Result of FASTA (ccds) for
pF1KB0918
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0918, 331 aa
1>>>pF1KB0918 331 - 331 aa - 331 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0122+/-0.000716; mu= 13.1591+/- 0.043
mean_var=82.7759+/-16.277, 0's: 0 Z-trim(110.6): 27 B-trim: 0 in 0/51
Lambda= 0.140969
statistics sampled from 11695 (11721) to 11695 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.727), E-opt: 0.2 (0.36), width: 16
Scan time: 2.250
The best scores are: opt bits E(32554)
CCDS31975.1 PHF11 gene_id:51131|Hs108|chr13 ( 331) 2234 463.6 9.8e-131
CCDS41887.1 PHF11 gene_id:51131|Hs108|chr13 ( 292) 1981 412.1 2.7e-115
CCDS14640.1 PHF6 gene_id:84295|Hs108|chrX ( 312) 352 80.9 1.5e-15
CCDS14639.1 PHF6 gene_id:84295|Hs108|chrX ( 365) 311 72.5 5.7e-13
>>CCDS31975.1 PHF11 gene_id:51131|Hs108|chr13 (331 aa)
initn: 2234 init1: 2234 opt: 2234 Z-score: 2460.6 bits: 463.6 E(32554): 9.8e-131
Smith-Waterman score: 2234; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 QSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 KKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 VHSIPEKLMDETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VHSIPEKLMDETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEI
250 260 270 280 290 300
310 320 330
pF1KB0 ELLQDLKQTLCSFQENRDLMSSSTSISSLSY
:::::::::::::::::::::::::::::::
CCDS31 ELLQDLKQTLCSFQENRDLMSSSTSISSLSY
310 320 330
>>CCDS41887.1 PHF11 gene_id:51131|Hs108|chr13 (292 aa)
initn: 1981 init1: 1981 opt: 1981 Z-score: 2183.4 bits: 412.1 E(32554): 2.7e-115
Smith-Waterman score: 1981; 100.0% identity (100.0% similar) in 292 aa overlap (40-331:1-292)
10 20 30 40 50 60
pF1KB0 ERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIAAHE
::::::::::::::::::::::::::::::
CCDS41 MEKRTCALCPKDVEYNVLYFAQSENIAAHE
10 20 30
70 80 90 100 110 120
pF1KB0 NCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNK
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB0 NYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHV
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB0 QPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLM
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB0 DETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQT
220 230 240 250 260 270
310 320 330
pF1KB0 LCSFQENRDLMSSSTSISSLSY
::::::::::::::::::::::
CCDS41 LCSFQENRDLMSSSTSISSLSY
280 290
>>CCDS14640.1 PHF6 gene_id:84295|Hs108|chrX (312 aa)
initn: 341 init1: 257 opt: 352 Z-score: 392.4 bits: 80.9 E(32554): 1.5e-15
Smith-Waterman score: 352; 37.5% identity (72.1% similar) in 136 aa overlap (29-161:1-133)
10 20 30 40 50
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCP--KDVEYNVLY
. ..: : ..: :..: .: : . :
CCDS14 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLL
10 20 30
60 70 80 90 100 110
pF1KB0 FAQSENIAAHENCLLYSSGLVECE-DQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRG
.......:::..:.:.::.:: . :.. :. .:..:.:.:::.:: :: :..:: :
CCDS14 ISENQKVAAHHKCMLFSSALVSSHSDNESLG---GFSIEDVQKEIKRGTKLMCSLCHCPG
40 50 60 70 80
120 130 140 150 160 170
pF1KB0 ATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRK
::.:::.:.:...::. :: .: : . .::: . :..: .
CCDS14 ATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEAADLEESFNE
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB0 RGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEI
CCDS14 HELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDT
150 160 170 180 190 200
>>CCDS14639.1 PHF6 gene_id:84295|Hs108|chrX (365 aa)
initn: 376 init1: 258 opt: 311 Z-score: 346.3 bits: 72.5 E(32554): 5.7e-13
Smith-Waterman score: 352; 37.5% identity (72.1% similar) in 136 aa overlap (29-161:1-133)
10 20 30 40 50
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCP--KDVEYNVLY
. ..: : ..: :..: .: : . :
CCDS14 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLL
10 20 30
60 70 80 90 100 110
pF1KB0 FAQSENIAAHENCLLYSSGLVECE-DQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRG
.......:::..:.:.::.:: . :.. :. .:..:.:.:::.:: :: :..:: :
CCDS14 ISENQKVAAHHKCMLFSSALVSSHSDNESLG---GFSIEDVQKEIKRGTKLMCSLCHCPG
40 50 60 70 80
120 130 140 150 160 170
pF1KB0 ATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRK
::.:::.:.:...::. :: .: : . .::: . :..: .
CCDS14 ATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEH
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB0 RGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEI
CCDS14 ELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTR
150 160 170 180 190 200
>--
initn: 401 init1: 258 opt: 311 Z-score: 346.3 bits: 72.5 E(32554): 5.7e-13
Smith-Waterman score: 311; 37.5% identity (67.5% similar) in 120 aa overlap (45-160:212-330)
20 30 40 50 60 70
pF1KB0 ASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNV----LYFAQSENIAAHEN
:..: : : :.. .... ::: .
CCDS14 TSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYK
190 200 210 220 230 240
80 90 100 110 120 130
pF1KB0 CLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKN
:.:.::: :. . . .::...: .::.::...:: .: . :::.::..: : :.
CCDS14 CMLFSSGTVQLTTTSRAEFG-DFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKT
250 260 270 280 290 300
140 150 160 170 180 190
pF1KB0 YHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQ
::. :. .: : . :::::: :..:.
CCDS14 YHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQ
310 320 330 340 350 360
331 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:14:25 2016 done: Sat Nov 5 17:14:25 2016
Total Scan time: 2.250 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]