Result of FASTA (omim) for
pF1KB0918
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0918, 331 aa
1>>>pF1KB0918 331 - 331 aa - 331 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1476+/-0.000329; mu= 12.2839+/- 0.020
mean_var=87.8860+/-17.334, 0's: 0 Z-trim(117.7): 99 B-trim: 785 in 1/53
Lambda= 0.136809
statistics sampled from 29765 (29879) to 29765 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.35), width: 16
Scan time: 7.630
The best scores are: opt bits E(85289)
NP_001035533 (OMIM: 147050,600807,607796) PHD fing ( 331) 2234 450.6 2.2e-126
NP_001035534 (OMIM: 147050,600807,607796) PHD fing ( 292) 1981 400.6 2.1e-111
NP_115711 (OMIM: 300414,301900) PHD finger protein ( 312) 352 79.1 1.4e-14
NP_001015877 (OMIM: 300414,301900) PHD finger prot ( 365) 311 71.0 4.3e-12
NP_115834 (OMIM: 300414,301900) PHD finger protein ( 365) 311 71.0 4.3e-12
NP_060239 (OMIM: 611299) G2/M phase-specific E3 ub ( 706) 235 56.2 2.4e-07
XP_011535227 (OMIM: 611299) PREDICTED: G2/M phase- ( 706) 235 56.2 2.4e-07
XP_011535228 (OMIM: 611299) PREDICTED: G2/M phase- ( 667) 230 55.2 4.6e-07
XP_006718902 (OMIM: 159555,605130) PREDICTED: hist (3133) 209 51.4 3e-05
XP_011541135 (OMIM: 159555,605130) PREDICTED: hist (3166) 209 51.4 3e-05
NP_005924 (OMIM: 159555,605130) histone-lysine N-m (3969) 209 51.4 3.7e-05
NP_001184033 (OMIM: 159555,605130) histone-lysine (3972) 209 51.4 3.7e-05
XP_011541133 (OMIM: 159555,605130) PREDICTED: hist (4002) 209 51.4 3.7e-05
XP_011541132 (OMIM: 159555,605130) PREDICTED: hist (4004) 209 51.4 3.7e-05
XP_011541131 (OMIM: 159555,605130) PREDICTED: hist (4005) 209 51.4 3.7e-05
NP_001295026 (OMIM: 611299) G2/M phase-specific E3 ( 660) 197 48.7 4.2e-05
XP_016883035 (OMIM: 606834) PREDICTED: histone-lys (1703) 201 49.7 5.4e-05
XP_016883034 (OMIM: 606834) PREDICTED: histone-lys (2527) 201 49.8 7.5e-05
XP_011525863 (OMIM: 606834) PREDICTED: histone-lys (2527) 201 49.8 7.5e-05
XP_011525864 (OMIM: 606834) PREDICTED: histone-lys (2628) 201 49.8 7.7e-05
XP_016883033 (OMIM: 606834) PREDICTED: histone-lys (2685) 201 49.8 7.9e-05
NP_055542 (OMIM: 606834) histone-lysine N-methyltr (2715) 201 49.8 7.9e-05
XP_016867979 (OMIM: 606833) PREDICTED: histone-lys (3741) 172 44.1 0.0055
XP_016867978 (OMIM: 606833) PREDICTED: histone-lys (3873) 172 44.1 0.0057
XP_011514756 (OMIM: 606833) PREDICTED: histone-lys (4678) 172 44.2 0.0066
XP_011514755 (OMIM: 606833) PREDICTED: histone-lys (4904) 172 44.2 0.0069
NP_733751 (OMIM: 606833) histone-lysine N-methyltr (4911) 172 44.2 0.0069
XP_016867977 (OMIM: 606833) PREDICTED: histone-lys (4922) 172 44.2 0.0069
XP_006716142 (OMIM: 606833) PREDICTED: histone-lys (4927) 172 44.2 0.0069
XP_005250088 (OMIM: 606833) PREDICTED: histone-lys (4928) 172 44.2 0.0069
XP_011514754 (OMIM: 606833) PREDICTED: histone-lys (4932) 172 44.2 0.0069
XP_016867976 (OMIM: 606833) PREDICTED: histone-lys (4934) 172 44.2 0.0069
XP_011514753 (OMIM: 606833) PREDICTED: histone-lys (4943) 172 44.2 0.0069
XP_016867975 (OMIM: 606833) PREDICTED: histone-lys (4954) 172 44.2 0.007
XP_006716141 (OMIM: 606833) PREDICTED: histone-lys (4959) 172 44.2 0.007
XP_011514758 (OMIM: 606833) PREDICTED: histone-lys (4963) 172 44.2 0.007
XP_016867974 (OMIM: 606833) PREDICTED: histone-lys (4966) 172 44.2 0.007
XP_011514752 (OMIM: 606833) PREDICTED: histone-lys (4967) 172 44.2 0.007
XP_016867973 (OMIM: 606833) PREDICTED: histone-lys (4972) 172 44.2 0.007
XP_016867972 (OMIM: 606833) PREDICTED: histone-lys (4978) 172 44.2 0.007
XP_016867971 (OMIM: 606833) PREDICTED: histone-lys (4978) 172 44.2 0.007
XP_005250085 (OMIM: 606833) PREDICTED: histone-lys (4979) 172 44.2 0.007
XP_006716140 (OMIM: 606833) PREDICTED: histone-lys (4982) 172 44.2 0.007
XP_016867970 (OMIM: 606833) PREDICTED: histone-lys (4982) 172 44.2 0.007
XP_005250084 (OMIM: 606833) PREDICTED: histone-lys (4982) 172 44.2 0.007
XP_005250083 (OMIM: 606833) PREDICTED: histone-lys (4982) 172 44.2 0.007
XP_005250082 (OMIM: 606833) PREDICTED: histone-lys (4983) 172 44.2 0.007
XP_016867969 (OMIM: 606833) PREDICTED: histone-lys (4983) 172 44.2 0.007
>>NP_001035533 (OMIM: 147050,600807,607796) PHD finger p (331 aa)
initn: 2234 init1: 2234 opt: 2234 Z-score: 2390.0 bits: 450.6 E(85289): 2.2e-126
Smith-Waterman score: 2234; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331)
10 20 30 40 50 60
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 QSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 GCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 KKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 VHSIPEKLMDETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHSIPEKLMDETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEI
250 260 270 280 290 300
310 320 330
pF1KB0 ELLQDLKQTLCSFQENRDLMSSSTSISSLSY
:::::::::::::::::::::::::::::::
NP_001 ELLQDLKQTLCSFQENRDLMSSSTSISSLSY
310 320 330
>>NP_001035534 (OMIM: 147050,600807,607796) PHD finger p (292 aa)
initn: 1981 init1: 1981 opt: 1981 Z-score: 2121.0 bits: 400.6 E(85289): 2.1e-111
Smith-Waterman score: 1981; 100.0% identity (100.0% similar) in 292 aa overlap (40-331:1-292)
10 20 30 40 50 60
pF1KB0 ERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIAAHE
::::::::::::::::::::::::::::::
NP_001 MEKRTCALCPKDVEYNVLYFAQSENIAAHE
10 20 30
70 80 90 100 110 120
pF1KB0 NCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNK
40 50 60 70 80 90
130 140 150 160 170 180
pF1KB0 NYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHV
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB0 QPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLM
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB0 DETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DETTSESDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQT
220 230 240 250 260 270
310 320 330
pF1KB0 LCSFQENRDLMSSSTSISSLSY
::::::::::::::::::::::
NP_001 LCSFQENRDLMSSSTSISSLSY
280 290
>>NP_115711 (OMIM: 300414,301900) PHD finger protein 6 i (312 aa)
initn: 341 init1: 257 opt: 352 Z-score: 382.9 bits: 79.1 E(85289): 1.4e-14
Smith-Waterman score: 352; 37.5% identity (72.1% similar) in 136 aa overlap (29-161:1-133)
10 20 30 40 50
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCP--KDVEYNVLY
. ..: : ..: :..: .: : . :
NP_115 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLL
10 20 30
60 70 80 90 100 110
pF1KB0 FAQSENIAAHENCLLYSSGLVECE-DQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRG
.......:::..:.:.::.:: . :.. :. .:..:.:.:::.:: :: :..:: :
NP_115 ISENQKVAAHHKCMLFSSALVSSHSDNESLG---GFSIEDVQKEIKRGTKLMCSLCHCPG
40 50 60 70 80
120 130 140 150 160 170
pF1KB0 ATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRK
::.:::.:.:...::. :: .: : . .::: . :..: .
NP_115 ATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEAADLEESFNE
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB0 RGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEI
NP_115 HELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDT
150 160 170 180 190 200
>>NP_001015877 (OMIM: 300414,301900) PHD finger protein (365 aa)
initn: 376 init1: 258 opt: 311 Z-score: 338.1 bits: 71.0 E(85289): 4.3e-12
Smith-Waterman score: 352; 37.5% identity (72.1% similar) in 136 aa overlap (29-161:1-133)
10 20 30 40 50
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCP--KDVEYNVLY
. ..: : ..: :..: .: : . :
NP_001 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLL
10 20 30
60 70 80 90 100 110
pF1KB0 FAQSENIAAHENCLLYSSGLVECE-DQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRG
.......:::..:.:.::.:: . :.. :. .:..:.:.:::.:: :: :..:: :
NP_001 ISENQKVAAHHKCMLFSSALVSSHSDNESLG---GFSIEDVQKEIKRGTKLMCSLCHCPG
40 50 60 70 80
120 130 140 150 160 170
pF1KB0 ATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRK
::.:::.:.:...::. :: .: : . .::: . :..: .
NP_001 ATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEH
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB0 RGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEI
NP_001 ELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTR
150 160 170 180 190 200
>--
initn: 401 init1: 258 opt: 311 Z-score: 338.1 bits: 71.0 E(85289): 4.3e-12
Smith-Waterman score: 311; 37.5% identity (67.5% similar) in 120 aa overlap (45-160:212-330)
20 30 40 50 60 70
pF1KB0 ASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNV----LYFAQSENIAAHEN
:..: : : :.. .... ::: .
NP_001 TSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYK
190 200 210 220 230 240
80 90 100 110 120 130
pF1KB0 CLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKN
:.:.::: :. . . .::...: .::.::...:: .: . :::.::..: : :.
NP_001 CMLFSSGTVQLTTTSRAEFG-DFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKT
250 260 270 280 290 300
140 150 160 170 180 190
pF1KB0 YHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQ
::. :. .: : . :::::: :..:.
NP_001 YHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQ
310 320 330 340 350 360
>>NP_115834 (OMIM: 300414,301900) PHD finger protein 6 i (365 aa)
initn: 376 init1: 258 opt: 311 Z-score: 338.1 bits: 71.0 E(85289): 4.3e-12
Smith-Waterman score: 352; 37.5% identity (72.1% similar) in 136 aa overlap (29-161:1-133)
10 20 30 40 50
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCP--KDVEYNVLY
. ..: : ..: :..: .: : . :
NP_115 MSSSVEQKKGPTRQRKCGFCKSNRDKECGQLL
10 20 30
60 70 80 90 100 110
pF1KB0 FAQSENIAAHENCLLYSSGLVECE-DQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRG
.......:::..:.:.::.:: . :.. :. .:..:.:.:::.:: :: :..:: :
NP_115 ISENQKVAAHHKCMLFSSALVSSHSDNESLG---GFSIEDVQKEIKRGTKLMCSLCHCPG
40 50 60 70 80
120 130 140 150 160 170
pF1KB0 ATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRK
::.:::.:.:...::. :: .: : . .::: . :..: .
NP_115 ATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEH
90 100 110 120 130 140
180 190 200 210 220 230
pF1KB0 RGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEI
NP_115 ELEPSSPKSKKKSRKGRPRKTNFKGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTR
150 160 170 180 190 200
>--
initn: 401 init1: 258 opt: 311 Z-score: 338.1 bits: 71.0 E(85289): 4.3e-12
Smith-Waterman score: 311; 37.5% identity (67.5% similar) in 120 aa overlap (45-160:212-330)
20 30 40 50 60 70
pF1KB0 ASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNV----LYFAQSENIAAHEN
:..: : : :.. .... ::: .
NP_115 TSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFNAKKAAAHYK
190 200 210 220 230 240
80 90 100 110 120 130
pF1KB0 CLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKN
:.:.::: :. . . .::...: .::.::...:: .: . :::.::..: : :.
NP_115 CMLFSSGTVQLTTTSRAEFG-DFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKT
250 260 270 280 290 300
140 150 160 170 180 190
pF1KB0 YHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQ
::. :. .: : . :::::: :..:.
NP_115 YHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGKVEIDQQQLTQQ
310 320 330 340 350 360
>>NP_060239 (OMIM: 611299) G2/M phase-specific E3 ubiqui (706 aa)
initn: 214 init1: 159 opt: 235 Z-score: 252.7 bits: 56.2 E(85289): 2.4e-07
Smith-Waterman score: 235; 24.7% identity (52.9% similar) in 223 aa overlap (48-268:23-233)
20 30 40 50 60 70
pF1KB0 PEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIAAHENCLLYSSG
::. .:. .. :...: :::.:::
NP_060 MNESKPGDSQNLACVFCRKHDDCPN--KYGEKKTKEKWNLTVHYYCLLMSSG
10 20 30 40 50
80 90 100 110 120 130
pF1KB0 LVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAK
. . .. . .: .:...::..:. :::: :.: ::..:: :...::: :.
NP_060 IWQRGKEE--EGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGL
60 70 80 90 100
140 150 160 170 180 190
pF1KB0 KDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRK--KPLSGNHVQPPETM
. . . : : . .: .: ::... .. . .:. . ..
NP_060 QRECIFQ---FTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCC
110 120 130 140 150 160
200 210 220 230 240 250
pF1KB0 KCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLMDETTSE
: : :. . .. .: : :. .: . . . .:.: :::: . :
NP_060 KNAWFHRDCLQVQA--INAGV---FFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEE
170 180 190 200 210 220
260 270 280 290 300 310
pF1KB0 SDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQTLCSFQE
. :.:. . :
NP_060 NAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQNW
230 240 250 260 270 280
>>XP_011535227 (OMIM: 611299) PREDICTED: G2/M phase-spec (706 aa)
initn: 214 init1: 159 opt: 235 Z-score: 252.7 bits: 56.2 E(85289): 2.4e-07
Smith-Waterman score: 235; 24.7% identity (52.9% similar) in 223 aa overlap (48-268:23-233)
20 30 40 50 60 70
pF1KB0 PEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIAAHENCLLYSSG
::. .:. .. :...: :::.:::
XP_011 MNESKPGDSQNLACVFCRKHDDCPN--KYGEKKTKEKWNLTVHYYCLLMSSG
10 20 30 40 50
80 90 100 110 120 130
pF1KB0 LVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAK
. . .. . .: .:...::..:. :::: :.: ::..:: :...::: :.
XP_011 IWQRGKEE--EGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGL
60 70 80 90 100
140 150 160 170 180 190
pF1KB0 KDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRK--KPLSGNHVQPPETM
. . . : : . .: .: ::... .. . .:. . ..
XP_011 QRECIFQ---FTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCC
110 120 130 140 150 160
200 210 220 230 240 250
pF1KB0 KCNTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLMDETTSE
: : :. . .. .: : :. .: . . . .:.: :::: . :
XP_011 KNAWFHRDCLQVQA--INAGV---FFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEE
170 180 190 200 210 220
260 270 280 290 300 310
pF1KB0 SDYEEIGSALFDCRLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQTLCSFQE
. :.:. . :
XP_011 NAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQNW
230 240 250 260 270 280
>>XP_011535228 (OMIM: 611299) PREDICTED: G2/M phase-spec (667 aa)
initn: 214 init1: 159 opt: 230 Z-score: 247.8 bits: 55.2 E(85289): 4.6e-07
Smith-Waterman score: 230; 30.6% identity (62.0% similar) in 121 aa overlap (48-168:23-136)
20 30 40 50 60 70
pF1KB0 PEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIAAHENCLLYSSG
::. .:. .. :...: :::.:::
XP_011 MNESKPGDSQNLACVFCRKHDDCPN--KYGEKKTKEKWNLTVHYYCLLMSSG
10 20 30 40 50
80 90 100 110 120 130
pF1KB0 LVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAK
. . .. . .: .:...::..:. :::: :.: ::..:: :...::: :.
XP_011 IWQRGKEE--EGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGL
60 70 80 90 100
140 150 160 170 180 190
pF1KB0 KDDAVPQSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQPPETMKC
. . . : : . .: .: ::...
XP_011 QRECIFQ---FTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCC
110 120 130 140 150 160
200 210 220 230 240 250
pF1KB0 NTFIRQVKEEHGRHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLMDETTSESD
XP_011 KNAWFHRDCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPENKWEIKRCQCCGSS
170 180 190 200 210 220
>>XP_006718902 (OMIM: 159555,605130) PREDICTED: histone- (3133 aa)
initn: 218 init1: 179 opt: 209 Z-score: 215.2 bits: 51.4 E(85289): 3e-05
Smith-Waterman score: 259; 34.4% identity (58.1% similar) in 160 aa overlap (6-159:1007-1141)
10 20 30
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQ
:: : .: :. ..: . : : :.
XP_006 HTEQPPLMKKIIPAPKPKGPGEPDSPTPLHPPTPP-IL--STDRSREDSPELNPPPGI--
980 990 1000 1010 1020 1030
40 50 60 70 80
pF1KB0 VAEKMEKRTCALCPK--DVEYN----VLYFAQSENIAAHENCLLYSSGLVECEDQDPLNP
..: :::: : : .::..:.: .: :: :.:. . : :.:
XP_006 ----EDNRQCALCLTYGDDSANDAGRLLYIGQNE--WTHVNCALWSAEVFE--DDDG---
1040 1050 1060 1070 1080
90 100 110 120 130 140
pF1KB0 DRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVR
....:. . ::..:.:.::.: :::::: : .:..::::.:.. . : .:
XP_006 ----SLKNVHMAVIRGKQLRCEFCQKPGATVGCCLTSCTSNYHFMCSRAKNCVFLDDK--
1090 1100 1110 1120 1130
150 160 170 180 190 200
pF1KB0 GIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQPPETMKCNTFIRQVKEEHG
:. ::.:
XP_006 ---KVYCQRHRDLIKGEVVPENGFEVFRRVFVDFEGISLRRKFLNGLEPENIHMMIGSMT
1140 1150 1160 1170 1180 1190
>>XP_011541135 (OMIM: 159555,605130) PREDICTED: histone- (3166 aa)
initn: 218 init1: 179 opt: 209 Z-score: 215.2 bits: 51.4 E(85289): 3e-05
Smith-Waterman score: 259; 34.4% identity (58.1% similar) in 160 aa overlap (6-159:1040-1174)
10 20 30
pF1KB0 MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQ
:: : .: :. ..: . : : :.
XP_011 HTEQPPLMKKIIPAPKPKGPGEPDSPTPLHPPTPP-IL--STDRSREDSPELNPPPGI--
1010 1020 1030 1040 1050 1060
40 50 60 70 80
pF1KB0 VAEKMEKRTCALCPK--DVEYN----VLYFAQSENIAAHENCLLYSSGLVECEDQDPLNP
..: :::: : : .::..:.: .: :: :.:. . : :.:
XP_011 ----EDNRQCALCLTYGDDSANDAGRLLYIGQNE--WTHVNCALWSAEVFE--DDDG---
1070 1080 1090 1100 1110
90 100 110 120 130 140
pF1KB0 DRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVR
....:. . ::..:.:.::.: :::::: : .:..::::.:.. . : .:
XP_011 ----SLKNVHMAVIRGKQLRCEFCQKPGATVGCCLTSCTSNYHFMCSRAKNCVFLDDK--
1120 1130 1140 1150 1160
150 160 170 180 190 200
pF1KB0 GIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQPPETMKCNTFIRQVKEEHG
:. ::.:
XP_011 ---KVYCQRHRDLIKGEVVPENGFEVFRRVFVDFEGISLRRKFLNGLEPENIHMMIGSMT
1170 1180 1190 1200 1210 1220
331 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:14:25 2016 done: Sat Nov 5 17:14:27 2016
Total Scan time: 7.630 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]