Result of FASTA (ccds) for
pF1KB0916
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0916, 328 aa
1>>>pF1KB0916 328 - 328 aa - 328 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9804+/-0.000639; mu= 15.2783+/- 0.039
mean_var=120.6111+/-24.412, 0's: 0 Z-trim(115.4): 29 B-trim: 0 in 0/52
Lambda= 0.116783
statistics sampled from 15896 (15925) to 15896 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.489), width: 16
Scan time: 3.140
The best scores are: opt bits E(32554)
CCDS59489.1 POU5F2 gene_id:134187|Hs108|chr5 ( 328) 2323 401.6 4.6e-112
CCDS34391.1 POU5F1 gene_id:5460|Hs108|chr6 ( 360) 680 124.8 1.1e-28
CCDS55274.1 POU5F1B gene_id:5462|Hs108|chr8 ( 359) 655 120.6 2e-27
CCDS47398.2 POU5F1 gene_id:5460|Hs108|chr6 ( 190) 536 100.2 1.4e-21
CCDS14450.1 POU3F4 gene_id:5456|Hs108|chrX ( 361) 490 92.8 4.6e-19
CCDS30679.1 POU3F1 gene_id:5453|Hs108|chr1 ( 451) 488 92.5 6.8e-19
CCDS33265.1 POU3F3 gene_id:5455|Hs108|chr2 ( 500) 482 91.6 1.5e-18
CCDS5040.1 POU3F2 gene_id:5454|Hs108|chr6 ( 443) 476 90.5 2.7e-18
CCDS8431.1 POU2F3 gene_id:25833|Hs108|chr11 ( 436) 429 82.6 6.5e-16
CCDS58190.1 POU2F3 gene_id:25833|Hs108|chr11 ( 438) 429 82.6 6.5e-16
CCDS75420.1 POU5F1 gene_id:5460|Hs108|chr6 ( 164) 408 78.6 3.8e-15
CCDS55655.1 POU2F1 gene_id:5451|Hs108|chr1 ( 703) 400 77.9 2.7e-14
CCDS55656.1 POU2F1 gene_id:5451|Hs108|chr1 ( 755) 400 77.9 2.8e-14
CCDS1259.2 POU2F1 gene_id:5451|Hs108|chr1 ( 766) 400 77.9 2.8e-14
CCDS2919.1 POU1F1 gene_id:5449|Hs108|chr3 ( 291) 354 69.8 3.1e-12
CCDS46873.1 POU1F1 gene_id:5449|Hs108|chr3 ( 317) 354 69.8 3.3e-12
CCDS31803.1 POU6F1 gene_id:5463|Hs108|chr12 ( 301) 350 69.1 5.1e-12
CCDS56094.1 POU2F2 gene_id:5452|Hs108|chr19 ( 467) 352 69.6 5.5e-12
CCDS56095.1 POU2F2 gene_id:5452|Hs108|chr19 ( 479) 352 69.6 5.6e-12
CCDS81691.1 POU6F1 gene_id:5463|Hs108|chr12 ( 611) 350 69.4 8.3e-12
CCDS31996.1 POU4F1 gene_id:5457|Hs108|chr13 ( 419) 347 68.7 9.1e-12
CCDS34074.1 POU4F2 gene_id:5458|Hs108|chr4 ( 409) 338 67.2 2.6e-11
CCDS4281.1 POU4F3 gene_id:5459|Hs108|chr5 ( 338) 336 66.8 2.8e-11
>>CCDS59489.1 POU5F2 gene_id:134187|Hs108|chr5 (328 aa)
initn: 2323 init1: 2323 opt: 2323 Z-score: 2125.3 bits: 401.6 E(32554): 4.6e-112
Smith-Waterman score: 2323; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328)
10 20 30 40 50 60
pF1KB0 MAGHRPSNHFCPLPGSGGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MAGHRPSNHFCPLPGSGGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 WRIPLGPLPHEFRGWIAPCRPRLGASEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 WRIPLGPLPHEFRGWIAPCRPRLGASEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDIS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GILKELQQLAKELRQKRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GILKELQQLAKELRQKRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 RPLLKKWLKEVEAENLLGLCKMEMILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RPLLKKWLKEVEAENLLGLCKMEMILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 SHIAGCLQLQKDVVRVWFYNRSKMGSRPTNDASPREIVGTAGPPCPGAPVCFHLGLGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SHIAGCLQLQKDVVRVWFYNRSKMGSRPTNDASPREIVGTAGPPCPGAPVCFHLGLGLPV
250 260 270 280 290 300
310 320
pF1KB0 DIPHYTRLYSAGVAHSSAPATTLGLLRF
::::::::::::::::::::::::::::
CCDS59 DIPHYTRLYSAGVAHSSAPATTLGLLRF
310 320
>>CCDS34391.1 POU5F1 gene_id:5460|Hs108|chr6 (360 aa)
initn: 925 init1: 619 opt: 680 Z-score: 628.8 bits: 124.8 E(32554): 1.1e-28
Smith-Waterman score: 945; 47.6% identity (64.9% similar) in 359 aa overlap (1-324:1-354)
10 20 30 40 50
pF1KB0 MAGHRPSNH-FCPLPGSGGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPD
:::: :. : : ::.:: :: :: : :: :::: :. :: :.. ::. :: .
CCDS34 MAGHLASDFAFSPPPGGGGDGPGGPEPGWVDPRTWLSFQGPPGG----PGIGPGVGPGSE
10 20 30 40 50
60 70 80 90 100
pF1KB0 VWRIPLGPLPHEFRGWIAPCRPRLGAS--------------EAGDWLRRPSEGALPGPYI
:: :: : :.:: : .: : :..:.. ::: .. :.:: : :
CCDS34 VWGIPPCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCT
60 70 80 90 100 110
110 120 130 140 150
pF1KB0 ALRSIPKLPP------PE---DISGILKELQQLAKELRQKRLSLGYSQADVGIAVGALFG
. . :: :: ::... :::.:.:: :.:::..:::.:::::...:.:::
CCDS34 VTPGAVKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFG
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB0 KVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEA-ENLLGLCKMEMILQQSGKWRRA
::.:::::::::: ::: :: ::::::.::..:.. ::: .:: : ..: : .:.
CCDS34 KVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQAR-KRKRT
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB0 SRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVRVWFYNRSKMGSRPTNDASPR
: : :. ..::..: .::::: ::::::: : :.:::::::: :: . :.: ..: . :
CCDS34 SIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQR
240 250 260 270 280 290
280 290 300 310 320
pF1KB0 EIVGTAGPPCPGAPVCFHLG----LGLP-VDIPHYTRLYSA-----GVAHSSAPATTLGL
: .:: : :.:: : :. .: : ::.: :::. : : . .::::
CCDS34 EDFEAAGSPFSGGPVSFPLAPGPHFGTPGYGSPHFTALYSSVPFPEGEAFPPVSVTTLGS
300 310 320 330 340 350
pF1KB0 LRF
CCDS34 PMHSN
360
>>CCDS55274.1 POU5F1B gene_id:5462|Hs108|chr8 (359 aa)
initn: 775 init1: 422 opt: 655 Z-score: 606.0 bits: 120.6 E(32554): 2e-27
Smith-Waterman score: 895; 47.8% identity (65.1% similar) in 341 aa overlap (1-311:1-335)
10 20 30 40 50
pF1KB0 MAGHRPSNH-FCPLPGSGGGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPD
:::: :. : : ::.:: :: : : :: ::::: :. :: :.. ::. :: .
CCDS55 MAGHLASDFAFSPPPGGGGDGPWGAEPGWVDPLTWLSFQGPPGG----PGIGPGVGPGSE
10 20 30 40 50
60 70 80 90 100
pF1KB0 VWRIPLGPLPHEFRGWIAPCRPRLGA--------------SEAGDWLRRPSEGALPGPYI
:: :: : :.:. : .: : :..:. :::: .. :.:: : :
CCDS55 VWGIPPCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCT
60 70 80 90 100 110
110 120 130 140 150
pF1KB0 ALRSIPKLPP------PE---DISGILKELQQLAKELRQKRLSLGYSQADVGIAVGALFG
. . :: :: ::... :::.:.:: :.:::..:::.:::::. .:.:::
CCDS55 VPPGAVKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFG
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB0 KVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEA-ENLLGLCKMEMILQQSGKWRRA
::.:: ::::::: ::: :: ::::::.::..:.. ::: .:: : :.:. : .:.
CCDS55 KVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAET-LMQARKRKRT
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB0 SRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVRVWFYNRSKMGSRPTNDASPR
: : :. ..::..: .::::: :::::: : :.:::::::: :: . :.: ..: . :
CCDS55 SIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQR
240 250 260 270 280 290
280 290 300 310 320
pF1KB0 EIVGTAGPPCPGAPVCFHLG----LGLP-VDIPHYTRLYSAGVAHSSAPATTLGLLRF
: .:: : :.:: : . .: : ::.: :::.
CCDS55 EDFEAAGSPFSGGPVSFPPAPGPHFGTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGS
300 310 320 330 340 350
CCDS55 PMHSN
>>CCDS47398.2 POU5F1 gene_id:5460|Hs108|chr6 (190 aa)
initn: 553 init1: 472 opt: 536 Z-score: 501.1 bits: 100.2 E(32554): 1.4e-21
Smith-Waterman score: 545; 51.9% identity (69.7% similar) in 185 aa overlap (151-324:1-184)
130 140 150 160 170 180
pF1KB0 GILKELQQLAKELRQKRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKL
.:.:::::.:::::::::: ::: :: ::
CCDS47 MGVLFGKVFSQTTICRFEALQLSFKNMCKL
10 20 30
190 200 210 220 230
pF1KB0 RPLLKKWLKEVEA-ENLLGLCKMEMILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQ
::::.::..:.. ::: .:: : ..: : .:.: : :. ..::..: .::::: ::
CCDS47 RPLLQKWVEEADNNENLQEICKAETLVQAR-KRKRTSIENRVRGNLENLFLQCPKPTLQQ
40 50 60 70 80
240 250 260 270 280 290
pF1KB0 ISHIAGCLQLQKDVVRVWFYNRSKMGSRPTNDASPREIVGTAGPPCPGAPVCFHLG----
::::: : :.:::::::: :: . :.: ..: . :: .:: : :.:: : :.
CCDS47 ISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPLAPGPH
90 100 110 120 130 140
300 310 320
pF1KB0 LGLP-VDIPHYTRLYSA-----GVAHSSAPATTLGLLRF
.: : ::.: :::. : : . .::::
CCDS47 FGTPGYGSPHFTALYSSVPFPEGEAFPPVSVTTLGSPMHSN
150 160 170 180 190
>>CCDS14450.1 POU3F4 gene_id:5456|Hs108|chrX (361 aa)
initn: 465 init1: 465 opt: 490 Z-score: 455.8 bits: 92.8 E(32554): 4.6e-19
Smith-Waterman score: 495; 39.3% identity (62.3% similar) in 239 aa overlap (48-277:118-347)
20 30 40 50 60 70
pF1KB0 GGGPRGPMPLRVDTLTWLSTQAAPGRVMVWPAVRPGICPG--P-DVWRIP----LGPLPH
:: :.: . : .:. : : : :
CCDS14 LQLGAIIHHRSPHVAHHSPHTNHPNAWGASPAPNPSITSSGQPLNVYSQPGFTVSGMLEH
90 100 110 120 130 140
80 90 100 110 120 130
pF1KB0 EFRGWIAPCRPRLGASEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDISGILKELQQLA
: ..: .:. ::.: . . : . . : : ::.:.:
CCDS14 ---GGLTPPPAAASAQSLHPVLREPPDHGELGSHHCQDHSDEETPTSD------ELEQFA
150 160 170 180 190
140 150 160 170 180 190
pF1KB0 KELRQKRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKE
:...:.:..::..:::::.:.:.:.:.:.:::::::::: ::: :: ::.:::.:::.:
CCDS14 KQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE
200 210 220 230 240 250
200 210 220 230 240 250
pF1KB0 VEAENLLGLCKMEMILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQ
... . .. : . .:.: : . . :: : .::::. :.:: .: :::.
CCDS14 ADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLE
260 270 280 290 300 310
260 270 280 290 300
pF1KB0 KDVVRVWFYNRSKMGSR--PTNDASPREIVGTAGPPCPGAPVCFHLGLGLPVDIPHYTRL
:.:::::: :: . .: : .: .:.:.
CCDS14 KEVVRVWFCNRRQKEKRMTPPGDQQPHEVYSHTVKTDTSCHDL
320 330 340 350 360
>>CCDS30679.1 POU3F1 gene_id:5453|Hs108|chr1 (451 aa)
initn: 475 init1: 438 opt: 488 Z-score: 452.7 bits: 92.5 E(32554): 6.8e-19
Smith-Waterman score: 493; 34.0% identity (57.8% similar) in 315 aa overlap (4-293:135-439)
10 20 30
pF1KB0 MAGHRPSNHFCPLPGSGGGGPRGPMPLRVDTLT
:. . . : ::..:: . :.:: . . .
CCDS30 DGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGASGG--HQPQPLGLYAQA
110 120 130 140 150 160
40 50 60 70 80
pF1KB0 WLSTQAAPGRVMVWPAVRPGICPG------PDVWRIPLGPLPHEFRGWI--APCRPRLGA
.. : . . : : :: : . : : : : : . . :.
CCDS30 AYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHLGAHGHAHGHAHAGG
170 180 190 200 210 220
90 100 110 120 130 140
pF1KB0 SEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDISGILKELQQLAKELRQKRLSLGYSQA
.:. .:. :. : .. .: : .: :.:.::...:.:..::..::
CCDS30 LHAAAAHLHPGAGG-GGSSVGEHSDEDAPSSDD-------LEQFAKQFKQRRIKLGFTQA
230 240 250 260 270
150 160 170 180 190 200
pF1KB0 DVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEAENLLGLCKMEMI
:::.:.:.:.:.:.:::::::::: ::: :: ::.:::.:::.:... . ..
CCDS30 DVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGSPTNLDKIA
280 290 300 310 320 330
210 220 230 240 250 260
pF1KB0 LQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVRVWFYNRSK--
: . .:.: : . ..::. : .::::. ..:. .: :::.:.:::::: :: .
CCDS30 AQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKE
340 350 360 370 380 390
270 280 290 300
pF1KB0 --------MGSRPTNDA-SPREIV---GTAGPPC---PGAPVCFHLGLGLPVDIPHYTRL
: : .:. .: :. : :.:: : :. .:
CCDS30 KRMTPAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPPPPAALHHHHHHTLPGSVQ
400 410 420 430 440 450
310 320
pF1KB0 YSAGVAHSSAPATTLGLLRF
>>CCDS33265.1 POU3F3 gene_id:5455|Hs108|chr2 (500 aa)
initn: 548 init1: 449 opt: 482 Z-score: 446.7 bits: 91.6 E(32554): 1.5e-18
Smith-Waterman score: 485; 38.6% identity (63.9% similar) in 241 aa overlap (64-300:280-499)
40 50 60 70 80 90
pF1KB0 WLSTQAAPGRVMVWPAVRPGICPGPDVWRIPLGPLPHEFRGWIAPCRPRLGASEAGDWLR
: : ::. .: : :. :.. .:
CCDS33 GAQSLVHPGLVRGDTPELAEHHHHHHHHAHPHPPHPHHAQG---P--PHHGGG-GG----
250 260 270 280 290
100 110 120 130 140 150
pF1KB0 RPSEGALPGPYIALRSIPKLPPPEDISGILKELQQLAKELRQKRLSLGYSQADVGIAVGA
:: :: : : . : .. . .:.:.::...:.:..::..:::::.:.:.
CCDS33 ----GAGPG----LNS--HDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGT
300 310 320 330 340
160 170 180 190 200 210
pF1KB0 LFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEAENLLGLCKMEMILQQSGKWR
:.:.:.:::::::::: ::: :: ::.:::.:::.:... . .. : . .
CCDS33 LYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKK
350 360 370 380 390 400
220 230 240 250 260
pF1KB0 RASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVRVWFYNRSKMGSRPT----
:.: : . ..::. : .::::. :.:...: :::.:.:::::: :: . .: :
CCDS33 RTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRMTPPGI
410 420 430 440 450 460
270 280 290 300 310 320
pF1KB0 NDASPREIVGTAGPPCPGAPVCFHLGLGLPVDIPHYTRLYSAGVAHSSAPATTLGLLRF
.. .: .. . .: .: : :: :
CCDS33 QQQTPDDVYSQVGTVSADTPPPHH-GLQTSVQ
470 480 490 500
>>CCDS5040.1 POU3F2 gene_id:5454|Hs108|chr6 (443 aa)
initn: 544 init1: 448 opt: 476 Z-score: 441.9 bits: 90.5 E(32554): 2.7e-18
Smith-Waterman score: 476; 42.2% identity (70.3% similar) in 185 aa overlap (114-290:258-442)
90 100 110 120 130 140
pF1KB0 GASEAGDWLRRPSEGALPGPYIALRSIPKLPPPEDISGILKELQQLAKELRQKRLSLGYS
: .. . .:.:.::...:.:..::..
CCDS50 HPHPHSHPHQQPPPPPPPQGPPGHPGAHHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFT
230 240 250 260 270 280
150 160 170 180 190 200
pF1KB0 QADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEAENLLGLCKME
:::::.:.:.:.:.:.:::::::::: ::: :: ::.:::.:::.:... . .
CCDS50 QADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTSIDK
290 300 310 320 330 340
210 220 230 240 250 260
pF1KB0 MILQQSGKWRRASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQLQKDVVRVWFYNRSK
. : . .:.: : . ..::. : .::::. :.:. .: :::.:.:::::: :: .
CCDS50 IAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQ
350 360 370 380 390 400
270 280 290 300 310
pF1KB0 MGSR--PTNDASP--REIVGTA--GPPCPGA--PVCFHLGLGLPVDIPHYTRLYSAGVAH
.: : . . : ... : . :: :. ::
CCDS50 KEKRMTPPGGTLPGAEDVYGGSRDTPPHHGVQTPVQ
410 420 430 440
320
pF1KB0 SSAPATTLGLLRF
>>CCDS8431.1 POU2F3 gene_id:25833|Hs108|chr11 (436 aa)
initn: 424 init1: 268 opt: 429 Z-score: 399.2 bits: 82.6 E(32554): 6.5e-16
Smith-Waterman score: 434; 34.3% identity (60.7% similar) in 280 aa overlap (56-319:117-385)
30 40 50 60 70 80
pF1KB0 PLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDVWRIPLGPLPHEFRGWIAPCRPRLGA
:: . . : :.:.. : . : . :
CCDS84 DMASLHPLQQLVLVPGHLQSVSQFLLSQTQPGQQGLQPNLLPFPQQQSGLLLP---QTGP
90 100 110 120 130 140
90 100 110 120 130
pF1KB0 SEAGDWLRRPSEGALPGPYIA--LRSIPKLPPPEDI--SGI------LKELQQLAKELRQ
. :.. . .:. ::: . :.. .:: :. . :: :.::...:: ..:
CCDS84 GLASQAFGHPG---LPGSSLEPHLEASQHLPVPKHLPSSGGADEPSDLEELEKFAKTFKQ
150 160 170 180 190 200
140 150 160 170 180 190
pF1KB0 KRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEAE-
.:..::..:.:::.:.: :.:. .::::: :::: .:: :: ::.:::.:::...:.
CCDS84 RRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSP
210 220 230 240 250 260
200 210 220 230 240
pF1KB0 ---NLLGLCKMEMILQQSGKWR--RASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQL
.. .. . . :. : :.: : : .::: :: :::. ..:: :: :..
CCDS84 SDPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSM
270 280 290 300 310 320
250 260 270 280 290 300
pF1KB0 QKDVVRVWFYNRSKMGSRPTNDASPREIVGTAGPPCPGAPVCFHLGLGLPVDIPHYTRLY
.:.:::::: :: . .: . : .. :: .. . : :...: .
CCDS84 EKEVVRVWFCNRRQKEKRIN---CP--VATPIKPPVYNSRLVSPSGSLGPLSVPPVHSTM
330 340 350 360 370
310 320
pF1KB0 SAGVAHSSAPATTLGLLRF
. :. : .:
CCDS84 PGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSWYRWNHSTYL
380 390 400 410 420 430
>>CCDS58190.1 POU2F3 gene_id:25833|Hs108|chr11 (438 aa)
initn: 424 init1: 268 opt: 429 Z-score: 399.2 bits: 82.6 E(32554): 6.5e-16
Smith-Waterman score: 434; 34.3% identity (60.7% similar) in 280 aa overlap (56-319:119-387)
30 40 50 60 70 80
pF1KB0 PLRVDTLTWLSTQAAPGRVMVWPAVRPGICPGPDVWRIPLGPLPHEFRGWIAPCRPRLGA
:: . . : :.:.. : . : . :
CCDS58 DMASLHPLQQLVLVPGHLQSVSQFLLSQTQPGQQGLQPNLLPFPQQQSGLLLP---QTGP
90 100 110 120 130 140
90 100 110 120 130
pF1KB0 SEAGDWLRRPSEGALPGPYIA--LRSIPKLPPPEDI--SGI------LKELQQLAKELRQ
. :.. . .:. ::: . :.. .:: :. . :: :.::...:: ..:
CCDS58 GLASQAFGHPG---LPGSSLEPHLEASQHLPVPKHLPSSGGADEPSDLEELEKFAKTFKQ
150 160 170 180 190 200
140 150 160 170 180 190
pF1KB0 KRLSLGYSQADVGIAVGALFGKVLSQTTICRFEAQQLSVANMWKLRPLLKKWLKEVEAE-
.:..::..:.:::.:.: :.:. .::::: :::: .:: :: ::.:::.:::...:.
CCDS58 RRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSP
210 220 230 240 250 260
200 210 220 230 240
pF1KB0 ---NLLGLCKMEMILQQSGKWR--RASRERRIGNSLEKFFQRCPKPTPQQISHIAGCLQL
.. .. . . :. : :.: : : .::: :: :::. ..:: :: :..
CCDS58 SDPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSM
270 280 290 300 310 320
250 260 270 280 290 300
pF1KB0 QKDVVRVWFYNRSKMGSRPTNDASPREIVGTAGPPCPGAPVCFHLGLGLPVDIPHYTRLY
.:.:::::: :: . .: . : .. :: .. . : :...: .
CCDS58 EKEVVRVWFCNRRQKEKRIN---CP--VATPIKPPVYNSRLVSPSGSLGPLSVPPVHSTM
330 340 350 360 370
310 320
pF1KB0 SAGVAHSSAPATTLGLLRF
. :. : .:
CCDS58 PGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSWYRWNHSTYL
380 390 400 410 420 430
328 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:56:03 2016 done: Sat Nov 5 17:56:04 2016
Total Scan time: 3.140 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]