Result of FASTA (ccds) for
pF1KB0401
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0401, 171 aa
1>>>pF1KB0401 171 - 171 aa - 171 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5745+/-0.000942; mu= 11.4537+/- 0.057
mean_var=85.0667+/-17.146, 0's: 0 Z-trim(106.4): 80 B-trim: 4 in 1/48
Lambda= 0.139058
statistics sampled from 8860 (8945) to 8860 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.275), width: 16
Scan time: 1.360
The best scores are: opt bits E(32554)
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 ( 171) 1136 237.4 3.3e-63
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 ( 177) 1136 237.4 3.4e-63
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 ( 172) 1108 231.8 1.6e-61
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 ( 172) 1072 224.5 2.4e-59
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 ( 166) 634 136.7 6.7e-33
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 ( 173) 615 132.9 9.7e-32
CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 ( 169) 610 131.9 1.9e-31
CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 ( 175) 559 121.6 2.4e-28
CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 ( 226) 492 108.3 3.2e-24
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 401 89.9 7.2e-19
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 401 89.9 7.2e-19
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 401 89.9 7.2e-19
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 378 85.3 1.8e-17
CCDS13277.1 MYL9 gene_id:10398|Hs108|chr20 ( 118) 360 81.6 1.8e-16
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX ( 172) 291 67.9 3.6e-12
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 ( 172) 282 66.1 1.2e-11
CCDS10226.2 CALML4 gene_id:91860|Hs108|chr15 ( 196) 276 64.9 3.2e-11
>>CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 (171 aa)
initn: 1136 init1: 1136 opt: 1136 Z-score: 1248.3 bits: 237.4 E(32554): 3.3e-63
Smith-Waterman score: 1136; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:1-171)
10 20 30 40 50 60
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 GKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQED
70 80 90 100 110 120
130 140 150 160 170
pF1KB0 YLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
130 140 150 160 170
>>CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 (177 aa)
initn: 1136 init1: 1136 opt: 1136 Z-score: 1248.1 bits: 237.4 E(32554): 3.4e-63
Smith-Waterman score: 1136; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:7-177)
10 20 30 40 50
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MDLTTTMSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 DMLASLGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 DMLASLGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEAT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 GTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 GTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
130 140 150 160 170
>>CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 (172 aa)
initn: 1077 init1: 1077 opt: 1108 Z-score: 1217.9 bits: 231.8 E(32554): 1.6e-61
Smith-Waterman score: 1108; 97.7% identity (98.8% similar) in 172 aa overlap (1-171:1-172)
10 20 30 40 50
pF1KB0 MSSKRTKTKT-KKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
::::..:::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 LGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LGKNPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
130 140 150 160 170
>>CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 (172 aa)
initn: 1042 init1: 1042 opt: 1072 Z-score: 1178.8 bits: 224.5 E(32554): 2.4e-59
Smith-Waterman score: 1072; 93.0% identity (98.8% similar) in 172 aa overlap (1-171:1-172)
10 20 30 40 50
pF1KB0 MSSKRTKTKT-KKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
:::::.:.:: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 LGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
::::::::::..::.:::::::::::::::::::::::::::::::::::::::.: :.:
CCDS13 LGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
:.:::::::::::::::::::.::::::::::::::.:::::::::::::::
CCDS13 DHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
130 140 150 160 170
>>CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 (166 aa)
initn: 627 init1: 388 opt: 634 Z-score: 704.2 bits: 136.7 E(32554): 6.7e-33
Smith-Waterman score: 634; 57.7% identity (84.7% similar) in 163 aa overlap (9-170:5-166)
10 20 30 40 50 60
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
:.::: :.::::.::.:.:::::::::...::::::::::.::.: .:.:
CCDS31 MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAAL
10 20 30 40 50
70 80 90 100 110
pF1KB0 GK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
:. : .: .: :..:::::::::.:::::::::.:.:::..: ::: :: :. :...
CCDS31 GRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
::.::.:::...::. ::::... : : ::..: ....:. :: ..::
CCDS31 DYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHG-EEKD
120 130 140 150 160
>>CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 (173 aa)
initn: 586 init1: 341 opt: 615 Z-score: 683.3 bits: 132.9 E(32554): 9.7e-32
Smith-Waterman score: 615; 53.8% identity (80.3% similar) in 173 aa overlap (1-170:1-173)
10 20 30 40 50
pF1KB0 MSSKRTKTKTKK--RPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA
:.:..:: : : :::.::::. :.:.:::::::::...:::::::::::::.: :
CCDS43 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 SLGK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTI
:::: : :. ::::..:: :::::::::..:::::.::: :..: ::: .: .. : :
CCDS43 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 QEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
...:...:: ...:..: ::::.... : :: ::..: .. .. :: . ..
CCDS43 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE
130 140 150 160 170
>>CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16 (169 aa)
initn: 584 init1: 369 opt: 610 Z-score: 678.0 bits: 131.9 E(32554): 1.9e-31
Smith-Waterman score: 610; 55.8% identity (80.8% similar) in 172 aa overlap (1-170:1-169)
10 20 30 40 50 60
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
:. ::.: .: . ..:.::.::::.:::::::::..:::::::.::::::.: .:..
CCDS10 MAPKRAKRRTV---EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAM
10 20 30 40 50
70 80 90 100 110
pF1KB0 GK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
:. : .: :::::.:: ::::::.:::::::::.:.:::::: .:: .: :. :::..
CCDS10 GRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKDD
.:.:::::. :::..::. ... : : :: .: .. .. :: :::..
CCDS10 KFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE
120 130 140 150 160
>>CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7 (175 aa)
initn: 570 init1: 338 opt: 559 Z-score: 622.5 bits: 121.6 E(32554): 2.4e-28
Smith-Waterman score: 559; 48.6% identity (78.3% similar) in 175 aa overlap (1-170:1-175)
10 20 30 40 50
pF1KB0 MSSKRTKTKTK----KRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDM
:.:... :. : :. ::..::::.::.:.:::::::::. :::::::.: : ::..
CCDS54 MASRKAGTRGKVAATKQAQRGSSNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRET
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 LASLGK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATG
..::: . .: ::::..:. ::::::.:::.:::::::::::..: .:: :: . :
CCDS54 YSQLGKVSVPEEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 TIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
....: ...:: :..:.:. ::.... .:.: ::..: . :. :: . ..
CCDS54 VVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE
130 140 150 160 170
>>CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7 (226 aa)
initn: 485 init1: 359 opt: 492 Z-score: 548.3 bits: 108.3 E(32554): 3.2e-24
Smith-Waterman score: 532; 46.5% identity (67.7% similar) in 198 aa overlap (9-170:30-226)
10 20 30
pF1KB0 MSSKRTKTKTKKRPQ-RATSNVFAMFDQSQIQEFKE---
...:: . :.::::.::::::::::::
CCDS34 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
10 20 30 40 50 60
40 50 60
pF1KB0 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
::...:::::::::::::.: .:.::. :
CCDS34 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
70 80 90 100 110 120
70 80 90 100 110 120
pF1KB0 PTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLR
.: :.::..:::::::::.:::::::::.:::::..: .:: :: :. : .. : ..
CCDS34 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
130 140 150 160 170 180
130 140 150 160 170
pF1KB0 ELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
: : :..:::..::: ... : : ::..: .. .. :: ..::
CCDS34 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD
190 200 210 220
>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa)
initn: 421 init1: 246 opt: 401 Z-score: 452.2 bits: 89.9 E(32554): 7.2e-19
Smith-Waterman score: 401; 45.2% identity (73.3% similar) in 146 aa overlap (24-162:1-146)
10 20 30 40 50
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQ---SQIQEFKEAFNMIDQNRDGFIDKEDLHDML
: :: :: ::::::...:.. :: : ..: ..
CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM
10 20 30
60 70 80 90 100 110
pF1KB0 ASLGKNPTDEYLDAMMNEAP----GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEA
:::.:::. :. :.::. : :.: ::::...:.. :: :. ::.:: ::...
CCDS98 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG
40 50 60 70 80 90
120 130 140 150 160 170
pF1KB0 TGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
.: :. ::...:..:...:::::::. ::: :: :. :: ::....
CCDS98 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
100 110 120 130 140
171 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:49:40 2016 done: Sat Nov 5 11:49:41 2016
Total Scan time: 1.360 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]