Result of FASTA (ccds) for
pF1KB0054
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0054, 1036 aa
1>>>pF1KB0054 1036 - 1036 aa - 1036 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.0811+/-0.00141; mu= 11.9735+/- 0.083
mean_var=96.0647+/-19.544, 0's: 0 Z-trim(101.1): 100 B-trim: 33 in 1/51
Lambda= 0.130856
statistics sampled from 6283 (6384) to 6283 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.533), E-opt: 0.2 (0.196), width: 16
Scan time: 4.410
The best scores are: opt bits E(32554)
CCDS35502.1 OGT gene_id:8473|Hs108|chrX (1036) 6953 1324.3 0
CCDS14414.1 OGT gene_id:8473|Hs108|chrX (1046) 6883 1311.1 0
CCDS66575.1 TMTC4 gene_id:84899|Hs108|chr13 ( 630) 378 83.0 2.2e-15
CCDS41904.1 TMTC4 gene_id:84899|Hs108|chr13 ( 741) 378 83.0 2.6e-15
CCDS9497.2 TMTC4 gene_id:84899|Hs108|chr13 ( 760) 378 83.0 2.6e-15
CCDS8718.1 TMTC1 gene_id:83857|Hs108|chr12 ( 774) 345 76.8 2e-13
CCDS53772.1 TMTC1 gene_id:83857|Hs108|chr12 ( 882) 345 76.8 2.3e-13
>>CCDS35502.1 OGT gene_id:8473|Hs108|chrX (1036 aa)
initn: 6953 init1: 6953 opt: 6953 Z-score: 7094.3 bits: 1324.3 E(32554): 0
Smith-Waterman score: 6953; 100.0% identity (100.0% similar) in 1036 aa overlap (1-1036:1-1036)
10 20 30 40 50 60
pF1KB0 MASSVGNVADSTGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MASSVGNVADSTGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 LDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 AALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 ALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 EAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 EAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFAD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 AHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 AHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 SIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 SIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHKPPYEHPKDLK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 LSDGRLRVGYVSSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTNFRVKVMAEAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 LSDGRLRVGYVSSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTNFRVKVMAEAN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 HFIDLSQIPCNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 HFIDLSQIPCNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPGTSG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 ALFMDYIITDQETSPAEVAEQYSEKLAYMPHTFFIGDHANMFPHLKKKAVIDFKSNGHIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 ALFMDYIITDQETSPAEVAEQYSEKLAYMPHTFFIGDHANMFPHLKKKAVIDFKSNGHIY
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 DNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNADSSNTALNMPVIPMNTIAEAVIEMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 DNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNADSSNTALNMPVIPMNTIAEAVIEMI
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 NRGQIQITINGFSISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPEDAIVYCNFNQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 NRGQIQITINGFSISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPEDAIVYCNFNQL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEE
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 HVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 HVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 KNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 KNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHYAAG
970 980 990 1000 1010 1020
1030
pF1KB0 NKPDHMIKPVEVTESA
::::::::::::::::
CCDS35 NKPDHMIKPVEVTESA
1030
>>CCDS14414.1 OGT gene_id:8473|Hs108|chrX (1046 aa)
initn: 6883 init1: 6883 opt: 6883 Z-score: 7022.8 bits: 1311.1 E(32554): 0
Smith-Waterman score: 6923; 99.0% identity (99.0% similar) in 1046 aa overlap (1-1036:1-1046)
10 20 30 40 50
pF1KB0 MASSVGNVADST----------GLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLL
:::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS14 MASSVGNVADSTEPTKRMLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 LSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB0 LKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARI
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB0 FDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLA
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB0 NALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB0 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTR
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB0 AIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT
430 440 450 460 470 480
480 490 500 510 520 530
pF1KB0 DYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKINVLHK
490 500 510 520 530 540
540 550 560 570 580 590
pF1KB0 PPYEHPKDLKLSDGRLRVGYVSSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 PPYEHPKDLKLSDGRLRVGYVSSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTN
550 560 570 580 590 600
600 610 620 630 640 650
pF1KB0 FRVKVMAEANHFIDLSQIPCNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FRVKVMAEANHFIDLSQIPCNGKAADRIHQDGIHILVNMNGYTKGARNELFALRPAPIQA
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB0 MWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPHTFFIGDHANMFPHLKKKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPHTFFIGDHANMFPHLKKKAV
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB0 IDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNADSSNTALNMPVIPMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDGGDNADSSNTALNMPVIPMN
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB0 TIAEAVIEMINRGQIQITINGFSISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TIAEAVIEMINRGQIQITINGFSISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPED
790 800 810 820 830 840
840 850 860 870 880 890
pF1KB0 AIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 AIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRI
850 860 870 880 890 900
900 910 920 930 940 950
pF1KB0 IFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL
910 920 930 940 950 960
960 970 980 990 1000 1010
pF1KB0 TCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 TCLGCLELIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLY
970 980 990 1000 1010 1020
1020 1030
pF1KB0 LQMWEHYAAGNKPDHMIKPVEVTESA
::::::::::::::::::::::::::
CCDS14 LQMWEHYAAGNKPDHMIKPVEVTESA
1030 1040
>>CCDS66575.1 TMTC4 gene_id:84899|Hs108|chr13 (630 aa)
initn: 628 init1: 354 opt: 378 Z-score: 389.6 bits: 83.0 E(32554): 2.2e-15
Smith-Waterman score: 378; 32.9% identity (65.7% similar) in 213 aa overlap (71-280:397-606)
50 60 70 80 90 100
pF1KB0 EPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIE
:.. :: ..:..::::. :::..:::: :
CCDS66 CPLNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEE
370 380 390 400 410 420
110 120 130 140 150
pF1KB0 HYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN---PDLYCVRSDLGNLL
:....::: ...::. . . .:.: :.: .:... :: : .:: :
CCDS66 LLSLAVQIQPDFAAAWMNLGIVQNSLKRFEAAEQSYRTAIKHRRKYPDCY---YNLGRLY
430 440 450 460 470 480
160 170 180 190 200 210
pF1KB0 KALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA
:.: .: . .: .:. ..::.:. ... :.. : ..:. : :: .
CCDS66 ADLNRHVDALNAWRNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALELIPNDHSL
490 500 510 520 530 540
220 230 240 250 260 270
pF1KB0 YINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIE
...:.::: ... . .. : .:.:.. .:: : ::::: .:.. : .::: :. ...
CCDS66 MFSLANVLGKSQKYKESEALFLKAIKANPNAASYHGNLAVLYHRWGHLDLAKKHYEISLQ
550 560 570 580 590 600
280 290 300 310 320 330
pF1KB0 LQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV
:.:
CCDS66 LDPTASGTKENYGLLRRKLELMQKKAV
610 620 630
>>CCDS41904.1 TMTC4 gene_id:84899|Hs108|chr13 (741 aa)
initn: 628 init1: 354 opt: 378 Z-score: 388.4 bits: 83.0 E(32554): 2.6e-15
Smith-Waterman score: 378; 32.9% identity (65.7% similar) in 213 aa overlap (71-280:508-717)
50 60 70 80 90 100
pF1KB0 EPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIE
:.. :: ..:..::::. :::..:::: :
CCDS41 CPLNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEE
480 490 500 510 520 530
110 120 130 140 150
pF1KB0 HYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN---PDLYCVRSDLGNLL
:....::: ...::. . . .:.: :.: .:... :: : .:: :
CCDS41 LLSLAVQIQPDFAAAWMNLGIVQNSLKRFEAAEQSYRTAIKHRRKYPDCY---YNLGRLY
540 550 560 570 580 590
160 170 180 190 200 210
pF1KB0 KALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA
:.: .: . .: .:. ..::.:. ... :.. : ..:. : :: .
CCDS41 ADLNRHVDALNAWRNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALELIPNDHSL
600 610 620 630 640 650
220 230 240 250 260 270
pF1KB0 YINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIE
...:.::: ... . .. : .:.:.. .:: : ::::: .:.. : .::: :. ...
CCDS41 MFSLANVLGKSQKYKESEALFLKAIKANPNAASYHGNLAVLYHRWGHLDLAKKHYEISLQ
660 670 680 690 700 710
280 290 300 310 320 330
pF1KB0 LQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV
:.:
CCDS41 LDPTASGTKENYGLLRRKLELMQKKAV
720 730 740
>>CCDS9497.2 TMTC4 gene_id:84899|Hs108|chr13 (760 aa)
initn: 628 init1: 354 opt: 378 Z-score: 388.2 bits: 83.0 E(32554): 2.6e-15
Smith-Waterman score: 378; 32.9% identity (65.7% similar) in 213 aa overlap (71-280:527-736)
50 60 70 80 90 100
pF1KB0 EPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIE
:.. :: ..:..::::. :::..:::: :
CCDS94 CPLNAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEE
500 510 520 530 540 550
110 120 130 140 150
pF1KB0 HYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYN---PDLYCVRSDLGNLL
:....::: ...::. . . .:.: :.: .:... :: : .:: :
CCDS94 LLSLAVQIQPDFAAAWMNLGIVQNSLKRFEAAEQSYRTAIKHRRKYPDCY---YNLGRLY
560 570 580 590 600 610
160 170 180 190 200 210
pF1KB0 KALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA
:.: .: . .: .:. ..::.:. ... :.. : ..:. : :: .
CCDS94 ADLNRHVDALNAWRNATVLKPEHSLAWNNMIILLDNTGNLAQAEAVGREALELIPNDHSL
620 630 640 650 660 670
220 230 240 250 260 270
pF1KB0 YINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIE
...:.::: ... . .. : .:.:.. .:: : ::::: .:.. : .::: :. ...
CCDS94 MFSLANVLGKSQKYKESEALFLKAIKANPNAASYHGNLAVLYHRWGHLDLAKKHYEISLQ
680 690 700 710 720 730
280 290 300 310 320 330
pF1KB0 LQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV
:.:
CCDS94 LDPTASGTKENYGLLRRKLELMQKKAV
740 750 760
>>CCDS8718.1 TMTC1 gene_id:83857|Hs108|chr12 (774 aa)
initn: 877 init1: 268 opt: 345 Z-score: 354.4 bits: 76.8 E(32554): 2e-13
Smith-Waterman score: 472; 28.5% identity (58.2% similar) in 404 aa overlap (61-460:358-756)
40 50 60 70 80 90
pF1KB0 ERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYK
:.: . : . ... : :... : .: :
CCDS87 NRCGATTLIVSTVLLLLLFSWKTVKQNEIWLSRESLFRS-GVQTLPHNAKVHYNYANFLK
330 340 350 360 370 380
100 110 120 130 140 150
pF1KB0 ERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVR
..:. .::: ::: ::.: : .. ::.. . : : . : ::: .:. .
CCDS87 DQGRNKEAIYHYRTALKLYPRHASALNNLGTL---TRDTAEAKMYYQRALQLHPQHNRAL
390 400 410 420 430 440
160 170 180 190 200 210
pF1KB0 SDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTL
.::::::. . ::: . .:. :.:: :.:.:. .. : .. : . .. ..
CCDS87 FNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKN
450 460 470 480 490 500
220 230 240 250 260 270
pF1KB0 DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAID
:. : . : : : .. . ..::: : .:..:::.: :. ::. .: : ..: .
CCDS87 CPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEE
510 520 530 540 550 560
280 290 300 310 320 330
pF1KB0 TYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQ
:.::... : . :. . : :: . :. : : :.. . ::.. .
CCDS87 WYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVM
570 580 590 600 610 620
340 350 360 370 380
pF1KB0 GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP----TFAD
:. .:: .. . . . :... ..: . ..:: .:....: ....
CCDS87 GQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVISE
630 640 650 660 670 680
390 400 410 420 430 440
pF1KB0 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL
. . :: :.:.. .. :.. : :.:.:: :.: :...:.. .:. : : :. ::
CCDS87 LFFTKGNQLREQNLLDKAFESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERAL
690 700 710 720 730 740
450 460 470 480 490 500
pF1KB0 KLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLS
.: :: :::
CCDS87 QLVPDSKLLKENLAKLDRLEKRLQEVREKDQT
750 760 770
>>CCDS53772.1 TMTC1 gene_id:83857|Hs108|chr12 (882 aa)
initn: 819 init1: 268 opt: 345 Z-score: 353.5 bits: 76.8 E(32554): 2.3e-13
Smith-Waterman score: 472; 28.5% identity (58.2% similar) in 404 aa overlap (61-460:466-864)
40 50 60 70 80 90
pF1KB0 ERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYK
:.: . : . ... : :... : .: :
CCDS53 NRCGATTLIVSTVLLLLLFSWKTVKQNEIWLSRESLFRS-GVQTLPHNAKVHYNYANFLK
440 450 460 470 480 490
100 110 120 130 140 150
pF1KB0 ERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVR
..:. .::: ::: ::.: : .. ::.. . : : . : ::: .:. .
CCDS53 DQGRNKEAIYHYRTALKLYPRHASALNNLGTL---TRDTAEAKMYYQRALQLHPQHNRAL
500 510 520 530 540 550
160 170 180 190 200 210
pF1KB0 SDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTL
.::::::. . ::: . .:. :.:: :.:.:. .. : .. : . .. ..
CCDS53 FNLGNLLKSQEKKEEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKN
560 570 580 590 600 610
220 230 240 250 260 270
pF1KB0 DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAID
:. : . : : : .. . ..::: : .:..:::.: :. ::. .: : ..: .
CCDS53 CPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEE
620 630 640 650 660 670
280 290 300 310 320 330
pF1KB0 TYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQ
:.::... : . :. . : :: . :. : : :.. . ::.. .
CCDS53 WYKRALQVA-HKAEILSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVM
680 690 700 710 720 730
340 350 360 370 380
pF1KB0 GNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISP----TFAD
:. .:: .. . . . :... ..: . ..:: .:....: ....
CCDS53 GQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVISE
740 750 760 770 780 790
390 400 410 420 430 440
pF1KB0 AYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTAL
. . :: :.:.. .. :.. : :.:.:: :.: :...:.. .:. : : :. ::
CCDS53 LFFTKGNQLREQNLLDKAFESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERAL
800 810 820 830 840 850
450 460 470 480 490 500
pF1KB0 KLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLS
.: :: :::
CCDS53 QLVPDSKLLKENLAKLDRLEKRLQEVREKDQT
860 870 880
1036 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:24:34 2016 done: Sat Nov 5 02:24:35 2016
Total Scan time: 4.410 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]