Result of FASTA (ccds) for
pF1KB0945
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0945, 170 aa
1>>>pF1KB0945 170 - 170 aa - 170 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8216+/-0.00108; mu= 10.2782+/- 0.065
mean_var=97.7607+/-19.353, 0's: 0 Z-trim(105.8): 122 B-trim: 0 in 0/51
Lambda= 0.129716
statistics sampled from 8496 (8632) to 8496 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.265), width: 16
Scan time: 1.790
The best scores are: opt bits E(32554)
CCDS46310.1 PPP3R1 gene_id:5534|Hs108|chr2 ( 170) 1123 220.2 4.8e-58
CCDS6759.1 PPP3R2 gene_id:5535|Hs108|chr9 ( 173) 950 187.8 2.7e-48
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 302 66.5 7.8e-12
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 302 66.5 7.8e-12
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 302 66.5 7.8e-12
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 289 64.1 4.2e-11
CCDS10073.1 CHP1 gene_id:11261|Hs108|chr15 ( 195) 289 64.2 5.2e-11
>>CCDS46310.1 PPP3R1 gene_id:5534|Hs108|chr2 (170 aa)
initn: 1123 init1: 1123 opt: 1123 Z-score: 1155.5 bits: 220.2 E(32554): 4.8e-58
Smith-Waterman score: 1123; 100.0% identity (100.0% similar) in 170 aa overlap (1-170:1-170)
10 20 30 40 50 60
pF1KB0 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVID
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 IFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV
70 80 90 100 110 120
130 140 150 160 170
pF1KB0 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV
130 140 150 160 170
>>CCDS6759.1 PPP3R2 gene_id:5535|Hs108|chr9 (173 aa)
initn: 1026 init1: 950 opt: 950 Z-score: 980.4 bits: 187.8 E(32554): 2.7e-48
Smith-Waterman score: 950; 84.7% identity (92.9% similar) in 170 aa overlap (1-170:4-173)
10 20 30 40 50
pF1KB0 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQR
:::::::: ::::::: :::::::.::::::::.:::::::::::::::..::::.:
CCDS67 MSTMGNEASYPAEMCSHFDNDEIKRLGRRFKKLDLDKSGSLSVEEFMSLPELRHNPLVRR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB0 VIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK
:::.:::::.::::::::: :.::::::::.:::::::: ::::::::::::::::::::
CCDS67 VIDVFDTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDKDGYISNGELFQVLK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB0 MMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV
::::::: : ::::.:::::: ::::::.:::::: ::: :.::::.:. :
CCDS67 MMVGNNLTDWQLQQLVDKTIIILDKDGDGKISFEEFSAVVRDLEIHKKLVLIV
130 140 150 160 170
>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa)
initn: 253 init1: 176 opt: 302 Z-score: 325.9 bits: 66.5 E(32554): 7.8e-12
Smith-Waterman score: 302; 35.4% identity (68.7% similar) in 147 aa overlap (11-153:1-142)
10 20 30 40 50
pF1KB0 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQ
: ... ..: .. . :. .: :..:.....:. . . : ::: .:
CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL
.:. :.:::: .:: ::. ... :.:...: :::..: : .:::: .:: .:.
CCDS98 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 KMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV
. :..: : . ::. : .:: ::::....:::
CCDS98 TNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQMMTAK
120 130 140
>>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 (149 aa)
initn: 253 init1: 176 opt: 302 Z-score: 325.9 bits: 66.5 E(32554): 7.8e-12
Smith-Waterman score: 302; 35.4% identity (68.7% similar) in 147 aa overlap (11-153:1-142)
10 20 30 40 50
pF1KB0 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQ
: ... ..: .. . :. .: :..:.....:. . . : ::: .:
CCDS33 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL
.:. :.:::: .:: ::. ... :.:...: :::..: : .:::: .:: .:.
CCDS33 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 KMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV
. :..: : . ::. : .:: ::::....:::
CCDS33 TNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQMMTAK
120 130 140
>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa)
initn: 253 init1: 176 opt: 302 Z-score: 325.9 bits: 66.5 E(32554): 7.8e-12
Smith-Waterman score: 302; 35.4% identity (68.7% similar) in 147 aa overlap (11-153:1-142)
10 20 30 40 50
pF1KB0 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQ
: ... ..: .. . :. .: :..:.....:. . . : ::: .:
CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL
.:. :.:::: .:: ::. ... :.:...: :::..: : .:::: .:: .:.
CCDS18 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB0 KMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV
. :..: : . ::. : .:: ::::....:::
CCDS18 TNL-GEKLTDEE----VDEMIREADIDGDGQVNYEEFVQMMTAK
120 130 140
>>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 (149 aa)
initn: 308 init1: 160 opt: 289 Z-score: 312.8 bits: 64.1 E(32554): 4.2e-11
Smith-Waterman score: 289; 34.2% identity (67.8% similar) in 152 aa overlap (11-157:1-146)
10 20 30 40 50
pF1KB0 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVI
: ... ... .. . :. .: :..: ....:. . . : ::: ..
CCDS70 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELR
10 20 30 40 50
60 70 80 90 100 110
pF1KB0 DIF---DTDGNGEVDFKEFIEGVSQFSVKG-DKEQKLRFAFRIYDMDKDGYISNGELFQV
:.. : :::: ::: ::. :. ..: :.:...: :::..: : .:..: .:: .:
CCDS70 DMMSEIDRDGNGTVDFPEFL-GMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHV
60 70 80 90 100
120 130 140 150 160 170
pF1KB0 LKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVVDV
. . :..:.: . ::. : :: ::::....::: :.
CCDS70 MTRL-GEKLSDEE----VDEMIRAADTDGDGQVNYEEFVRVLVSK
110 120 130 140
>>CCDS10073.1 CHP1 gene_id:11261|Hs108|chr15 (195 aa)
initn: 436 init1: 287 opt: 289 Z-score: 311.2 bits: 64.2 E(32554): 5.2e-11
Smith-Waterman score: 431; 43.2% identity (69.8% similar) in 169 aa overlap (15-168:23-191)
10 20 30 40 50
pF1KB0 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQN
:. ..: :: .:: .:: ..:.:: :.:. .::: :
CCDS10 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN
10 20 30 40 50 60
60 70 80 90
pF1KB0 PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ---------------KLRFAFR
:: .:.:. : .:. .:.:. :.. ...: :.:. ::.::::
CCDS10 PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB0 IYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV
.::.::: :: ::.:::.:::: :..: :: .:.:.:: .::.:::. ::: :: :.
CCDS10 LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL
130 140 150 160 170 180
160 170
pF1KB0 GGLDIHKKMVVDV
.:...:: .
CCDS10 EKVDVEQKMSIRFLH
190
170 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 17:52:57 2016 done: Sat Nov 5 17:52:57 2016
Total Scan time: 1.790 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]