830 840 850
pF1KB0 GSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAAS
850 860 870 880 890 900
860 870 880 890 900 910
pF1KB0 SSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFK
910 920 930 940 950 960
920 930 940 950 960 970
pF1KB0 FGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSA
970 980 990 1000 1010 1020
980 990 1000 1010 1020 1030
pF1KB0 GFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKG
1030 1040 1050 1060 1070 1080
1040 1050 1060 1070 1080 1090
pF1KB0 GFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQ
1090 1100 1110 1120 1130 1140
1100 1110 1120 1130 1140 1150
pF1KB0 TKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSS
1150 1160 1170 1180 1190 1200
1160 1170 1180 1190 1200 1210
pF1KB0 STPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 STPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKL
1210 1220 1230 1240 1250 1260
1220 1230 1240 1250 1260 1270
pF1KB0 ATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFG
1270 1280 1290 1300 1310 1320
1280 1290 1300 1310 1320 1330
pF1KB0 ANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQ
1330 1340 1350 1360 1370 1380
1340 1350 1360 1370 1380 1390
pF1KB0 SAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 SAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQ
1390 1400 1410 1420 1430 1440
1400 1410 1420 1430
pF1KB0 SPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
:::::::::::::::::::::::::::::::::::
NP_005 SPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
1450 1460 1470
>>NP_001265138 (OMIM: 603948) nuclear pore complex prote (1506 aa)
initn: 8721 init1: 5632 opt: 5698 Z-score: 2982.6 bits: 564.5 E(85289): 2.2e-159
Smith-Waterman score: 8903; 95.0% identity (95.0% similar) in 1465 aa overlap (42-1433:42-1506)
20 30 40 50 60 70
pF1KB0 GGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFNKNEDVCSCSTD
::::::::::::::::::::::::::::::
NP_001 GGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFNKNEDVCSCSTD
20 30 40 50 60 70
80 90 100 110 120 130
pF1KB0 TSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTASNYPDVLTRPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTASNYPDVLTRPSL
80 90 100 110 120 130
140 150 160 170 180 190
pF1KB0 HRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDNISTTSGFSSRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDNISTTSGFSSRA
140 150 160 170 180 190
200 210 220 230 240 250
pF1KB0 SDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLSPSLGNSSILKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLSPSLGNSSILKT
200 210 220 230 240 250
260 270 280 290 300 310
pF1KB0 SQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQSYGVTSSTARRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQSYGVTSSTARRI
260 270 280 290 300 310
320 330 340 350 360 370
pF1KB0 LQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQYPPVQRLMTPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQYPPVQRLMTPK
320 330 340 350 360 370
380 390 400 410 420 430
pF1KB0 PVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQRESGFSYPNFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQRESGFSYPNFS
380 390 400 410 420 430
440 450 460
pF1KB0 LPAANGLSSGVGGGGGKMRRERTRFVASKPLEEE--------------------------
::::::::::::::::::::::::::::::::::
NP_001 LPAANGLSSGVGGGGGKMRRERTRFVASKPLEEERQGLTVLPKLISSSCAQAIIPSWPLK
440 450 460 470 480 490
470 480 490 500 510 520
pF1KB0 -----EMEVPVLPKISLPITSSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSST
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLRLQEMEVPVLPKISLPITSSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSST
500 510 520 530 540 550
530 540 550 560 570
pF1KB0 GSPMFKFSSPIVKSTEANVLPPSSIGFTFSVPVAKTAELSGSSSTLEPIISSS-------
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSPMFKFSSPIVKSTEANVLPPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHHVTTV
560 570 580 590 600 610
580 590
pF1KB0 -----------------------------------GFASPKIDSVAAQPTATSPVVYTRP
:::::::::::::::::::::::::
NP_001 NSTNCKKTPPEDCEGPFRPAEILKEGSVLDILKSPGFASPKIDSVAAQPTATSPVVYTRP
620 630 640 650 660 670
600 610 620 630 640 650
pF1KB0 AISSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AISSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETP
680 690 700 710 720 730
660 670 680 690 700 710
pF1KB0 NKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTL
740 750 760 770 780 790
720 730 740 750 760 770
pF1KB0 TVVSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVVSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEK
800 810 820 830 840 850
780 790 800 810 820 830
pF1KB0 PGSSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGSSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPG
860 870 880 890 900 910
840 850 860 870 880 890
pF1KB0 TKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDS
920 930 940 950 960 970
900 910 920 930 940 950
pF1KB0 GSINPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSINPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQF
980 990 1000 1010 1020 1030
960 970 980 990 1000 1010
pF1KB0 GVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASV
1040 1050 1060 1070 1080 1090
1020 1030 1040 1050 1060 1070
pF1KB0 APFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGK
1100 1110 1120 1130 1140 1150
1080 1090 1100 1110 1120 1130
pF1KB0 KADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTT
1160 1170 1180 1190 1200 1210
1140 1150 1160 1170 1180 1190
pF1KB0 ADQGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADQGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAF
1220 1230 1240 1250 1260 1270
1200 1210 1220 1230 1240 1250
pF1KB0 GNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSA
1280 1290 1300 1310 1320 1330
1260 1270 1280 1290 1300 1310
pF1KB0 GSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPP
1340 1350 1360 1370 1380 1390
1320 1330 1340 1350 1360 1370
pF1KB0 TFGTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFGTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGAN
1400 1410 1420 1430 1440 1450
1380 1390 1400 1410 1420 1430
pF1KB0 SSTPAASAQPSGSGGFPFNQSPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSTPAASAQPSGSGGFPFNQSPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
1460 1470 1480 1490 1500
>>XP_016867083 (OMIM: 603948) PREDICTED: nuclear pore co (1451 aa)
initn: 7843 init1: 5632 opt: 5696 Z-score: 2981.8 bits: 564.3 E(85289): 2.4e-159
Smith-Waterman score: 9118; 96.3% identity (96.3% similar) in 1469 aa overlap (1-1433:1-1451)
10 20 30 40 50 60
pF1KB0 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
:::::::::::::::::::::::::::::::::::::: ::::
XP_016 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNS------------------VDSQ
310 320 330 340
370 380 390 400 410 420
pF1KB0 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB0 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB0 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
470 480 490 500 510 520
550 560 570
pF1KB0 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSS---------------------------
:::::::::::::::::::::::::::::::::
XP_016 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSVNSTNCKKTPPEDCEGPFRPAEILKEG
530 540 550 560 570 580
580 590 600 610 620
pF1KB0 ---------GFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGSSWQCDT
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVLDILKSPGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGSSWQCDT
590 600 610 620 630 640
630 640 650 660 670 680
pF1KB0 CLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPVIGTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPVIGTW
650 660 670 680 690 700
690 700 710 720 730 740
pF1KB0 DCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVTTGTLGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVTTGTLGF
710 720 730 740 750 760
750 760 770 780 790 800
pF1KB0 GDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLE
770 780 790 800 810 820
810 820 830 840 850 860
pF1KB0 KFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFG
830 840 850 860 870 880
870 880 890 900 910 920
pF1KB0 VSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSE
890 900 910 920 930 940
930 940 950 960 970 980
pF1KB0 SKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGT
950 960 970 980 990 1000
990 1000 1010 1020 1030 1040
pF1KB0 GVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGN
1010 1020 1030 1040 1050 1060
1050 1060 1070 1080 1090 1100
pF1KB0 VEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENS
1070 1080 1090 1100 1110 1120
1110 1120 1130 1140 1150 1160
pF1KB0 SKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATS
1130 1140 1150 1160 1170 1180
1170 1180 1190 1200 1210 1220
pF1KB0 AGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSST
1190 1200 1210 1220 1230 1240
1230 1240 1250 1260 1270 1280
pF1KB0 GTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPT
1250 1260 1270 1280 1290 1300
1290 1300 1310 1320 1330 1340
pF1KB0 FGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFGSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFGSG
1310 1320 1330 1340 1350 1360
1350 1360 1370 1380 1390 1400
pF1KB0 TTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQSPAAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQSPAAFT
1370 1380 1390 1400 1410 1420
1410 1420 1430
pF1KB0 VGSNGKNVFSSSGTSFSGRKIKTAVRRRK
:::::::::::::::::::::::::::::
XP_016 VGSNGKNVFSSSGTSFSGRKIKTAVRRRK
1430 1440 1450
>>XP_006715353 (OMIM: 603948) PREDICTED: nuclear pore co (1469 aa)
initn: 5632 init1: 5632 opt: 5692 Z-score: 2979.6 bits: 563.9 E(85289): 3.2e-159
Smith-Waterman score: 9258; 97.5% identity (97.5% similar) in 1465 aa overlap (5-1433:5-1469)
10 20 30 40 50 60
pF1KB0 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
490 500 510 520 530 540
550 560 570
pF1KB0 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSS---------------------------
:::::::::::::::::::::::::::::::::
XP_006 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSVNSTNCKKTPPEDCEGPFRPAEILKEG
550 560 570 580 590 600
580 590 600 610 620
pF1KB0 ---------GFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGSSWQCDT
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SVLDILKSPGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGSSWQCDT
610 620 630 640 650 660
630 640 650 660 670 680
pF1KB0 CLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPVIGTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFKPVIGTW
670 680 690 700 710 720
690 700 710 720 730 740
pF1KB0 DCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVTTGTLGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVTTGTLGF
730 740 750 760 770 780
750 760 770 780 790 800
pF1KB0 GDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLE
790 800 810 820 830 840
810 820 830 840 850 860
pF1KB0 KFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFG
850 860 870 880 890 900
870 880 890 900 910 920
pF1KB0 VSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSE
910 920 930 940 950 960
930 940 950 960 970 980
pF1KB0 SKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGT
970 980 990 1000 1010 1020
990 1000 1010 1020 1030 1040
pF1KB0 GVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGN
1030 1040 1050 1060 1070 1080
1050 1060 1070 1080 1090 1100
pF1KB0 VEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENS
1090 1100 1110 1120 1130 1140
1110 1120 1130 1140 1150 1160
pF1KB0 SKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATS
1150 1160 1170 1180 1190 1200
1170 1180 1190 1200 1210 1220
pF1KB0 AGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSST
1210 1220 1230 1240 1250 1260
1230 1240 1250 1260 1270 1280
pF1KB0 GTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPT
1270 1280 1290 1300 1310 1320
1290 1300 1310 1320 1330 1340
pF1KB0 FGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFGSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFGSG
1330 1340 1350 1360 1370 1380
1350 1360 1370 1380 1390 1400
pF1KB0 TTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQSPAAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQSPAAFT
1390 1400 1410 1420 1430 1440
1410 1420 1430
pF1KB0 VGSNGKNVFSSSGTSFSGRKIKTAVRRRK
:::::::::::::::::::::::::::::
XP_006 VGSNGKNVFSSSGTSFSGRKIKTAVRRRK
1450 1460
>>XP_011513330 (OMIM: 603948) PREDICTED: nuclear pore co (1410 aa)
initn: 7694 init1: 3776 opt: 4274 Z-score: 2241.8 bits: 427.3 E(85289): 4e-118
Smith-Waterman score: 8690; 92.7% identity (92.7% similar) in 1475 aa overlap (1-1433:1-1410)
10 20 30 40 50 60
pF1KB0 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
490 500 510 520 530 540
550 560 570
pF1KB0 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSS---------------------------
:::::::::::::::::::::::::::::::::
XP_011 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRPA
550 560 570 580 590 600
580 590 600 610
pF1KB0 ---------------GFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGS
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 EILKEGSVLDILKSPGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGS
610 620 630 640 650 660
620 630 640 650 660 670
pF1KB0 SWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFK
670 680 690 700 710 720
680 690 700 710 720 730
pF1KB0 PVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVT
730 740 750 760 770 780
740 750 760 770 780 790
pF1KB0 TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSG
::::::::::::::::::::::::::::::::::::::::::
XP_011 TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPG------------------
790 800 810 820
800 810 820 830 840 850
pF1KB0 GSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAAS
:::::::::::::
XP_011 -----------------------------------------------FDTSSSSSNSAAS
830
860 870 880 890 900 910
pF1KB0 SSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFK
840 850 860 870 880 890
920 930 940 950 960 970
pF1KB0 FGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSA
900 910 920 930 940 950
980 990 1000 1010 1020 1030
pF1KB0 GFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKG
960 970 980 990 1000 1010
1040 1050 1060 1070 1080 1090
pF1KB0 GFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFSFGNVEPASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQ
1020 1030 1040 1050 1060 1070
1100 1110 1120 1130 1140 1150
pF1KB0 TKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSS
1080 1090 1100 1110 1120 1130
1160 1170 1180 1190 1200 1210
pF1KB0 STPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKL
1140 1150 1160 1170 1180 1190
1220 1230 1240 1250 1260 1270
pF1KB0 ATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFG
1200 1210 1220 1230 1240 1250
1280 1290 1300 1310 1320 1330
pF1KB0 ANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQ
1260 1270 1280 1290 1300 1310
1340 1350 1360 1370 1380 1390
pF1KB0 SAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAFGSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQ
1320 1330 1340 1350 1360 1370
1400 1410 1420 1430
pF1KB0 SPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
:::::::::::::::::::::::::::::::::::
XP_011 SPAAFTVGSNGKNVFSSSGTSFSGRKIKTAVRRRK
1380 1390 1400 1410
>>XP_006715354 (OMIM: 603948) PREDICTED: nuclear pore co (839 aa)
initn: 4164 init1: 3744 opt: 3752 Z-score: 1973.3 bits: 376.9 E(85289): 3.6e-103
Smith-Waterman score: 5062; 94.9% identity (94.9% similar) in 822 aa overlap (1-780:1-822)
10 20 30 40 50 60
pF1KB0 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTESVKNIVPGWLQRYFN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPEPAVSNTEEPSTTSTAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDDN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHTATSSKKPAFNLSAFGTLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNTPYQAPVRRQMKAKQLSAQS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPLDRSGIDITDFQAKREKVDSQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQRIDNKCSTGYEKNMTPGQNREQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVASKPLEEEEMEVPVLPKISLPIT
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVL
490 500 510 520 530 540
550 560 570
pF1KB0 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSS---------------------------
:::::::::::::::::::::::::::::::::
XP_006 PPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRPA
550 560 570 580 590 600
580 590 600 610
pF1KB0 ---------------GFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGS
:::::::::::::::::::::::::::::::::::::::::::::
XP_006 EILKEGSVLDILKSPGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGS
610 620 630 640 650 660
620 630 640 650 660 670
pF1KB0 SWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPNKSGKTTLSASGTGFGDKFK
670 680 690 700 710 720
680 690 700 710 720 730
pF1KB0 PVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCTVT
730 740 750 760 770 780
740 750 760 770 780 790
pF1KB0 TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVSLPSG
::::::::::::::::::::::::::::::::::::::::::
XP_006 TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGCHLVMVPLCFYFPPLRP
790 800 810 820 830
800 810 820 830 840 850
pF1KB0 GSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKGFDTSSSSSNSAAS
>>XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 SUMO- (3199 aa)
initn: 746 init1: 197 opt: 541 Z-score: 293.6 bits: 68.0 E(85289): 1.3e-09
Smith-Waterman score: 665; 32.4% identity (58.6% similar) in 488 aa overlap (597-1041:1466-1913)
570 580 590 600 610 620
pF1KB0 EPIISSSGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGIGFGESLKAGSSWQCDTCL
.: :.: : : : : :. :.:..::
XP_011 IACQNTKSANKSGSSFVHQASFKFGQGDLPKPINSDFRSV---F--STKEGQ-WDCSACL
1440 1450 1460 1470 1480
630 640 650 660 670 680
pF1KB0 LQNKVTDNKCIACQAAKLSPR-DTAKQTGIETPN--KSGKTTLSAS-GTGFGDKFKPVIG
.::. ...:: ::: .:: .. :.: :: : : . : . .:: : : :
XP_011 VQNEGSSTKCAACQ----NPRKQSLPATSIPTPASFKFGTSETSKTLKSGFEDMFAKKEG
1490 1500 1510 1520 1530 1540
690 700 710 720 730 740
pF1KB0 TWDCDTCLVQNKPEAIKCVACETP-KPGTCVKRALTLTVVSESAETMTASSSSCTVTTGT
:::..:::.:. .: .::::..: ::. .. . ..:: : .:
XP_011 QWDCSSCLVRNEANATRCVACQNPDKPSPSTSVPAPASFKFGTSETSKAPKS--------
1550 1560 1570 1580 1590
750 760 770 780 790
pF1KB0 LGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVS-----LP
:: : . :.:.:::: : :.: .::..: ..::.. ..:. ..:.: :
XP_011 -GFEGMFTKKEGQWDCSVCLVRNEASATKCIAC--QNPGKQNQTTSAVSTPASSETSKAP
1600 1610 1620 1630 1640 1650
800 810 820 830
pF1KB0 SGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACES----------AKPGT-------
..: :. : : ::.::: .:::.:.:..:::.::. . :..
XP_011 KSGFEGM--FTKKEGQWDCSVCLVRNEASATKCIACQCPSKQNQTTAISTPASSEISKAP
1660 1670 1680 1690 1700 1710
840 850 860 870 880
pF1KB0 KSGFKG-------FDTSSSSSNSAASSSFKFGVSSSSSGPSQ--------TLTSTGNFKF
::::.: .: : .. :::.: :. ..: :.. ..: ...:.
XP_011 KSGFEGMFIRKGQWDCSVCCVQNE-SSSLKC-VACDASKPTHKPIAEAPSAFTLGSEMKL
1720 1730 1740 1750 1760 1770
890 900 910 920 930 940
pF1KB0 GDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFKFG-VSSESKPEEVKKDSKNDNFKFGL
:..: ..:.. : : .. ::.. :::: :..:..: . . :.: .:: .
XP_011 HDSSGSQVGTGFKS---NFSEKASKFGNTEQGFKFGHVDQENSPSFMFQGSSNTEFK-ST
1780 1790 1800 1810 1820
950 960 970 980 990 1000
pF1KB0 SSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENK
. :.: ::: :.::.:. :..::: : : ...::. . . : . .. ....
XP_011 KEGFSIPVSADGFKFGISEPGNQEKKSEKPLENGTGFQ-AQDI--SGQKNGRGVIFGQTS
1830 1840 1850 1860 1870 1880
1010 1020 1030 1040 1050 1060
pF1KB0 SSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEE
:.:... . .::.: : .::. : :: ::
XP_011 STFTFADL-AKSTSGEGFQF----GKKD--PNFKG-FSGAGEKLFSSQYGKMANKANTSG
1890 1900 1910 1920 1930
1070 1080 1090 1100 1110 1120
pF1KB0 KQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQ
XP_011 DFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVSQWKE
1940 1950 1960 1970 1980 1990
>>XP_016860112 (OMIM: 601181,608033) PREDICTED: E3 SUMO- (2807 aa)
initn: 772 init1: 197 opt: 538 Z-score: 292.9 bits: 67.7 E(85289): 1.4e-09
Smith-Waterman score: 672; 26.4% identity (54.7% similar) in 793 aa overlap (310-1041:1231-1972)
280 290 300 310 320 330
pF1KB0 NTPYQAPVRRQMKAKQLSAQSYGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSP
:.:. :.. . :. :.. .: :.
XP_016 LFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTP-NAG
1210 1220 1230 1240 1250
340 350 360 370 380 390
pF1KB0 LDRS----GIDITDFQAKREKVDSQYPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRK
::: ..: .: : :.. . :. ::. ... . . : :
XP_016 SDRSFVWHALDYADELPKPEQL------AIRFKTPEEAALFKCKFEEAQSILKAPG----
1260 1270 1280 1290 1300
400 410 420 430 440 450
pF1KB0 TNQRIDNKCSTGYEKNMTPGQNREQRESGFSYPNFSLPAANGLSSGVGGGGGKMRRERT-
:: . .. .. :. : .:.. .: . :: . .:. .: .. ... :
XP_016 TNVAMASNQAVRIVKEPTSHDNKDICKSDAGNLNFEFQVAKKEGSWWHCNSCSLKNASTA
1310 1320 1330 1340 1350 1360
460 470 480 490 500
pF1KB0 -RFVASKPLEEEEMEV---PVLPKISLPITS--SSLPTFNFSSPEIT---TSSPSPINSS
. :. . :. . :. :. . : :: . : . .:. : . .
XP_016 KKCVSCQNLNPSNKELVGPPLAETVFTPKTSPENVQDRFALVTPKKEGHWDCSICLVRNE
1370 1380 1390 1400 1410 1420
510 520 530 540 550 560
pF1KB0 QALTNKV--QMT-SPSSTGSPMFKFSSPIVKSTEANVLPPSSIGFTFSVPVAKTAELSGS
... . : : : ...:: . . .: : .... : . : :: .: .. . :
XP_016 PTVSRCIACQNTKSANKSGSSFVHQAS--FKFGQGDLPKPINSDFR-SVFSTKEGQWDCS
1430 1440 1450 1460 1470 1480
570 580 590 600 610
pF1KB0 SSTLEPIISSSGFASPKIDSVAAQPTATSPVVYTRPAISSFSSSGI--GFGESL-KAGSS
. .. ::. :. . . :... :. . .: .:. . :: . . : ..
XP_016 ACLVQNEGSSTKCAACQNPRKQSLPATSIPTPASFKFGTSETSKTLKSGFEDMFAKKEGQ
1490 1500 1510 1520 1530 1540
620 630 640 650 660 670
pF1KB0 WQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQTGIETPN--KSGKTTLS-ASGTGFGDK
:.:..::..:... ..:.::: .: . .:.. .: : : . : : .::
XP_016 WDCSSCLVRNEANATRCVACQ----NPDKPSPSTSVPAPASFKFGTSETSKAPKSGFEGM
1550 1560 1570 1580 1590 1600
680 690 700 710 720 730
pF1KB0 FKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTCVKRALTLTVVSESAETMTASSSSCT
: : :::..:::.:. : ::.::..: : :. : ..:: : . :... .
XP_016 FTKKEGQWDCSVCLVRNEASATKCIACQNP--G---KQNQTTSAVSTPASSETSKAPKS-
1610 1620 1630 1640 1650
740 750 760 770 780 790
pF1KB0 VTTGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVSCMSEKPGSSVPASSSSTVPVS--
:: : . :.:.:::: : :.: .::..: ..::.. ..:. ..:.:
XP_016 ------GFEGMFTKKEGQWDCSVCLVRNEASATKCIAC--QNPGKQNQTTSAVSTPASSE
1660 1670 1680 1690 1700
800 810 820 830
pF1KB0 ---LPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACES----------AKPGT--
:..: :. : : ::.::: .:::.:.:..:::.::. . :..
XP_016 TSKAPKSGFEGM--FTKKEGQWDCSVCLVRNEASATKCIACQCPSKQNQTTAISTPASSE
1710 1720 1730 1740 1750 1760
840 850 860 870
pF1KB0 -----KSGFKG-------FDTSSSSSNSAASSSFKFGVSSSSSGPSQ--------TLTST
::::.: .: : .. :::.: :. ..: :.. ..:
XP_016 ISKAPKSGFEGMFIRKGQWDCSVCCVQNE-SSSLKC-VACDASKPTHKPIAEAPSAFTLG
1770 1780 1790 1800 1810 1820
880 890 900 910 920 930
pF1KB0 GNFKFGDQGGFKIGVSSDSGSINPMSEGFKFSKPIGDFKFG-VSSESKPEEVKKDSKNDN
...:. :..: ..:.. : : .. ::.. :::: :..:..: . . :.: .
XP_016 SEMKLHDSSGSQVGTGFKS---NFSEKASKFGNTEQGFKFGHVDQENSPSFMFQGSSNTE
1830 1840 1850 1860 1870 1880
940 950 960 970 980 990
pF1KB0 FKFGLSSGLSNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIV
:: . . :.: ::: :.::.:. :..::: : : ...::. . . : . ..
XP_016 FK-STKEGFSIPVSADGFKFGISEPGNQEKKSEKPLENGTGFQ-AQDI--SGQKNGRGVI
1890 1900 1910 1920 1930
1000 1010 1020 1030 1040 1050
pF1KB0 TSENKSSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVL
....:.:... . .::.: : .::. : :: ::
XP_016 FGQTSSTFTFADL-AKSTSGEGFQF----GKKD--PNFKG-FSGAGEKLFSSQYGKMANK
1940 1950 1960 1970 1980
1060 1070 1080 1090 1100 1110
pF1KB0 GRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSE
XP_016 ANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEV
1990 2000 2010 2020 2030 2040
1433 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 22:33:29 2016 done: Wed Nov 2 22:33:32 2016
Total Scan time: 19.800 Total Display time: 0.610
Function used was FASTA [36.3.4 Apr, 2011]