Result of FASTA (omim) for
pF1KB0179
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0179, 1220 aa
1>>>pF1KB0179 1220 - 1220 aa - 1220 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5865+/-0.000585; mu= 18.3207+/- 0.036
mean_var=257.3644+/-54.997, 0's: 0 Z-trim(113.7): 281 B-trim: 1697 in 3/54
Lambda= 0.079947
statistics sampled from 22750 (23171) to 22750 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.272), width: 16
Scan time: 16.630
The best scores are: opt bits E(85289)
NP_004932 (OMIM: 600396) ATP-dependent RNA helicas (1220) 8040 943.0 0
NP_001309150 (OMIM: 600396) ATP-dependent RNA heli (1218) 8011 939.7 0
NP_001309148 (OMIM: 600396) ATP-dependent RNA heli (1169) 7562 887.9 0
NP_001309149 (OMIM: 600396) ATP-dependent RNA heli (1152) 7542 885.6 0
NP_001289552 (OMIM: 600396) ATP-dependent RNA heli (1181) 7542 885.6 0
NP_001309147 (OMIM: 600396) ATP-dependent RNA heli (1179) 7513 882.2 0
NP_001309146 (OMIM: 600396) ATP-dependent RNA heli (1129) 7485 879.0 0
NP_001309145 (OMIM: 600396) ATP-dependent RNA heli ( 945) 6234 734.6 7.4e-211
XP_011513241 (OMIM: 603405) PREDICTED: putative pr ( 742) 2590 314.1 2.2e-84
XP_011513240 (OMIM: 603405) PREDICTED: putative pr ( 742) 2590 314.1 2.2e-84
NP_001157711 (OMIM: 603405) putative pre-mRNA-spli ( 981) 2590 314.3 2.5e-84
NP_003578 (OMIM: 603405) putative pre-mRNA-splicin (1041) 2590 314.3 2.6e-84
NP_054722 (OMIM: 605584) pre-mRNA-splicing factor (1227) 2545 309.2 1e-82
XP_011521786 (OMIM: 605584) PREDICTED: pre-mRNA-sp (1227) 2545 309.2 1e-82
XP_011521787 (OMIM: 605584) PREDICTED: pre-mRNA-sp (1227) 2545 309.2 1e-82
XP_005256326 (OMIM: 605584) PREDICTED: pre-mRNA-sp (1192) 2481 301.8 1.7e-80
XP_016879402 (OMIM: 605584) PREDICTED: pre-mRNA-sp (1192) 2481 301.8 1.7e-80
NP_001349 (OMIM: 603403) pre-mRNA-splicing factor ( 795) 2145 262.8 6.3e-69
XP_011513242 (OMIM: 603405) PREDICTED: putative pr ( 560) 2069 253.8 2.3e-66
XP_011513243 (OMIM: 603405) PREDICTED: putative pr ( 524) 2053 251.9 8e-66
NP_064547 (OMIM: 614405) putative ATP-dependent RN ( 707) 1880 232.2 9.5e-60
NP_001186628 (OMIM: 614405) putative ATP-dependent ( 534) 1518 190.2 3e-47
XP_011525853 (OMIM: 615475) PREDICTED: probable AT (1143) 1222 156.6 8.6e-37
XP_005259500 (OMIM: 615475) PREDICTED: probable AT (1143) 1222 156.6 8.6e-37
NP_055496 (OMIM: 615475) probable ATP-dependent RN (1143) 1222 156.6 8.6e-37
XP_011525852 (OMIM: 615475) PREDICTED: probable AT (1143) 1222 156.6 8.6e-37
XP_016871893 (OMIM: 607960) PREDICTED: putative pr ( 743) 1161 149.3 8.9e-35
XP_016871894 (OMIM: 607960) PREDICTED: putative pr ( 743) 1161 149.3 8.9e-35
NP_060650 (OMIM: 607960) putative pre-mRNA-splicin ( 743) 1161 149.3 8.9e-35
XP_016880571 (OMIM: 607570) PREDICTED: probable AT ( 640) 913 120.6 3.4e-26
XP_016880572 (OMIM: 607570) PREDICTED: probable AT ( 640) 913 120.6 3.4e-26
XP_011523556 (OMIM: 607570) PREDICTED: probable AT ( 680) 913 120.6 3.5e-26
NP_001159773 (OMIM: 607570) probable ATP-dependent ( 702) 913 120.6 3.5e-26
XP_016880569 (OMIM: 607570) PREDICTED: probable AT ( 723) 913 120.7 3.6e-26
NP_078888 (OMIM: 607570) probable ATP-dependent RN ( 779) 913 120.7 3.7e-26
XP_006722146 (OMIM: 607570) PREDICTED: probable AT ( 752) 812 109.0 1.2e-22
XP_011523555 (OMIM: 607570) PREDICTED: probable AT ( 718) 725 99.0 1.2e-19
XP_016880366 (OMIM: 614405) PREDICTED: putative AT ( 279) 702 95.7 4.6e-19
NP_065916 (OMIM: 612767) ATP-dependent RNA helicas (1008) 693 95.5 1.9e-18
XP_016880570 (OMIM: 607570) PREDICTED: probable AT ( 653) 617 86.4 6.5e-16
NP_001107869 (OMIM: 612767) ATP-dependent RNA heli ( 994) 595 84.2 4.7e-15
NP_055781 (OMIM: 616423) putative ATP-dependent RN (1155) 558 80.0 9.8e-14
XP_016861406 (OMIM: 616423) PREDICTED: putative AT (1155) 558 80.0 9.8e-14
XP_016861405 (OMIM: 616423) PREDICTED: putative AT (1157) 558 80.0 9.8e-14
XP_016861404 (OMIM: 616423) PREDICTED: putative AT (1162) 558 80.0 9.8e-14
XP_006713096 (OMIM: 616423) PREDICTED: putative AT (1162) 558 80.0 9.8e-14
XP_011531799 (OMIM: 616423) PREDICTED: putative AT (1166) 558 80.0 9.8e-14
XP_011531800 (OMIM: 616423) PREDICTED: putative AT (1166) 558 80.0 9.8e-14
XP_011531798 (OMIM: 616423) PREDICTED: putative AT (1166) 558 80.0 9.8e-14
NP_001317919 (OMIM: 616423) putative ATP-dependent (1166) 558 80.0 9.8e-14
>>NP_004932 (OMIM: 600396) ATP-dependent RNA helicase DH (1220 aa)
initn: 8040 init1: 8040 opt: 8040 Z-score: 5031.2 bits: 943.0 E(85289): 0
Smith-Waterman score: 8040; 100.0% identity (100.0% similar) in 1220 aa overlap (1-1220:1-1220)
10 20 30 40 50 60
pF1KB0 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB0 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB0 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB0 LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
1150 1160 1170 1180 1190 1200
1210 1220
pF1KB0 LYNRYEEPNAWRISRAFRRR
::::::::::::::::::::
NP_004 LYNRYEEPNAWRISRAFRRR
1210 1220
>>NP_001309150 (OMIM: 600396) ATP-dependent RNA helicase (1218 aa)
initn: 6971 init1: 6971 opt: 8011 Z-score: 5013.2 bits: 939.7 E(85289): 0
Smith-Waterman score: 8011; 99.8% identity (99.8% similar) in 1220 aa overlap (1-1220:1-1218)
10 20 30 40 50 60
pF1KB0 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
:::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
NP_001 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHR--TKKKKRSRSR
130 140 150 160 170
190 200 210 220 230 240
pF1KB0 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB0 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB0 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB0 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB0 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB0 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB0 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB0 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB0 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB0 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
720 730 740 750 760 770
790 800 810 820 830 840
pF1KB0 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
780 790 800 810 820 830
850 860 870 880 890 900
pF1KB0 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
840 850 860 870 880 890
910 920 930 940 950 960
pF1KB0 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
900 910 920 930 940 950
970 980 990 1000 1010 1020
pF1KB0 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
960 970 980 990 1000 1010
1030 1040 1050 1060 1070 1080
pF1KB0 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
1020 1030 1040 1050 1060 1070
1090 1100 1110 1120 1130 1140
pF1KB0 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
1080 1090 1100 1110 1120 1130
1150 1160 1170 1180 1190 1200
pF1KB0 LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
1140 1150 1160 1170 1180 1190
1210 1220
pF1KB0 LYNRYEEPNAWRISRAFRRR
::::::::::::::::::::
NP_001 LYNRYEEPNAWRISRAFRRR
1200 1210
>>NP_001309148 (OMIM: 600396) ATP-dependent RNA helicase (1169 aa)
initn: 7798 init1: 7562 opt: 7562 Z-score: 4733.4 bits: 887.9 E(85289): 0
Smith-Waterman score: 7562; 99.8% identity (99.9% similar) in 1151 aa overlap (1-1151:1-1151)
10 20 30 40 50 60
pF1KB0 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB0 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB0 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB0 LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
:::::::: .:
NP_001 LFNRQPEWDLYSRFSEWKSGTNCSSLSGT
1150 1160
>>NP_001309149 (OMIM: 600396) ATP-dependent RNA helicase (1152 aa)
initn: 7542 init1: 7542 opt: 7542 Z-score: 4721.0 bits: 885.6 E(85289): 0
Smith-Waterman score: 7542; 100.0% identity (100.0% similar) in 1147 aa overlap (1-1147:1-1147)
10 20 30 40 50 60
pF1KB0 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB0 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB0 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB0 LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
:::::::
NP_001 LFNRQPECISQD
1150
>>NP_001289552 (OMIM: 600396) ATP-dependent RNA helicase (1181 aa)
initn: 7542 init1: 7542 opt: 7542 Z-score: 4720.9 bits: 885.6 E(85289): 0
Smith-Waterman score: 7542; 100.0% identity (100.0% similar) in 1147 aa overlap (1-1147:1-1147)
10 20 30 40 50 60
pF1KB0 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB0 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB0 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB0 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB0 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB0 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB0 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB0 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB0 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB0 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB0 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB0 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KB0 LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
:::::::
NP_001 LFNRQPECPKHFLPVVAVAVSLEQCLSKFEDLNKELGLVTC
1150 1160 1170 1180
>>NP_001309147 (OMIM: 600396) ATP-dependent RNA helicase (1179 aa)
initn: 6473 init1: 6473 opt: 7513 Z-score: 4702.9 bits: 882.2 E(85289): 0
Smith-Waterman score: 7513; 99.8% identity (99.8% similar) in 1147 aa overlap (1-1147:1-1145)
10 20 30 40 50 60
pF1KB0 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAVAVAMAGALIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSR
::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::
NP_001 VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEH--RTKKKKRSRSR
130 140 150 160 170
190 200 210 220 230 240
pF1KB0 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB0 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB0 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB0 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB0 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB0 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
480 490 500 510 520 530
550 560 570 580 590 600
pF1KB0 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
540 550 560 570 580 590
610 620 630 640 650 660
pF1KB0 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
600 610 620 630 640 650
670 680 690 700 710 720
pF1KB0 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
660 670 680 690 700 710
730 740 750 760 770 780
pF1KB0 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
720 730 740 750 760 770
790 800 810 820 830 840
pF1KB0 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
780 790 800 810 820 830
850 860 870 880 890 900
pF1KB0 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
840 850 860 870 880 890
910 920 930 940 950 960
pF1KB0 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
900 910 920 930 940 950
970 980 990 1000 1010 1020
pF1KB0 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
960 970 980 990 1000 1010
1030 1040 1050 1060 1070 1080
pF1KB0 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
1020 1030 1040 1050 1060 1070
1090 1100 1110 1120 1130 1140
pF1KB0 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
1080 1090 1100 1110 1120 1130
1150 1160 1170 1180 1190 1200
pF1KB0 LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
:::::::
NP_001 LFNRQPECPKHFLPVVAVAVSLEQCLSKFEDLNKELGLVTC
1140 1150 1160 1170
>>NP_001309146 (OMIM: 600396) ATP-dependent RNA helicase (1129 aa)
initn: 7485 init1: 7485 opt: 7485 Z-score: 4685.6 bits: 879.0 E(85289): 0
Smith-Waterman score: 7485; 100.0% identity (100.0% similar) in 1129 aa overlap (92-1220:1-1129)
70 80 90 100 110 120
pF1KB0 TFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPV
::::::::::::::::::::::::::::::
NP_001 MRPPAKPSTSKDPVVKPKTEKEKLKELFPV
10 20 30
130 140 150 160 170 180
pF1KB0 LCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKRSRSRD
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB0 RNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNRDRDRDRERNRDRDHKRRHRSRSRSRSRTRERNKVKSRYRSRSRSQSPPKDRKDRDKY
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB0 GERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELR
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB0 REGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEE
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB0 TSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDE
280 290 300 310 320 330
430 440 450 460 470 480
pF1KB0 ETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSA
340 350 360 370 380 390
490 500 510 520 530 540
pF1KB0 LAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKH
400 410 420 430 440 450
550 560 570 580 590 600
pF1KB0 AFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQY
460 470 480 490 500 510
610 620 630 640 650 660
pF1KB0 LAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYM
520 530 540 550 560 570
670 680 690 700 710 720
pF1KB0 TDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLD
580 590 600 610 620 630
730 740 750 760 770 780
pF1KB0 AVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLT
640 650 660 670 680 690
790 800 810 820 830 840
pF1KB0 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNI
700 710 720 730 740 750
850 860 870 880 890 900
pF1KB0 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYR
760 770 780 790 800 810
910 920 930 940 950 960
pF1KB0 LYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQL
820 830 840 850 860 870
970 980 990 1000 1010 1020
pF1KB0 YTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRP
880 890 900 910 920 930
1030 1040 1050 1060 1070 1080
pF1KB0 KDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQ
940 950 960 970 980 990
1090 1100 1110 1120 1130 1140
pF1KB0 MLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSAL
1000 1010 1020 1030 1040 1050
1150 1160 1170 1180 1190 1200
pF1KB0 FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPL
1060 1070 1080 1090 1100 1110
1210 1220
pF1KB0 YNRYEEPNAWRISRAFRRR
:::::::::::::::::::
NP_001 YNRYEEPNAWRISRAFRRR
1120
>>NP_001309145 (OMIM: 600396) ATP-dependent RNA helicase (945 aa)
initn: 6234 init1: 6234 opt: 6234 Z-score: 3906.5 bits: 734.6 E(85289): 7.4e-211
Smith-Waterman score: 6234; 100.0% identity (100.0% similar) in 945 aa overlap (276-1220:1-945)
250 260 270 280 290 300
pF1KB0 LDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGR
::::::::::::::::::::::::::::::
NP_001 MQFGCFVQLEGLRKRWEGLVHISELRREGR
10 20 30
310 320 330 340 350 360
pF1KB0 VANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMR
40 50 60 70 80 90
370 380 390 400 410 420
pF1KB0 NPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGI
100 110 120 130 140 150
430 440 450 460 470 480
pF1KB0 LPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKE
160 170 180 190 200 210
490 500 510 520 530 540
pF1KB0 RRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGG
220 230 240 250 260 270
550 560 570 580 590 600
pF1KB0 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEA
280 290 300 310 320 330
610 620 630 640 650 660
pF1KB0 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGM
340 350 360 370 380 390
670 680 690 700 710 720
pF1KB0 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKF
400 410 420 430 440 450
730 740 750 760 770 780
pF1KB0 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEE
460 470 480 490 500 510
790 800 810 820 830 840
pF1KB0 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETS
520 530 540 550 560 570
850 860 870 880 890 900
pF1KB0 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTE
580 590 600 610 620 630
910 920 930 940 950 960
pF1KB0 RAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLG
640 650 660 670 680 690
970 980 990 1000 1010 1020
pF1KB0 ALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQ
700 710 720 730 740 750
1030 1040 1050 1060 1070 1080
pF1KB0 ALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGI
760 770 780 790 800 810
1090 1100 1110 1120 1130 1140
pF1KB0 MDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQ
820 830 840 850 860 870
1150 1160 1170 1180 1190 1200
pF1KB0 PEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRY
880 890 900 910 920 930
1210 1220
pF1KB0 EEPNAWRISRAFRRR
:::::::::::::::
NP_001 EEPNAWRISRAFRRR
940
>>XP_011513241 (OMIM: 603405) PREDICTED: putative pre-mR (742 aa)
initn: 2546 init1: 1960 opt: 2590 Z-score: 1636.1 bits: 314.1 E(85289): 2.2e-84
Smith-Waterman score: 2590; 57.3% identity (84.3% similar) in 654 aa overlap (553-1199:88-740)
530 540 550 560 570 580
pF1KB0 ANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQ
. . :: :.:::.. ..:.:. :. ..:
XP_011 LEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQ
60 70 80 90 100 110
590 600 610 620 630 640
pF1KB0 ILIVIGETGSGKTTQITQYLAEAGYTSRG-KIGCTQPRRVAAMSVAKRVSEEFGCCLGQE
.::. ::::::::::: ::: : :::..: ::.::::::::::::: ::..:.: ::.:
XP_011 VLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE
120 130 140 150 160 170
650 660 670 680 690 700
pF1KB0 VGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLL
:::.:::::::: .::..:::::::::: : .:::..:...:.:::::::.:::.::::.
XP_011 VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI
180 190 200 210 220 230
710 720 730 740 750 760
pF1KB0 KKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASL
: ... : ..:..:.:::.:...:: .: .::.: :::: .::.:.::: ::.:::.: .
XP_011 KDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACV
240 250 260 270 280 290
770 780 790 800 810 820
pF1KB0 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ
..:.:::.:.:::::::::::::::..:::.: .: . :: . ::..::.:. :::.::
XP_011 VSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ
300 310 320 330 340 350
830 840 850 860 870 880
pF1KB0 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ
.:::.:.:::.::::.:::::::::::.:: ::.:::: ::: :: .::...:.::: :.
XP_011 ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK
360 370 380 390 400 410
890 900 910 920 930 940
pF1KB0 AQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLL
:.:.::::::::.. :::.:::: ::. :. :.:::::::.:...:: ::..::.::.
XP_011 ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLM
420 430 440 450 460 470
950 960 970 980 990 1000
pF1KB0 SFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGC
:::.: ::.:::. :.::::.::::. : :: ::.:::.:..::: ::.. : . .:
XP_011 HFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSC
480 490 500 510 520 530
1010 1020 1030 1040 1050 1060
pF1KB0 SEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNP
:::.::...::::.: .::::::: . ::. ...: ::::.:: ::..: .. .:.
XP_011 SEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQ
540 550 560 570 580 590
1070 1080 1090 1100 1110 1120
pF1KB0 WCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDP
::::::.: ::.:::.:.:.:. :...: .. . :: . .::.::: .:.: ..:.
XP_011 WCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-
600 610 620 630 640 650
1130 1140 1150 1160 1170 1180
pF1KB0 QEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAF
. ::::. .::.:.:::.:.::..::.:..::::::::::.::.: :. ::.: :: .
XP_011 RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY
660 670 680 690 700 710
1190 1200 1210 1220
pF1KB0 FKVS---DP--TKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
.:.. :: :. :. . : :
XP_011 YKAKELEDPHAKKMPKKIGKTREELG
720 730 740
>>XP_011513240 (OMIM: 603405) PREDICTED: putative pre-mR (742 aa)
initn: 2546 init1: 1960 opt: 2590 Z-score: 1636.1 bits: 314.1 E(85289): 2.2e-84
Smith-Waterman score: 2590; 57.3% identity (84.3% similar) in 654 aa overlap (553-1199:88-740)
530 540 550 560 570 580
pF1KB0 ANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQ
. . :: :.:::.. ..:.:. :. ..:
XP_011 LEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQ
60 70 80 90 100 110
590 600 610 620 630 640
pF1KB0 ILIVIGETGSGKTTQITQYLAEAGYTSRG-KIGCTQPRRVAAMSVAKRVSEEFGCCLGQE
.::. ::::::::::: ::: : :::..: ::.::::::::::::: ::..:.: ::.:
XP_011 VLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE
120 130 140 150 160 170
650 660 670 680 690 700
pF1KB0 VGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLL
:::.:::::::: .::..:::::::::: : .:::..:...:.:::::::.:::.::::.
XP_011 VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI
180 190 200 210 220 230
710 720 730 740 750 760
pF1KB0 KKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASL
: ... : ..:..:.:::.:...:: .: .::.: :::: .::.:.::: ::.:::.: .
XP_011 KDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACV
240 250 260 270 280 290
770 780 790 800 810 820
pF1KB0 ITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQ
..:.:::.:.:::::::::::::::..:::.: .: . :: . ::..::.:. :::.::
XP_011 VSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ
300 310 320 330 340 350
830 840 850 860 870 880
pF1KB0 TRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQ
.:::.:.:::.::::.:::::::::::.:: ::.:::: ::: :: .::...:.::: :.
XP_011 ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK
360 370 380 390 400 410
890 900 910 920 930 940
pF1KB0 AQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLL
:.:.::::::::.. :::.:::: ::. :. :.:::::::.:...:: ::..::.::.
XP_011 ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLM
420 430 440 450 460 470
950 960 970 980 990 1000
pF1KB0 SFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGC
:::.: ::.:::. :.::::.::::. : :: ::.:::.:..::: ::.. : . .:
XP_011 HFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSC
480 490 500 510 520 530
1010 1020 1030 1040 1050 1060
pF1KB0 SEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNP
:::.::...::::.: .::::::: . ::. ...: ::::.:: ::..: .. .:.
XP_011 SEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQ
540 550 560 570 580 590
1070 1080 1090 1100 1110 1120
pF1KB0 WCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDP
::::::.: ::.:::.:.:.:. :...: .. . :: . .::.::: .:.: ..:.
XP_011 WCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLT-
600 610 620 630 640 650
1130 1140 1150 1160 1170 1180
pF1KB0 QEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAF
. ::::. .::.:.:::.:.::..::.:..::::::::::.::.: :. ::.: :: .
XP_011 RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHY
660 670 680 690 700 710
1190 1200 1210 1220
pF1KB0 FKVS---DP--TKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
.:.. :: :. :. . : :
XP_011 YKAKELEDPHAKKMPKKIGKTREELG
720 730 740
1220 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 11:43:22 2016 done: Thu Nov 3 11:43:24 2016
Total Scan time: 16.630 Total Display time: 0.520
Function used was FASTA [36.3.4 Apr, 2011]