Result of FASTA (omim) for
pF1KB0415
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0415, 468 aa
1>>>pF1KB0415 468 - 468 aa - 468 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8114+/-0.000326; mu= 11.9924+/- 0.020
mean_var=137.4255+/-27.817, 0's: 0 Z-trim(119.8): 100 B-trim: 713 in 1/60
Lambda= 0.109406
statistics sampled from 34132 (34281) to 34132 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.402), width: 16
Scan time: 9.880
The best scores are: opt bits E(85289)
NP_000556 (OMIM: 147880,614689,614752) interleukin ( 468) 3235 522.0 1.4e-147
XP_016856689 (OMIM: 147880,614689,614752) PREDICTE ( 501) 2471 401.4 2.9e-111
NP_852004 (OMIM: 147880,614689,614752) interleukin ( 365) 2467 400.7 3.5e-111
NP_001193795 (OMIM: 147880,614689,614752) interleu ( 352) 2230 363.3 6.2e-100
XP_006711362 (OMIM: 147880,614689,614752) PREDICTE ( 381) 2218 361.4 2.5e-99
XP_006711361 (OMIM: 147880,614689,614752) PREDICTE ( 484) 2219 361.6 2.6e-99
XP_016856688 (OMIM: 147880,614689,614752) PREDICTE ( 517) 2218 361.5 3.1e-99
XP_005245197 (OMIM: 147880,614689,614752) PREDICTE ( 338) 1866 305.8 1.2e-82
XP_005245196 (OMIM: 147880,614689,614752) PREDICTE ( 360) 1866 305.8 1.3e-82
XP_016856690 (OMIM: 147880,614689,614752) PREDICTE ( 371) 1866 305.8 1.3e-82
NP_001136256 (OMIM: 600939,614188) interleukin-11 ( 422) 506 91.2 5.9e-18
XP_016869752 (OMIM: 118946) PREDICTED: ciliary neu ( 372) 372 70.0 1.2e-11
NP_001193940 (OMIM: 118946) ciliary neurotrophic f ( 372) 372 70.0 1.2e-11
NP_001833 (OMIM: 118946) ciliary neurotrophic fact ( 372) 372 70.0 1.2e-11
NP_671693 (OMIM: 118946) ciliary neurotrophic fact ( 372) 372 70.0 1.2e-11
XP_016869754 (OMIM: 118946) PREDICTED: ciliary neu ( 372) 372 70.0 1.2e-11
XP_016869753 (OMIM: 118946) PREDICTED: ciliary neu ( 372) 372 70.0 1.2e-11
XP_016869750 (OMIM: 118946) PREDICTED: ciliary neu ( 439) 372 70.1 1.4e-11
XP_016869749 (OMIM: 118946) PREDICTED: ciliary neu ( 439) 372 70.1 1.4e-11
XP_016869751 (OMIM: 118946) PREDICTED: ciliary neu ( 439) 372 70.1 1.4e-11
XP_011526726 (OMIM: 272430,604237) PREDICTED: cyto ( 404) 287 56.6 1.4e-07
XP_011526725 (OMIM: 272430,604237) PREDICTED: cyto ( 419) 287 56.6 1.5e-07
NP_004741 (OMIM: 272430,604237) cytokine receptor- ( 422) 287 56.6 1.5e-07
XP_011526724 (OMIM: 272430,604237) PREDICTED: cyto ( 423) 287 56.6 1.5e-07
NP_786943 (OMIM: 600694) interleukin-6 receptor su ( 329) 218 45.7 0.00024
NP_001177910 (OMIM: 600694) interleukin-6 receptor ( 857) 222 46.6 0.00031
NP_002175 (OMIM: 600694) interleukin-6 receptor su ( 918) 222 46.7 0.00033
XP_011525921 (OMIM: 605816) PREDICTED: interleukin ( 229) 212 44.6 0.00035
NP_005746 (OMIM: 605816) interleukin-27 subunit be ( 229) 212 44.6 0.00035
NP_001191247 (OMIM: 176761,615554,615555) prolacti ( 268) 209 44.2 0.00054
NP_001191246 (OMIM: 176761,615554,615555) prolacti ( 288) 209 44.2 0.00057
XP_016865135 (OMIM: 176761,615554,615555) PREDICTE ( 309) 209 44.2 0.0006
NP_001191244 (OMIM: 176761,615554,615555) prolacti ( 349) 209 44.3 0.00066
NP_001191245 (OMIM: 176761,615554,615555) prolacti ( 376) 209 44.3 0.0007
NP_000940 (OMIM: 176761,615554,615555) prolactin r ( 622) 209 44.5 0.001
XP_011512370 (OMIM: 176761,615554,615555) PREDICTE ( 622) 209 44.5 0.001
XP_006714547 (OMIM: 176761,615554,615555) PREDICTE ( 622) 209 44.5 0.001
XP_011512371 (OMIM: 176761,615554,615555) PREDICTE ( 622) 209 44.5 0.001
XP_016856693 (OMIM: 601642) PREDICTED: interleukin ( 498) 202 43.3 0.0018
NP_001245145 (OMIM: 601642) interleukin-12 recepto ( 635) 202 43.4 0.0022
NP_001306162 (OMIM: 601642) interleukin-12 recepto ( 659) 202 43.4 0.0023
XP_016856692 (OMIM: 601642) PREDICTED: interleukin ( 659) 202 43.4 0.0023
NP_001245143 (OMIM: 601642) interleukin-12 recepto ( 659) 202 43.4 0.0023
XP_016856691 (OMIM: 601642) PREDICTED: interleukin ( 700) 202 43.4 0.0024
XP_006710680 (OMIM: 601642) PREDICTED: interleukin ( 776) 202 43.5 0.0026
NP_001245144 (OMIM: 601642) interleukin-12 recepto ( 776) 202 43.5 0.0026
XP_011539686 (OMIM: 601642) PREDICTED: interleukin ( 809) 202 43.5 0.0027
XP_005270884 (OMIM: 601642) PREDICTED: interleukin ( 862) 202 43.5 0.0028
XP_005270882 (OMIM: 601642) PREDICTED: interleukin ( 862) 202 43.5 0.0028
XP_011539685 (OMIM: 601642) PREDICTED: interleukin ( 862) 202 43.5 0.0028
>>NP_000556 (OMIM: 147880,614689,614752) interleukin-6 r (468 aa)
initn: 3235 init1: 3235 opt: 3235 Z-score: 2770.7 bits: 522.0 E(85289): 1.4e-147
Smith-Waterman score: 3235; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQDSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQDSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 SVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRP
370 380 390 400 410 420
430 440 450 460
pF1KB0 TPVLVPLISPPVSPSSLGSDNTSSHNRPDARDPRSPYDISNTDYFFPR
::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TPVLVPLISPPVSPSSLGSDNTSSHNRPDARDPRSPYDISNTDYFFPR
430 440 450 460
>>XP_016856689 (OMIM: 147880,614689,614752) PREDICTED: i (501 aa)
initn: 2471 init1: 2471 opt: 2471 Z-score: 2118.6 bits: 401.4 E(85289): 2.9e-111
Smith-Waterman score: 3155; 93.2% identity (93.4% similar) in 501 aa overlap (1-468:1-501)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
250 260 270 280 290 300
310 320 330 340 350
pF1KB0 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLP-----
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPGTAIK
310 320 330 340 350 360
360 370 380
pF1KB0 ----------------------------VQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLR
.:::::::::::::::::::::::::::::::
XP_016 EVPKAFRLLYPLCALWEQVECHQKSHSEMQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLR
370 380 390 400 410 420
390 400 410 420 430 440
pF1KB0 FKKTWKLRALKEGKTSMHPPYSLGQLVPERPRPTPVLVPLISPPVSPSSLGSDNTSSHNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FKKTWKLRALKEGKTSMHPPYSLGQLVPERPRPTPVLVPLISPPVSPSSLGSDNTSSHNR
430 440 450 460 470 480
450 460
pF1KB0 PDARDPRSPYDISNTDYFFPR
:::::::::::::::::::::
XP_016 PDARDPRSPYDISNTDYFFPR
490 500
>>NP_852004 (OMIM: 147880,614689,614752) interleukin-6 r (365 aa)
initn: 2467 init1: 2467 opt: 2467 Z-score: 2117.0 bits: 400.7 E(85289): 3.5e-111
Smith-Waterman score: 2467; 100.0% identity (100.0% similar) in 355 aa overlap (1-355:1-355)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQDSS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPGSRRR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 SVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRP
NP_852 GSCGL
>>NP_001193795 (OMIM: 147880,614689,614752) interleukin- (352 aa)
initn: 2230 init1: 2230 opt: 2230 Z-score: 1915.1 bits: 363.3 E(85289): 6.2e-100
Smith-Waterman score: 2230; 99.1% identity (99.4% similar) in 321 aa overlap (1-321:1-321)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 GEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQDSS
::::::::::::::::. ::
NP_001 GEWSEWSPEAMGTPWTDRLSPRCPGWSTAVQSQLTATSASWVQAILPPQPPK
310 320 330 340 350
>>XP_006711362 (OMIM: 147880,614689,614752) PREDICTED: i (381 aa)
initn: 2453 init1: 2217 opt: 2218 Z-score: 1904.4 bits: 361.4 E(85289): 2.5e-99
Smith-Waterman score: 2425; 95.7% identity (95.7% similar) in 371 aa overlap (1-355:1-371)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
250 260 270 280 290 300
310 320 330 340
pF1KB0 GEWSEWSPEAMGTPWT----------------ESRSPPAENEVSTPMQALTTNKDDDNIL
:::::::::::::::: ::::::::::::::::::::::::::::
XP_006 GEWSEWSPEAMGTPWTGFSPQTIPGGIWDPAGESRSPPAENEVSTPMQALTTNKDDDNIL
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB0 FRDSANATSLPVQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSM
:::::::::::
XP_006 FRDSANATSLPGSRRRGSCGL
370 380
>>XP_006711361 (OMIM: 147880,614689,614752) PREDICTED: i (484 aa)
initn: 3221 init1: 2217 opt: 2219 Z-score: 1903.8 bits: 361.6 E(85289): 2.6e-99
Smith-Waterman score: 3193; 96.7% identity (96.7% similar) in 484 aa overlap (1-468:1-484)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
250 260 270 280 290 300
310 320 330 340
pF1KB0 GEWSEWSPEAMGTPWT----------------ESRSPPAENEVSTPMQALTTNKDDDNIL
:::::::::::::::: ::::::::::::::::::::::::::::
XP_006 GEWSEWSPEAMGTPWTGFSPQTIPGGIWDPAGESRSPPAENEVSTPMQALTTNKDDDNIL
310 320 330 340 350 360
350 360 370 380 390 400
pF1KB0 FRDSANATSLPVQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FRDSANATSLPVQDSSSVPLPTFLVAGGSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSM
370 380 390 400 410 420
410 420 430 440 450 460
pF1KB0 HPPYSLGQLVPERPRPTPVLVPLISPPVSPSSLGSDNTSSHNRPDARDPRSPYDISNTDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HPPYSLGQLVPERPRPTPVLVPLISPPVSPSSLGSDNTSSHNRPDARDPRSPYDISNTDY
430 440 450 460 470 480
pF1KB0 FFPR
::::
XP_006 FFPR
>>XP_016856688 (OMIM: 147880,614689,614752) PREDICTED: i (517 aa)
initn: 2967 init1: 2217 opt: 2218 Z-score: 1902.6 bits: 361.5 E(85289): 3.1e-99
Smith-Waterman score: 2986; 90.0% identity (90.2% similar) in 500 aa overlap (1-451:1-500)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQ
250 260 270 280 290 300
310 320 330 340
pF1KB0 GEWSEWSPEAMGTPWT----------------ESRSPPAENEVSTPMQALTTNKDDDNIL
:::::::::::::::: ::::::::::::::::::::::::::::
XP_016 GEWSEWSPEAMGTPWTGFSPQTIPGGIWDPAGESRSPPAENEVSTPMQALTTNKDDDNIL
310 320 330 340 350 360
350 360 370
pF1KB0 FRDSANATSLP---------------------------------VQDSSSVPLPTFLVAG
::::::::::: .:::::::::::::::
XP_016 FRDSANATSLPGTAIKEVPKAFRLLYPLCALWEQVECHQKSHSEMQDSSSVPLPTFLVAG
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB0 GSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRPTPVLVPLISPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSLAFGTLLCIAIVLRFKKTWKLRALKEGKTSMHPPYSLGQLVPERPRPTPVLVPLISPP
430 440 450 460 470 480
440 450 460
pF1KB0 VSPSSLGSDNTSSHNRPDARDPRSPYDISNTDYFFPR
::::::::::::::::::::
XP_016 VSPSSLGSDNTSSHNRPDARDPRSPYDISNTDYFFPR
490 500 510
>>XP_005245197 (OMIM: 147880,614689,614752) PREDICTED: i (338 aa)
initn: 1886 init1: 1863 opt: 1866 Z-score: 1604.8 bits: 305.8 E(85289): 1.2e-82
Smith-Waterman score: 1866; 97.1% identity (98.2% similar) in 280 aa overlap (1-277:1-280)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWM---VKDLQHHCVIHDAWSGLRHVVQLRAQEE
::::::::::::::::::::::::::::: : .:. .:
XP_005 PHSWNSSFYRLRFELRYRAERSKTFTTWMNPGVLQLRTRCPPPCRHLLLIKTMIIFSSEI
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB0 FGQGEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQ
XP_005 LQMRQASQCKILLQYHCPHSWLLEGAWPSERSSALPLF
310 320 330
>>XP_005245196 (OMIM: 147880,614689,614752) PREDICTED: i (360 aa)
initn: 1863 init1: 1863 opt: 1866 Z-score: 1604.4 bits: 305.8 E(85289): 1.3e-82
Smith-Waterman score: 1866; 97.1% identity (98.2% similar) in 280 aa overlap (1-277:1-280)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWM---VKDLQHHCVIHDAWSGLRHVVQLRAQEE
::::::::::::::::::::::::::::: : .:. .:
XP_005 PHSWNSSFYRLRFELRYRAERSKTFTTWMNPGVLQLRTRCPPPCRHLLLIKTMIIFSSEI
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB0 FGQGEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQ
XP_005 LQMRQASQVQEDVEAAGSEGRQDKHASAVLFGAAGPGEASTHPSACSSHLPTGVPQQPGV
310 320 330 340 350 360
>>XP_016856690 (OMIM: 147880,614689,614752) PREDICTED: i (371 aa)
initn: 1886 init1: 1863 opt: 1866 Z-score: 1604.3 bits: 305.8 E(85289): 1.3e-82
Smith-Waterman score: 1866; 97.1% identity (98.2% similar) in 280 aa overlap (1-277:1-280)
10 20 30 40 50 60
pF1KB0 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAVGCALLAALLAAPGAALAPRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYRAGRPAGTVHLLVDVPPEEPQLS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQD
190 200 210 220 230 240
250 260 270 280 290
pF1KB0 PHSWNSSFYRLRFELRYRAERSKTFTTWM---VKDLQHHCVIHDAWSGLRHVVQLRAQEE
::::::::::::::::::::::::::::: : .:. .:
XP_016 PHSWNSSFYRLRFELRYRAERSKTFTTWMNPGVLQLRTRCPPPCRHLLLIKTMIIFSSEI
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB0 FGQGEWSEWSPEAMGTPWTESRSPPAENEVSTPMQALTTNKDDDNILFRDSANATSLPVQ
XP_016 LQMRQASQELPSRRSPKPSVCCTLFVPCGSRWNVTRKATLKCKILLQYHCPHSWLLEGAW
310 320 330 340 350 360
468 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:48:02 2016 done: Sat Nov 5 16:48:03 2016
Total Scan time: 9.880 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]