Result of FASTA (omim) for
pF1KB0485
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0485, 528 aa
1>>>pF1KB0485 528 - 528 aa - 528 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9809+/-0.000354; mu= 16.1146+/- 0.022
mean_var=101.5351+/-21.004, 0's: 0 Z-trim(115.9): 81 B-trim: 466 in 1/53
Lambda= 0.127282
statistics sampled from 26671 (26757) to 26671 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.674), E-opt: 0.2 (0.314), width: 16
Scan time: 10.350
The best scores are: opt bits E(85289)
NP_114427 (OMIM: 612583) protein spinster homolog ( 528) 3504 654.2 2.8e-187
NP_001135920 (OMIM: 612583) protein spinster homol ( 528) 3504 654.2 2.8e-187
XP_016879248 (OMIM: 612583) PREDICTED: protein spi ( 573) 3504 654.2 3e-187
XP_016879247 (OMIM: 612583) PREDICTED: protein spi ( 578) 3484 650.5 3.8e-186
NP_001135922 (OMIM: 612583) protein spinster homol ( 455) 3004 562.3 1.1e-159
XP_016879246 (OMIM: 612583) PREDICTED: protein spi ( 591) 2908 544.8 2.7e-154
NP_001135923 (OMIM: 612583) protein spinster homol ( 476) 1829 346.6 1e-94
XP_006721159 (OMIM: 612583) PREDICTED: protein spi ( 521) 1829 346.6 1.1e-94
NP_001118230 (OMIM: 612584) protein spinster homol ( 549) 1692 321.5 4.2e-87
NP_872344 (OMIM: 611701) protein spinster homolog ( 512) 1656 314.8 3.9e-85
NP_001135921 (OMIM: 612583) protein spinster homol ( 454) 1338 256.4 1.3e-67
XP_011522026 (OMIM: 611701) PREDICTED: protein spi ( 479) 1338 256.4 1.4e-67
XP_011522028 (OMIM: 611701) PREDICTED: protein spi ( 399) 1330 254.9 3.4e-67
NP_001307378 (OMIM: 611701) protein spinster homol ( 385) 1278 245.3 2.5e-64
XP_011522025 (OMIM: 611701) PREDICTED: protein spi ( 490) 1233 237.1 9.1e-62
XP_011522030 (OMIM: 611701) PREDICTED: protein spi ( 316) 1001 194.4 4.3e-49
XP_011522027 (OMIM: 611701) PREDICTED: protein spi ( 461) 851 167.0 1.1e-40
XP_016879834 (OMIM: 611701) PREDICTED: protein spi ( 270) 834 163.7 6.6e-40
NP_001132928 (OMIM: 611700) putative transporter S ( 492) 205 48.4 6.1e-05
XP_005250200 (OMIM: 611700) PREDICTED: putative tr ( 492) 205 48.4 6.1e-05
NP_001315604 (OMIM: 185860) synaptic vesicle glyco ( 742) 195 46.7 0.0003
NP_001315603 (OMIM: 185860) synaptic vesicle glyco ( 742) 195 46.7 0.0003
NP_055664 (OMIM: 185860) synaptic vesicle glycopro ( 742) 195 46.7 0.0003
>>NP_114427 (OMIM: 612583) protein spinster homolog 1 is (528 aa)
initn: 3504 init1: 3504 opt: 3504 Z-score: 3483.2 bits: 654.2 E(85289): 2.8e-187
Smith-Waterman score: 3504; 100.0% identity (100.0% similar) in 528 aa overlap (1-528:1-528)
10 20 30 40 50 60
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQRITGLSPGRSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQRITGLSPGRSAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 IVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 IVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 RYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVTPGLGVVAVLLLFLVVRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 ADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVTPGLGVVAVLLLFLVVRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 PPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 SRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 TGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 TGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 FQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 FQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLG
430 440 450 460 470 480
490 500 510 520
pF1KB0 TAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPVASVLI
::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 TAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPVASVLI
490 500 510 520
>>NP_001135920 (OMIM: 612583) protein spinster homolog 1 (528 aa)
initn: 3504 init1: 3504 opt: 3504 Z-score: 3483.2 bits: 654.2 E(85289): 2.8e-187
Smith-Waterman score: 3504; 100.0% identity (100.0% similar) in 528 aa overlap (1-528:1-528)
10 20 30 40 50 60
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQRITGLSPGRSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQRITGLSPGRSAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 IVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVTPGLGVVAVLLLFLVVRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVTPGLGVVAVLLLFLVVRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 SRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB0 TGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB0 FQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLG
430 440 450 460 470 480
490 500 510 520
pF1KB0 TAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPVASVLI
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPVASVLI
490 500 510 520
>>XP_016879248 (OMIM: 612583) PREDICTED: protein spinste (573 aa)
initn: 3504 init1: 3504 opt: 3504 Z-score: 3482.8 bits: 654.2 E(85289): 3e-187
Smith-Waterman score: 3504; 100.0% identity (100.0% similar) in 528 aa overlap (1-528:46-573)
10 20 30
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGS
::::::::::::::::::::::::::::::
XP_016 GLSDSKCSGLLPRVGSSVGPERGRARPPGTMAGSDTAPFLSQADDPDDGPVPGTPGLPGS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB0 TGNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFF
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB0 NIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB0 WLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVK
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB0 DMAGDWHWALRVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DMAGDWHWALRVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARN
260 270 280 290 300 310
280 290 300 310 320 330
pF1KB0 PSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIFGLITC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIFGLITC
320 330 340 350 360 370
340 350 360 370 380 390
pF1KB0 LTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFI
380 390 400 410 420 430
400 410 420 430 440 450
pF1KB0 GETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWP
440 450 460 470 480 490
460 470 480 490 500 510
pF1KB0 PSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDDRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDDRI
500 510 520 530 540 550
520
pF1KB0 VVPQRGRSTRVPVASVLI
::::::::::::::::::
XP_016 VVPQRGRSTRVPVASVLI
560 570
>>XP_016879247 (OMIM: 612583) PREDICTED: protein spinste (578 aa)
initn: 2013 init1: 2013 opt: 3484 Z-score: 3462.9 bits: 650.5 E(85289): 3.8e-186
Smith-Waterman score: 3484; 99.1% identity (99.1% similar) in 533 aa overlap (1-528:46-578)
10 20 30
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGS
::::::::::::::::::::::::::::::
XP_016 GLSDSKCSGLLPRVGSSVGPERGRARPPGTMAGSDTAPFLSQADDPDDGPVPGTPGLPGS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB0 TGNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFF
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB0 NIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB0 WLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVK
200 210 220 230 240 250
220 230 240 250 260
pF1KB0 DMAGDWHWALR-----VTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLR
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_016 DMAGDWHWALRPSVSQVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLR
260 270 280 290 300 310
270 280 290 300 310 320
pF1KB0 ALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIF
320 330 340 350 360 370
330 340 350 360 370 380
pF1KB0 GLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATY
380 390 400 410 420 430
390 400 410 420 430 440
pF1KB0 IFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRL
440 450 460 470 480 490
450 460 470 480 490 500
pF1KB0 RRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGS
500 510 520 530 540 550
510 520
pF1KB0 TDDRIVVPQRGRSTRVPVASVLI
:::::::::::::::::::::::
XP_016 TDDRIVVPQRGRSTRVPVASVLI
560 570
>>NP_001135922 (OMIM: 612583) protein spinster homolog 1 (455 aa)
initn: 3004 init1: 3004 opt: 3004 Z-score: 2987.9 bits: 562.3 E(85289): 1.1e-159
Smith-Waterman score: 3004; 100.0% identity (100.0% similar) in 455 aa overlap (74-528:1-455)
50 60 70 80 90 100
pF1KB0 QEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTV
::::::::::::::::::::::::::::::
NP_001 MDRFTVAGVLPDIEQFFNIGDSSSGLIQTV
10 20 30
110 120 130 140 150 160
pF1KB0 FISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVG
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB0 EASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVT
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB0 PGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGFTAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGFTAV
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB0 AFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEI
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB0 SRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVA
280 290 300 310 320 330
410 420 430 440 450 460
pF1KB0 DILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFS
340 350 360 370 380 390
470 480 490 500 510 520
pF1KB0 LMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPV
400 410 420 430 440 450
pF1KB0 ASVLI
:::::
NP_001 ASVLI
>>XP_016879246 (OMIM: 612583) PREDICTED: protein spinste (591 aa)
initn: 1553 init1: 1492 opt: 2908 Z-score: 2891.1 bits: 544.8 E(85289): 2.7e-154
Smith-Waterman score: 2908; 98.9% identity (98.9% similar) in 445 aa overlap (1-440:46-490)
10 20 30
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGS
::::::::::::::::::::::::::::::
XP_016 GLSDSKCSGLLPRVGSSVGPERGRARPPGTMAGSDTAPFLSQADDPDDGPVPGTPGLPGS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB0 TGNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TGNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFF
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB0 NIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB0 WLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVK
200 210 220 230 240 250
220 230 240 250 260
pF1KB0 DMAGDWHWALR-----VTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLR
::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_016 DMAGDWHWALRPSVSQVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLR
260 270 280 290 300 310
270 280 290 300 310 320
pF1KB0 ALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIF
320 330 340 350 360 370
330 340 350 360 370 380
pF1KB0 GLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATY
380 390 400 410 420 430
390 400 410 420 430 440
pF1KB0 IFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLACCTK
440 450 460 470 480 490
450 460 470 480 490 500
pF1KB0 RRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGS
XP_016 QGPQTTGLWCPSGAAPPACPWPVCSSERLPLTYLHICHSWPWAHPTKGLGLTPWPGPASR
500 510 520 530 540 550
>>NP_001135923 (OMIM: 612583) protein spinster homolog 1 (476 aa)
initn: 1826 init1: 1826 opt: 1829 Z-score: 1821.6 bits: 346.6 E(85289): 1e-94
Smith-Waterman score: 3044; 90.2% identity (90.2% similar) in 528 aa overlap (1-528:1-476)
10 20 30 40 50 60
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQRITGLSPGRSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQRITGLSPGRSAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 IVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 RYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 ADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVTPGLGVVAVLLLFLVVRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVTPGLGVVAVLLLFLVVRE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 PPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLR
::::::::::::::::::::::::::::::
NP_001 PPRGAVERHSDLPPLNPTSWWADLRALARN------------------------------
250 260 270
310 320 330 340 350 360
pF1KB0 SRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCA
::::::::::::::::::::::::::::::::::::::
NP_001 ----------------------LIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCA
280 290 300
370 380 390 400 410 420
pF1KB0 TGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEA
310 320 330 340 350 360
430 440 450 460 470 480
pF1KB0 FQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLG
370 380 390 400 410 420
490 500 510 520
pF1KB0 TAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPVASVLI
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPVASVLI
430 440 450 460 470
>>XP_006721159 (OMIM: 612583) PREDICTED: protein spinste (521 aa)
initn: 1826 init1: 1826 opt: 1829 Z-score: 1821.0 bits: 346.6 E(85289): 1.1e-94
Smith-Waterman score: 3044; 90.2% identity (90.2% similar) in 528 aa overlap (1-528:46-521)
10 20 30
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGS
::::::::::::::::::::::::::::::
XP_006 GLSDSKCSGLLPRVGSSVGPERGRARPPGTMAGSDTAPFLSQADDPDDGPVPGTPGLPGS
20 30 40 50 60 70
40 50 60 70 80 90
pF1KB0 TGNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TGNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFF
80 90 100 110 120 130
100 110 120 130 140 150
pF1KB0 NIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NIGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHF
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB0 WLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 WLLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVK
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB0 DMAGDWHWALRVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DMAGDWHWALRVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARN
260 270 280 290 300 310
280 290 300 310 320 330
pF1KB0 PSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIFGLITC
::::::::
XP_006 ----------------------------------------------------LIFGLITC
320
340 350 360 370 380 390
pF1KB0 LTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LTGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFI
330 340 350 360 370 380
400 410 420 430 440 450
pF1KB0 GETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWP
390 400 410 420 430 440
460 470 480 490 500 510
pF1KB0 PSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDDRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PSFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDDRI
450 460 470 480 490 500
520
pF1KB0 VVPQRGRSTRVPVASVLI
::::::::::::::::::
XP_006 VVPQRGRSTRVPVASVLI
510 520
>>NP_001118230 (OMIM: 612584) protein spinster homolog 2 (549 aa)
initn: 1681 init1: 805 opt: 1692 Z-score: 1684.8 bits: 321.5 E(85289): 4.2e-87
Smith-Waterman score: 1692; 54.0% identity (76.7% similar) in 498 aa overlap (2-499:53-540)
10 20 30
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGST
::... . ... :: ::::: :: .
NP_001 RRRRRRGAQRGAGGSGCCGARGAGGAGVSAAGDEVQTLSGSVRRAPTGP-PGTPGTPGCA
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB0 GNPKSEEPEVPDQEGLQRITGLSPGRSALIVAVLCYINLLNYMDRFTVAGVLPDIEQFFN
.. :. . : .: : ::.: .:.: :.:::.::.:::::: ::.: :.
NP_001 ATAKGPGAQQPKPASLGR------GRGA-AAAILSLGNVLNYLDRYTVAGVLLDIQQHFG
90 100 110 120 130
100 110 120 130 140 150
pF1KB0 IGDSSSGLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLGSSFIPGEHFW
. : ..::.:.::: :.:: ::.:::::::.::: .. :: ::: ::..::::: ..::
NP_001 VKDRGAGLLQSVFICSFMVAAPIFGYLGDRFNRKVILSCGIFFWSAVTFSSSFIPQQYFW
140 150 160 170 180 190
160 170 180 190 200 210
pF1KB0 LLLLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKD
::.:.:::::.:::::::::::.:.:::. . :. :::.::::::.:::::::.::.::.
NP_001 LLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQ
200 210 220 230 240 250
220 230 240 250 260 270
pF1KB0 MAGDWHWALRVTPGLGVVAVLLLFLVVREPPRGAVERHSDLPPLNPTSWWADLRALARNP
::::::::::.: ::... :....: :: ... .: ::: :..:: ::
NP_001 AAGDWHWALRVSPVLGMITGTLILILVPATKRGHADQLGDQLKAR-TSWLRDMKALIRNR
260 270 280 290 300 310
280 290 300 310 320 330
pF1KB0 SFVLSSLGFTAVAFVTGSLALWAPAFLLRSRVVLGETPPCLPGDSCSSSDSLIFGLITCL
:.:.:::. .::.:.::.:..: : .: :..:: . : . :...:::::: :::.
NP_001 SYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETC-NSPPCGAKDSLIFGAITCF
320 330 340 350 360 370
340 350 360 370 380 390
pF1KB0 TGVLGVGLGVEISRRLRHSNPRADPLVCATGLLGSAPFLFLSLACARGSIVATYIFIFIG
:: ::: :. .: : .. ::::::::.:.:::: :. : .. :..:::..:: ::.:
NP_001 TGFLGVVTGAGATRWCRLKTQRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYICIFVG
380 390 400 410 420 430
400 410 420 430 440 450
pF1KB0 ETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAGSPYLIGLISDRLRRNWPP
:::: ::::.::::.::::::::.:: :.: ::::::::::::::.::: .:..
NP_001 ETLLFSNWAITADILMYVVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKD
440 450 460 470 480 490
460 470 480 490 500 510
pF1KB0 SFLSEFRALQFSLMLCAFVGALGGAAFLGTAIFIEADRRRAQLHVQGLLHEAGSTDDRIV
: : :: .: ..:::: :: .::: ::.::.:. .:: ::. .:. :
NP_001 SPLWEFLSLGYALMLCPFVVVLGGMFFLATALFFVSDRARAEQQVNQLAMPPASVKV
500 510 520 530 540
520
pF1KB0 VPQRGRSTRVPVASVLI
>>NP_872344 (OMIM: 611701) protein spinster homolog 3 is (512 aa)
initn: 1398 init1: 1374 opt: 1656 Z-score: 1649.5 bits: 314.8 E(85289): 3.9e-85
Smith-Waterman score: 1656; 54.0% identity (77.7% similar) in 480 aa overlap (20-498:10-484)
10 20 30 40 50 60
pF1KB0 MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQRITGLSPGRSAL
: :: :: :.. .: . : : . .: : :. .
NP_872 MAGGMSAECPEPGPGGLQGQSPGPGRQCP--PPITPTSW--SLPPWRAYV
10 20 30 40
70 80 90 100 110 120
pF1KB0 IVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGD
.::::::::::::. : .:::: ::.. :.:.:. .::.::::.: .. :::::::::
NP_872 AAAVLCYINLLNYMNWFIIAGVLLDIQEVFQISDNHAGLLQTVFVSCLLLSAPVFGYLGD
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB0 RYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
:..:: : :: .:: . :.:::: .. ::..:.::.::.: :::::::::...::::
NP_872 RHSRKATMSFGILLWSGAGLSSSFISPRYSWLFFLSRGIVGTGSASYSTIAPTVLGDLFV
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB0 ADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVTPGLGVVAVLLLFLVVRE
:::.:.:..::. :::::::::. :: : ..:.:.::::: : : .::..::.:.: .
NP_872 RDQRTRVLAVFYIFIPVGSGLGYVLGSAVTMLTGNWRWALRVMPCLEAVALILLILLVPD
170 180 190 200 210 220
250 260 270 280 290
pF1KB0 PPRGAVERHSDLPPLN-PTSWWADLRALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLL
:::::.: ... . .:: :.: :..: ::: :.:: ::.:::::.:..::: :::
NP_872 PPRGAAETQGEGAVGGFRSSWCEDVRYLGKNWSFVWSTLGVTAMAFVTGALGFWAPKFLL
230 240 250 260 270 280
300 310 320 330 340 350
pF1KB0 RSRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVC
..::: : :::. . ::. :::::: .: .:::.:: ::.: .:: .. : :.::.:
NP_872 EARVVHGLQPPCFQ-EPCSNPDSLIFGALTIMTGVIGVILGAEAARRYKKVIPGAEPLIC
290 300 310 320 330 340
360 370 380 390 400 410
pF1KB0 ATGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAE
:..::..:: :.:.:. : ...:.:.:. .:: ::: :::.:::::: ::.: :.:::
NP_872 ASSLLATAPCLYLALVLAPTTLLASYVFLGLGELLLSCNWAVVADILLSVVVPRCRGTAE
350 360 370 380 390 400
420 430 440 450 460 470
pF1KB0 AFQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFL
:.::...:.::::::::: ::::. :: : :.:..::.:: :.. :::: ::::. ::
NP_872 ALQITVGHILGDAGSPYLTGLISSVLRARRPDSYLQRFRSLQQSFLCCAFVIALGGGCFL
410 420 430 440 450 460
480 490 500 510 520
pF1KB0 GTAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPVASVLI
::...: :. :: : :
NP_872 LTALYLERDETRAWQPVTGTPDSNDVDSNDLERQGLLSGAGASTEEP
470 480 490 500 510
528 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 11:55:21 2016 done: Sat Nov 5 11:55:22 2016
Total Scan time: 10.350 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]